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迴歸分析中，若變數間有非線性(nonlinear)的關係，此時我們可以用B-spline線性迴歸，一種無母數的方法，建立模型。Penalized spline是B-spline方法的一種改良，其想法是增加一懲罰項，避免估計函數時出現過度配適的問題。本文中，考慮三種方法:(a) Marginal Mixed Model approach, (b) Conditional Mixed Model approach, (c) 貝氏方法建立信賴帶，其中，我們對第一二種方法內的估計式作了一點調整，另外，懲罰項中的平滑參數也是我們考慮的問題。我們發現平滑參數確實會影響信賴帶，所以我們使用cross-validation來選取平滑參數。在調整的cross-validation下，Marginal Mixed Model的信賴帶估計不平滑的函數效果較好，Conditional Mixed Model的信賴帶估計平滑函數的效果較好，貝氏的信賴帶估計函數效果較差。 / In regression analysis, we can use B-spline to estimate regression function nonparametrically when the regression function is nonlinear. Penalized splines have been proposed to improve the performance of B-splines by including a penalty term to prevent over-fitting. In this article, we compare confidence bands constructed by three estimation methods: (a) Marginal Mixed Model approach, (b) Conditional Mixed Model approach, and (c) Bayesian approach. We modify the first two methods slightly. In addition, the selection of smoothing parameter of penalization is considered. We found that the smoothing parameter affects confidence bands a lot, so we use cross-validation to choose the smoothing parameter. Finally, based on the restricted cross-validation, Marginal Mixed Model performs better for less smooth regression functions, Conditional Mixed Model performs better for smooth regression functions and Bayesian approach performs badly.

Profile monitoring is a relatively new approach in quality control best used when the process data follow a profile (or curve). The majority of previous studies in profile monitoring focused on the parametric modeling of either linear or nonlinear profiles under the assumption of the correct model specification. Our work considers those cases where the parametric model for the family of profiles is unknown or, at least uncertain. Consequently, we consider monitoring Poisson profiles via three methods, a nonparametric (NP) method using penalized splines, a nonparametric (NP) method using wavelets and a semi parametric (SP) procedure that combines both parametric and NP profile fits. Our simulation results show that SP method is robust to the common problem of model misspecification of the user's proposed parametric model. We also showed that Haar wavelets are a better choice than the penalized splines in situations where a sudden jump happens or the jump is edgy. In addition, we showed that the penalized splines are better than wavelets when the shape of the profiles are smooth. The proposed novel techniques have been applied to a real data set and compare with some state-of-the arts.

Indiana University-Purdue University Indianapolis (IUPUI) / A semi-parametric approach incorporates parametric and nonparametric functions in the model and is very useful in situations when a fully parametric model is inadequate. The objective of this dissertation is to extend statistical methodology employing the semi-parametric modeling approach to analyze data in health science research areas. This dissertation has three parts. The first part discusses the modeling of the dose-response relationship with correlated data by introducing overall drug effects in addition to the deviation of each subject-specific curve from the population average. Here, a penalized spline regression method that allows modeling of the smooth dose-response relationship is applied to data in studies monitoring malaria drug resistance through the ex-vivo assays.The second part of the dissertation extends the SiZer map, which is an exploratory and a powerful visualization tool, to detect underlying significant features (increase, decrease, or no change) of the curve at various smoothing levels. Here, Penalized Spline Significant Zero Crossings of Derivatives (PS-SiZer), using a penalized spline regression, is introduced to investigate significant features in correlated data arising from longitudinal settings. The third part of the dissertation applies the proposed PS-SiZer methodology to analyze HIV data. The durability of significant weight change over a period is explored from the PS-SiZer visualization. PS-SiZer is a graphical tool for exploring structures in curves by mapping areas where rate of change is significantly increasing, decreasing, or does not change. PS-SiZer maps provide information about the significant rate of weigh change that occurs in two ART regimens at various level of smoothing. A penalized spline regression model at an optimum smoothing level is applied to obtain an estimated first-time point where weight no longer increases for different treatment regimens.

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In this thesis, Bayesian semiparametric models for the missing data mechanisms of nonignorably missing covariates in logistic regression are developed. In the missing data literature, fully parametric approach is used to model the nonignorable missing data mechanisms. In that approach, a probit or a logit link of the conditional probability of the covariate being missing is modeled as a linear combination of all variables including the missing covariate itself. However, nonignorably missing covariates may not be linearly related with the probit (or logit) of this conditional probability. In our study, the relationship between the probit of the probability of the covariate being missing and the missing covariate itself is modeled by using a penalized spline regression based semiparametric approach. An efficient Markov chain Monte Carlo (MCMC) sampling algorithm to estimate the parameters is established. A WinBUGS code is constructed to sample from the full conditional posterior distributions of the parameters by using Gibbs sampling. Monte Carlo simulation experiments under different true missing data mechanisms are applied to compare the bias and efficiency properties of the resulting estimators with the ones from the fully parametric approach. These simulations show that estimators for logistic regression using semiparametric missing data models maintain better bias and efficiency properties than the ones using fully parametric missing data models when the true relationship between the missingness and the missing covariate has a nonlinear form. They are comparable when this relationship has a linear form.