Spelling suggestions: "subject:"2physical anda theoretical chemistry"" "subject:"2physical ando theoretical chemistry""
81 |
Colloidal interfaces in confinementJamie, Elizabeth A. G. January 2011 (has links)
A fluid-fluid demixing colloid-polymer system provides us with an opportunity to study interfacial phenomena that cannot be observed in molecular systems due to unfavourable length and timescales. We develop such a system compatible with cells of varying dimensions, allowing us to investigate confined interfacial behaviour in real space using Confocal Scanning Laser Microscopy. The degree to which a system is affected by the sedimentation-diffusion gradient is dependent on the ratio of the suspension height to the gravitational length of the colloids. We illustrate that we may control the distance of our interface to the critical point by altering the suspension height, determining the importance of the gravitational field. Furthermore, the timescale on which the sedimentation- diffusion gradient is established is considerably longer than that of initial fluid-fluid demixing. We show that after the formation of the macroscopic interface, the system passes through a series of local mechanical equilibria on the way to achieving full equilibrium. Should the system be of sufficient height, it will pass through the gas-liquid critical point opening up new ways to study critical phenomena. The time and length scales of the fluid-fluid demixing of our system may be manipulated by altering the density and viscosity of our solvent. We exploit a slowed phase separation process to study the interplay between demixing and wetting phenomena of systems in the vicinity of a single wetting surface, and confined between two parallel plates. We demonstrate that the presence of a surface strongly affects the morphology of phase separation. The growth of the wetting layer is determined by the demixing regime of the system, and may be accelerated by hydrodynamics. The additional restriction by a second surface limits the lengthscale of coarsening domains and may further alter the mechanism of wetting layer growth.
|
82 |
Computation with photochromic memoryChaplin, Jack Christopher January 2013 (has links)
Unconventional computing is an area of research in which novel materials and paradigms are utilised to implement computation and data storage. This includes attempts to embed computation into biological systems, which could allow the observation and modification of living processes. This thesis explores the storage and computational capabilities of a biocompatible light-sensitive (photochromic) molecular switch (NitroBIPS) that has the potential to be embedded into both natural and synthetic biological systems. To achieve this, NitroBIPS was embedded in a (PDMS) polymer matrix and an optomechanical setup was built in order to expose the sample to optical stimulation and record fluorescent emission. NitroBIPS has two stable forms - one fluorescent and one non-fluorescent - and can be switched between the two via illumination with ultraviolet or visible light. By exposing NitroBIPS samples to specific stimulus pulse sequences and recording the intensity of fluorescence emission, data could be stored in registers and logic gates and circuits implemented. In addition, by moving the area of illumination, sub-regions of the sample could be addressed. This enabled parallel registers, Turing machine tapes and elementary cellular automata to be implemented. It has been demonstrated, therefore, that photochromic molecular memory can be used to implement conventional universal computation in an unconventional manner. Furthermore, because registers, Turing machine tapes, logic gates, logic circuits and elementary cellular automata all utilise the same samples and same hardware, it has been shown that photochromic computational devices can be dynamically repurposed. NitroBIPS and related molecules have been shown elsewhere to be capable of modifying many biological processes. This includes inhibiting protein binding, perturbing lipid membranes and binding to DNA in a manner that is dependent on the molecule's form. The implementation of universal computation demonstrated in this thesis could, therefore, be used in combination with these biological manipulations as key components within synthetic biology systems or in order to monitor and control natural biological processes.
