Thesis (Ph. D.)--University of Texas at Austin, 2008. / Vita. Includes bibliographical references.

A espectroscopia foto-térmica tem sido largamente usada na investigação de propriedades térmicas e ópticas de materiais sólidos. Neste trabalho, desenvolvemos novas câmaras foto-térmicas as quais foram adaptadas para os estudos de materiais poliméricos. Estendemos o modelo desenvolvido por Mandelis para a espectroscopia fotopiroelétrica (PPES), incluindo nele um termo devido à reflexão de luz na interface amostra-detetor. A aplicação da técnica PPES em filmes de Poli(3-Butiltiofeno) não dopado nos permitiu obter sua condutividade e difusividade térmicas, como também seu gap de energia. Também aplicamos a técnica fotoacústica, com um flash de laser He-Ne, ao estudo de filmes de polímeros transparentes. Finalmente, desenvolvemos um método semi-empírico o qual significa a análise do sinal foto-térmico, quando ele é, principalmente, devido à difusão térmica. / Photothermal spectroscopies have been largely used in the investigation of thermal and optical properties of solids materials. In this work we developed new photothermal cells which were adapted for the study of polymerics materials. We also extended the model developed by Mandelis for the Photopyroeletric Spectroscopy (PPES), including in it a term due to the reflected light in the sample-detector interface. The application of the PPES technique in films of undopedpoly(3-butylthiophene) allowed us to obtain its thermal conductivity and diffusivity, as well as its gap energy. We also applied the photoacoustic technique, with a flash of He-Ne laser to study of transparent films of polymers. Finally we developed a semi-empiric method which simplifies the analysis of the photothermal signal, when it is mainly due to the thermal diffusion.

Downstream regulatory element antagonist modulator (DREAM) is involved in various interactions with targets both inside and outside of the nucleus. In the cytoplasm, DREAM interacts with the C-terminal fragments of presenilins to facilitate the production of β-amyloid plaques in Alzheimer’s disease. In the nucleus, Ca2+ free DREAM directly binds to specific downstream regulatory elements of prodynorphin/c-fos gene to repress the gene transcription in pain modulation. These interactions are regulated by Ca2+ and/or Mg2+ association at the EF-hands in DREAM. Therefore, understanding the conformational dynamics and stability associated with Ca2+ and/or Mg2+ binding to DREAM is crucial for elucidating the mechanisms of interactions of DREAM with DNA or presenilins. The critical barrier for envisioning the mechanisms of these interactions lies in the lack of NMR/crystal structures of Apo and Mg2+DREAM. Using a combination of fluorescence spectroscopy, circular dichroism, isothermal titration calorimetry, photothermal spectroscopy, and computational approaches, I showed that Mg2+ association at the EF-hand 2 structurally stabilizes the N-terminal alpha-helices 1, 2, and 5, facilitating the interaction with DNA. Binding of Ca2+ at the EF-hand 3 induces significant structural changes in DREAM, mediated by several hydrophobic residues in both the N- and C-domains. These findings illustrate the critical role of EF-hand 3 for Ca2+ signal transduction from the C- to N-terminus in DREAM. The Ca2+ association at the EF-hand 4 stabilizes the C-terminus by forming a cluster consisting of several hydrophobic residues in C-terminal domain. I also demonstrated that association of presenilin-1 carboxyl peptide with DREAM is Ca2+ dependent and the complex is stabilized by aromatic residues F462 and F465 from presenilin-1 and F252 from DREAM. Stabilization is also provided by residues R200 and R207 in the loop connecting a7 and a8 in DREAM and the residues D450 and D458 in presenilin-1. These findings provide a structural basis for the development of new drugs for chronic pain and Alzheimer’s disease treatments.