abstract: The critical infrastructures of the nation are a large and complex network of human, physical and cyber-physical systems. In recent times, it has become increasingly apparent that individual critical infrastructures, such as the power and communication networks, do not operate in isolation, but instead are part of a complex interdependent ecosystem where a failure involving a small set of network entities can trigger a cascading event resulting in the failure of a much larger set of entities through the failure propagation process. Recognizing the need for a deeper understanding of the interdependent relationships between such critical infrastructures, several models have been proposed and analyzed in the last few years. However, most of these models are over-simplified and fail to capture the complex interdependencies that may exist between critical infrastructures. To overcome the limitations of existing models, this dissertation presents a new model -- the Implicative Interdependency Model (IIM) that is able to capture such complex interdependency relations. As the potential for a failure cascade in critical interdependent networks poses several risks that can jeopardize the nation, this dissertation explores relevant research problems in the interdependent power and communication networks using the proposed IIM and lays the foundations for further study using this model. Apart from exploring problems in interdependent critical infrastructures, this dissertation also explores resource allocation techniques for environments enabled with cyber-physical systems. Specifically, the problem of efficient path planning for data collection using mobile cyber-physical systems is explored. Two such environments are considered: a Radio-Frequency IDentification (RFID) environment with mobile “Tags” and “Readers”, and a sensor data collection environment where both the sensors and the data mules (data collectors) are mobile. Finally, from an applied research perspective, this dissertation presents Raptor, an advanced network planning and management tool for mitigating the impact of spatially correlated, or region based faults on infrastructure networks. Raptor consolidates a wide range of studies conducted in the last few years on region based faults, and provides an interface for network planners, designers and operators to use the results of these studies for designing robust and resilient networks in the presence of spatially correlated faults. / Dissertation/Thesis / Doctoral Dissertation Computer Science 2016