|
83 |
Collisional and photoexcitation of transition metal clustersParry, Imogen Sophie January 2014 (has links)
The properties of transition metal clusters differ from those of both atomic and bulk size regimes. Such clusters are incompletely understood and potentially useful, making them attractive targets for further study. The very smallest clusters studied in this thesis (CuO, Cu<sub>2</sub> and Cu<sub>3</sub>) have been investigated with velocity map imaging. 1+1' photodissociation of CuO X <sup>2</sup>Π<sub>3/2</sub> was observed, via the C, D, E, F and H states of CuO. CuO* was photodissociated to form Cu(<sup>2</sup>D<sub>3/2</sub>) + O(<sup>1</sup>D<sub>2</sub>). D<sub>0</sub>(CuO) was determined to be 3.041±0.030 cm<sup>-1</sup>. Non-resonant three-photon Cu<sub>2</sub> photodissociation occurred throughout the energy range studied to produce one ground-state and one highly-excited copper atom,Cu*. Cu* was ionised by a single additional visible photon. Nearly all Cu* atoms with internal energies between 41000 and 53000 cm<sup>-1</sup> were observed. D<sub>0</sub>(Cu<sub>2</sub>) has been calculated to be 1.992±0.037 eV. Features arising from photodissociation of Cu<sub>3</sub> were observed in the Cu<sup>+</sup> and Cu<sub>2</sub><sup>+</sup> ion yield spectra and images. Their structure was ill-resolved due to uncertainties in the internal energy of both parent Cu<sub>3</sub> and product Cu<sub>2</sub>. These features correspond to single-photon dissociation of Cu<sub>3</sub> to produce metastable D-states of the copper atom and vibrationally excited Cu<sub>2</sub>. One series of features implies a previously-unobserved state of either Cu<sub>2</sub> or Cu<sub>3</sub>. Rh<sub>n</sub>N<sub>2</sub>O<sup>+</sup> and Rh<sub>n</sub>ON<sub>2</sub>O<sup>+</sup> (n=5, 6) were collisionally activated in collision-induced dissociation (CID) experiments with Ar and <sup>13</sup>CO. These experiments were carried out in a Fourier Transform Ion Cyclotron Resonance(FT-ICR)spectrometer. Argon collisions induced both N<sub>2</sub>O desorption and N<sub>2</sub>O reduction. The branching ratios observed reproduced those seen in prior IR-MPD experiments. <sup>13</sup>CO was observed to chemisorb to the cluster upon collision, activating not only N<sub>2</sub>O desorption and reduction but also CO oxidation. Formation of CO2 was noted to be particularly rapid on the n=5 cluster compared to the n=6 cluster. Reactions of Rh<sub>n</sub>N<sub>2</sub>O<sup>+</sup> (n=4-6) clusters were also activated by black body radiation. This technique is known as BIRD - black-body induced infrared radiative dissociation. These studies revealed that the N<sub>2</sub>O desorption barrier exceeds the N<sub>2</sub>O reduction barrier on all clusters studied, but that the entropic favourability of desorption increases its rate relative to reduction with increasing cluster internal energy. The BIRD rate was much reduced upon cooling the ICR cell to 100 K. A further test of the BIRD mechanism increased the number of N<sub>2</sub>O ligands and hence the absorption rate. An approximately linear increase in the dissociation rate of Rh<sub>n</sub>(N<sub>2</sub>O)<sub>m</sub><sup>+</sup> was observed with index m. Deviations from linearity were caused by variations in the N<sub>2</sub>O desorption rate. In the case of Rh<sub>5</sub>(N<sub>2</sub>O)<sub>m</sub><sup>+</sup>, desorption rates corresponded closely to N<sub>2</sub>O binding energies calculated by density functional theory. The system was modelled using a master equation approach.
