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Computational studies of protein structure and functionGreaves, Richard Brian January 1994 (has links)
No description available.
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Design, synthesis and biological evaluation of novel antifolates against Pneumocystis cariniiChan, David Chung Chan January 2000 (has links)
No description available.
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Computational studies of hydrophobic porphyrinsBoyett, Robin Ernest January 1994 (has links)
No description available.
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The design and synthesis of novel heterocycles as potential 5-HT receptor ligandsWishart, Grant January 1997 (has links)
The seven transmembrane α-helices of the human 5 -HT<sub>1A</sub> , 5-HT<sub>1Dα</sub> and 5-HT<sub>1Dβ</sub> receptors have been modelled using the 3-dimensional coordinates of the seven transmembrane a-helices of the bacterial protein bacteriorhodopsin as a template. The probable 5-HT binding site was identified between helices 3, 4, 5 and 6. Interactions between the natural ligand 5-HT (A) and the receptor models are described in detail and the agonist binding site is further validated by the docking of four known 5-HT receptor ligands. The models are able to account qualitatively for the receptor binding affinities of the studied ligands. Small molecule similarity studies suggest that a thieno[2,3-b]pyridine analog (B) of 5-HT could possibly act as a bio-isostere for 5-HT. This was further corroborated when (B) was docked into the 5-HT receptor models and was found to be accommodated easily in the 5-HT binding site participating in the same interactions as observed for 5-HT. Thieno[2,3-b]pyridines similar to (B) were thus identified as synthetic target compounds. Furthermore, the models were used to provide suggestions for the design of novel, more selective, 5-HT receptor agonists. The thieno[2,3-b]pyridine ester (C; R=C0<sub>2</sub>Et) was reduced to the hydroxymethyl derivative (C; R=CH<sub>2</sub>0H) but the methylthio group could not be successfully removed in the presence of the thiophene ring. Using a different approach the thieno[2,3-b]pyridine (D; R=CO<sub>2</sub>Me, X=CN) was synthesised as a model compound and converted through to the <i>t</i>-BOC protected amines (D, R=NHCO<sub>2</sub>C(CH<sub>3</sub>)<sub>3</sub>, X=CN) and (D, R=NHCO<sub>2</sub>C(CH<sub>3</sub>)<sub>3</sub> , X=CONH<sub>2</sub>). The same reactions were applied to ethyl-3-(5-cyanothieno[2,3-b] pyridin-3-yl)propanoate (E, R=CO<sub>2</sub>Et, X=CN) but this unfortunately could not be converted through to the required <i>t</i>-BOC protected 5-HT analog (E, R=NHCO<sub>2</sub>C(CH<sub>3</sub>)<sub>3</sub>, X=CN).
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Structural studies of phosphines and phosphitesEllis, Dianne D. January 1997 (has links)
No description available.
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Complexation of macrocycles with lanthanide cations : a physicochemical studyJafou, Olga January 1999 (has links)
This thesis investigates the complexing properties of synthetic macrocyclic ligands such as calix[4]arenes (L1-L6) and cryptand 222 (L7) towards lanthanide(III) cations in dipolar aprotic media (acetonitrile and N,N-dimethylformamide) at 298.15 K. Molecular modelling studies performed on calix[4]arene derivatives suggested that solvent molecules such as acetonitrile and N,N-dimethylformamide interact with the hydrophobic cavity, thus inducing conformational changes on these ligands, 'preorganising' them for complexation. 1H NMR complexation experiments established the presence of interactions between the hydrophilic cavity of calix[4]arene derivatives and the metal cations and revealed the sites of complexation of the ligands. Conductance measurements clearly demonstrated that 1:1 and 2:1 metal cation : ligand stoichiometries are found with these cations in acetonitrile. The thermodynamics of complexation of macrocyclic ligands and lanthanide(III) cations in acetonitrile and in N,N-dimethylformamide at 298.15 K was derived from titration microcalorimetry. Stability constants were also determined by the competitive potentiometric method using silver electrodes. Excellent agreement was found between the data derived from calorimetry and those derived by potentiometry. The complexation process between these cations and these ligands was enthalpically controlled for all systems studied. Enthalpy-entropy compensation effects were observed in the complexation of 5,11,17,23-tetrakis-(1,1-dimethylethyl)-25,27-bis[2-(methylthio)ethoxy]-26,28-bis[2(diethylamine)ethoxy]calix[4]arene, L1 and the different lanthanide(III) cations in acetonitrile, as well as L1, L7 and [tetrakis(N,N-diethylaminoethyl)oxyl]p-tert-butylcalix[4]arene, L2, in N,N-dimethyl formamide, as suggested by the absence of significant variations in the free energies of complexation in each case. As far as p-tert-butylcalix[4]arene tetradiisopropyl acetamide, L3, is concerned, a selective behaviour was observed for these cations in acetonitrile with the highest stabilities found for gadolinium and europium. Metal-ion complexes were isolated based on their stability and the solution thermodynamics of the free and complexed salts was investigated. Lastly, the complexation process in the two solvents was discussed, taking into account the differences in solvation of the reactants and the product in these solvents.
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Neutron and x-ray scattering study of ionomer blends (SPBT/PC)Kalhoro, Muhammad Siddique January 1999 (has links)
No description available.
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Crystallographic and modelling studies on fructose 1,6-bisphosphate adolase and its substratesDalby, Andrew Rowland January 1996 (has links)
No description available.
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The conformational analysis of small, flexible molecules using NMR of liquid crytalline solutionsFoord, Elizabeth Kate January 1996 (has links)
No description available.
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New simulation methods for the prediction of binding free energiesWall, Ian January 2000 (has links)
No description available.
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