|
84 |
Digital ion trap mass spectrometry for cold ion-molecule chemistryPollum, Laura L. January 2015 (has links)
A promising new approach for studying cold ion-molecule chemical reactions is the combination of laser- or sympathetically-cooled trapped ions and slow-moving molecules from a cold molecule source, such as a quadrupole velocity selector or a Stark decelerator. Previous reaction studies using trapped atomic ions and slow molecules from a quadrupole velocity selector were able to reach average collision energies as low as 1 K. However, the guided molecules had an approximately room temperature rotational energy distribution, so the reactions studied were not truly cold. Thus, a new molecular source for producing translationally and rotationally cold molecules utilizing buffer gas cooling and quadrupole velocity selection was constructed by K. Twyman and characterized for use in cold reaction studies. This new source of cold molecules is referred to as the buffer gas guide. A new ion trap has been designed and built for use with the existing buffer gas guide. The new ion trap apparatus is compact and mechanically compatible with this new guide. It uses a linear Paul ion trap with cylindrical electrodes to trap ions. Two optical axes (one axial and one radial) enable efficient cooling of small ion crystals. A field-free time-of-flight tube and ion detection assembly are also incorporated into the apparatus. A new technique for determining the mass and quantity of trapped ions has also been developed, termed digital ion trap mass spectrometry. The new technique uses a digital RF waveform to trap ions before ejecting the ions radially from the trap using an ejection pulse applied to the trap electrodes. The ions are then detected after free flight along a time-of-flight tube. This technique was characterized by ejecting crystals of various sizes and compositions: Ca<sup>+</sup> only, Ca<sup>+</sup>/CaF<sup> +</sup>, Ca<sup>+</sup>/CaOH<sup> +</sup>/CaOD<sup>+</sup>, and Ca<sup>+</sup>/NH<sup> +</sup><sub style='position: relative; left: -.6em;'>3</sub> /NH<sup> +</sup><sub style='position: relative; left: -.6em;'>4</sub> /H<sub>3</sub>O<sup>+</sup>. A linear relationship between the number of ions ejected (determined by comparing experimental and simulated crystal images) and the integral of the time-of-flight peak was observed for Ca<sup>+</sup> and Ca<sup>+</sup>/CaF<sup> +</sup>. All mass peaks were resolved. Simulations of the trapped ions and their trajectories through the time-of-flight tube were also performed, and excellent agreement between the simulated and experimental mass resolution was observed. Progress towards combining the buffer gas guide with the previously independent ion trap is also presented. It is anticipated that the combined buffer gas guide ion trap apparatus will enable the study of ion-molecule reactions at low temperatures with translationally and rotationally cold molecules. It is anticipated that the new digital ion trap mass spectrometry technique will simplify the study of reactions when multiple product ions whose masses are separated by only 1 AMU are formed. A new ion trap has been designed and built for use with the existing buffer gas guide. The new ion trap apparatus is compact and mechanically compatible with this new guide. It uses a linear Paul ion trap with cylindrical electrodes to trap ions. Two optical axes (one axial and one radial) enable efficient cooling of small ion crystals. A field-free time-of-flight tube and ion detection assembly are also incorporated into the apparatus. A new technique for determining the mass and quantity of trapped ions has also been developed, termed digital ion trap mass spectrometry. The new technique uses a digital RF waveform to trap ions before ejecting the ions radially from the trap using an ejection pulse applied to the trap electrodes. The ions are then detected after free flight along a time-of-flight tube. This technique was characterized by ejecting crystals of various sizes and compositions: Ca+ only, Ca+/CaF+, Ca+/CaOH+/CaOD+, and Ca+/NH+3/NH+4/H3O+. A linear relationship between the number of ions ejected (determined by comparing experimental and simulated crystal images) and the integral of the time-of-flight peak was observed for Ca+ and Ca+/CaF+. All mass peaks were resolved. Simulations of the trapped ions and their trajectories through the time-of-flight tube were also performed, and excellent agreement between the simulated and experimental mass resolution was observed. Progress towards combining the buffer gas guide with the previously independent ion trap is also presented. It is anticipated that the combined buffer gas guide ion trap apparatus will enable the study of ion-molecule reactions at low temperatures with translationally and rotationally cold molecules. It is anticipated that the new digital ion trap mass spectrometry technique will simplify the study of reactions when multiple product ions whose masses are separated by only 1 AMU are formed.
|
85 |
Rydberg ionisation into confined and discrete systemsGibbard, Jemma January 2015 (has links)
The energy levels of a hydrogen Rydberg atom approaching a metallic structure are perturbed by the image-charge interaction with the surface. At small atom-surface separations surface ionisation of the Rydberg electron can occur, whereby the electron is transferred to a metal-localised state. In previous studies investigating surface ionisation at bulk metallic surfaces, this state has been part of a conduction band; however this thesis focuses on metallic and structured surfaces where the Rydberg electron transfers into a discrete image-state or hybrid 'well-image state'. The surface ionisation of hydrogen Rydberg atoms at a Cu(100) projected band-gap surface is investigated experimentally and theoretically. Experimentally, the surface ionisation of an incident beam of hydrogen Rydberg atoms is measured by extraction of the resulting ions. Resonance-enhanced charge transfer is seen for hydrogen Rydberg states that are degenerate with copper-localised image-states. A wavepacket propagation study shows that for on-resonance states the maximum in the surface-ionisation probability is shifted away from the surface by decreasing the collisional velocity. The discrete hybrid 'well-image states' localised along the surface normal of a thin-film change energy with thin-film thickness. The interaction of hydrogen Rydberg atoms with iron thin films deposited on an insulating substrate is investigated. The preference for electron penetration along the surface normal is seen by the resonance-enhancement of charge transfer at energies where the Rydberg state and well-image state are degenerate. By changing the thickness of the thin film, by in situ depositions, the energies of the well-image state are altered and the Rydberg n-values at which resonances occur, change. At a thickness of 30-monolayer the energetic spacings between the well-image states and the Rydberg states become comparable, and the single well-image state resolution is lost. A wavepacket-propagation study investigates the interaction of a nanoparticle and low-n hydrogen Rydberg atoms. The nanoparticle has a fully confined potential which at small radii yields well-spaced, fully discrete well-image states. Resonance-enhanced charge transfer occurs when the Rydberg state and the nanoparticle well-image state energy levels are degenerate. However, when there is poor energy matching between the nanoparticle well-image state and the Rydberg atom, no charge transfer is seen i.e. surface ionisation does not occur. Overall, the work presented here demonstrates the capability of Rydberg-surface studies to identify discrete, high-lying energy levels at specific surfaces.
|
86 |
An experimental and theoretical study of the dynamics of atom-molecule scatteringEyles, Chris J. January 2010 (has links)
In this thesis, a joint experimental and theoretical study of the dynamics of atom- molecule collisions will be presented. The focus of this study will be conducted towards the precise, quantitative theoretical description of the collision dynamics in terms of the vectors <strong>k</strong>, <strong>k'</strong>, <strong>j</strong>, and <strong>j'</strong> (the incoming and outgoing relative momenta associated with the collision, and the initial and final rotational angular momentum of the target diatom respectively) that define the collision, and on the experimental measurement of these vector correlations. Chapter 1 is introductory, providing an overview of the field of reaction dynamics, and the experimental and theoretical methods that exist to treat the collisions of atoms and molecules. This work focusses on the collisions of the spherically symmetric rare gas atoms Ar and He with the open-shell heteronuclear diatomic radicals NO and OH. In particular, the fully quantum state-to-state resolved differential cross-sections for the collisions of NO(X) with Ar (reflecting the <strong>k</strong> - <strong>k'</strong> vector correlation), and the collisional cross-sections for the depolarisation of the rotational angular momenta of the NO(A) and OH(A) radicals (reflecting the <strong>j</strong> - <strong>j'</strong> vector correlation) have been determined experimentally and theoretically, and the results have been discussed and interpreted in terms of the mechanistic aspects of the collision dynamics, and the features of the potential energy surface that give rise to these. In Chapter 2, the atom-molecule systems that constitute the subject of this work will be introduced in detail. The close-coupled quantum mechanical and quasi-classical trajectory scattering calculations performed as part of this work will be discussed in greater detail, providing a greater insight into molecular scattering theory. The explicit calculation of the quantities of interest (most significantly the differential cross-section, and the tensor/depolarisation cross-sections) will be presented for the quasi-classical and quantum cases, offering the most transparent definitions of these quantities. Finally the mathematical description of the spatial probability distribution of a single vector, a pair of correlated vectors, and three correlated vectors is described in detail, including a discussion of the quantum mechanical nature of the vectors in question. Chapter 3 describes the experimental measurement of the differential cross-sections for the collisions of NO(X) with Ar. A hexapole was used to select uniquely those NO molecules in the |Ω = 0.5; j = 0.5, f> quantum state, allowing full experimental quantum state-to-state selection for the first time. A crossed molecular beam apparatus with (1+1') resonantly enhanced multi-photon ionisation detection coupled with velocity mapped ion- imaging was employed to measure the differential cross-section, and the details of the experimental set-up are provided. The accurate extraction of the true, centre of mass frame differential cross-section from the laboratory frame information yielded by the experiment is something of an involved process, and much of this Chapter will be concerned with the development of a Monte Carlo method to achieve this end. In Chapter 4, the experimental and theoretical fully quantum state-to-state resolved differential cross-sections for the collisions of NO(X) with Ar are presented, having been measured for the first time. Full resolution of the initial parity of the rotational wave- function of the NO molecule has enabled the observation of parity dependent structures within the differential cross-section, and the origin of these structures has been investi- gated, employing quasi-classical, quantum mechanical and semi-classical methods in order to elucidate the mechanism by which they arise. Chapter 5 introduces the measurement of the collisional depolarisation of the rotational angular momentum of the diatom. Rate constants for the collisional depolarisation of <strong>j</strong> were measured by monitoring the time dependence of the amplitude of Zeeman and hyperfine quantum beats in the (1+1) laser induced fluorescence decays of an ensemble of NO(A) or OH(A) radicals in the presence of a series of background pressures of a collision partner. The creation and subsequent evolution of the polarisation of <strong>j</strong> induced by the absorption of polarised laser light is described, and the magnitude of this polarisation is linked to the amplitude of the quantum beat in the laser induced fluorescence decay. The extraction of the depolarisation cross-sections from the raw experimental data is discussed, and a Monte Carlo simulation of the experiment is described to account for any additional unwanted experimental factors that may contribute to the loss of polarisation of <strong>j</strong>. A formalism is also introduced that makes use of the tensor opacities to recover spin- rotation conserving and spin-rotation changing open-shell rotational energy transfer and depolarisation cross-sections from the intrinsically closed shell quasi-classical trajectory scattering calculations. In Chapter 6, the experimentally determined collisional depolarisation cross-sections for the collisions of NO(A) with He/Ar, and of OH(A) with Ar at collision energies of 39 meV/757meV are presented along with their theoretical counterparts. The relative magnitudes of the cross-sections are rationalised in terms of the potential energy surface over which the collision takes place, and the importance of spin-rotation conserving and spin-rotation changing transitions in the depolarisation process is assessed. A detailed study of the ensemble of quasi-classical trajectories is performed to determine the character of the various atom-molecule collisions, and to identify which conditions lead to the most efficient depolarisation of <strong>j</strong>. The relative importance of the potential energy surface and the collision kinematics is also assessed at this point. The results presented in this thesis thus investigate two complementary expressions of the collision dynamics, the <strong>k</strong> - <strong>k'</strong> and <strong>j</strong> - <strong>j'</strong> vector correlations, and encompass a variety of collision partners exhibiting vastly differing collision characteristics. As such, this work serves as an illustrative overview of atom-molecule scattering dynamics, containing both experimental and theoretical reflections of the collision dynamics, and relating this information back to the fundamentals of scattering theory.
|
87 |
Charge transfer of Rydberg hydrogen molecules and atoms at doped silicon surfacesGaneshalingam, Sashikesh January 2012 (has links)
The work of this thesis focuses on the interaction of high Rydberg states of hydrogen molecules and atoms with various doped Si semiconductor surfaces with the results compared with those obtained with an atomically flat gold surface. The major part of the thesis was carried out using para-H₂ molecular Rydberg states with principal quantum number n = 17 - 21 and core rotational quantum number N⁺ = 2. Subsequently, this study was continued using H atomic Rydberg states with principal quantum number n = 29 - 34. The high Rydberg states have been produced using two-step laser excitation. For close Rydberg surface separation (< 6 n² a.u.), the Rydberg states may be ionized due to an attractive surface potential experienced by the Rydberg electron, and the remaining ion core may be detected by applying an external electric field. An efficient ion detectability method is introduced to compare the many surface ionization profiles quantitatively. The p-type doped Si surfaces enhance the detected ion-signal more than the n-type doped Si surfaces due to the presence of widely distributed positive dopant charge fields in the p-type doped Si surfaces. As the dopant density increases, the area sampled by the resultant ions becomes effectively more neutral, and the decay rate of the potential from the surface dopant charge with distance from the surface becomes more rapid. Therefore, the minimum ionization distance is also reduced with increasing dopant density. It is found that the detected ion-signal decreases with increasing dopant density of both p- and n- type doped Si surfaces. The higher-n Rydberg states have shown higher ion detectability than that of lower-n Rydberg states and this variation also becomes smaller when increasing the dopant density. Experiments involving H2 Rydberg molecules incident on various doped Si surfaces in the presence of a Stark field at the point of excitation are also presented here. The surface ionization profiles produced via both electron and ion detection schemes are measured by changing the Stark polarization. Positive surface dopant charges oppose production of backscattered electrons and negative surface dopant charges enhance the electron-signal. For the electron detection scheme, lightly doped n-type Si surfaces show higher detectability but in the case of p-type Si surfaces the more heavily doped Si surfaces give a higher detected signal. This different behaviour of the detected ion or electron signal implies a different production mechanism. Theoretical trajectory simulations were also carried out based on a new 2D surface potential model. The results qualitatively agree with the experimental results and explain the changes of the surface ionization profiles between the various dopant types and dopant densities of the Si surfaces.
|
88 |
Laser studies of chemical dynamicsGilchrist, Alexander J. January 2013 (has links)
In this thesis, resonance enhanced multiphoton ionisation (REMPI) in combination with time-of-flight mass spectrometry (TOF-MS) has been used to detect nascent photofragments resulting from the UV dissociation of a variety of small molecules. The translational anisotropy and angular momentum polarisation of these photofragments has been measured and used to elucidate the underlying photodissociation dynamics. Firstly, the photodissociation of NO<sub>2</sub> at 320nm has been investigated and the vector correlations of the nascent NO photofragments have been measured in terms of a set of semi-classical bipolar moments. The measured angular momentum alignment is found to be consistent with an impulsive model for the dissociation, with <b>μ</b> and <b>ν</b> in the same molecular plane and both preferentially perpendicular to <b>J</b>, whilst angular momentum orientation measurements provide evidence for an additional torque due to the O-N-O bond opening during dissociation. These measurements were taken using a rotationally cooled, skimmed molecular beam and significant deviations were found between the bipolar moments measured using this source and previous measurements using a rotationally hotter source. The effect of parent molecular rotations on the measured bipolar moments has been quantified and successfully used to explain these deviations. The photodissociation of Cl<sub>2</sub> has been studied in the wavelength region (320-350)nm. UV absorption in this wavelength region may result in two dissociation channels, (Cl+Cl) and (Cl+Cl*), and the angular momentum polarisation of both the Cl(<sup>2</sup>P<sub>3/2</sub>) and Cl*(<sup>2</sup>P<sub>1/2</sub>) photofragments has been measured. This angular momentum polarisation has been reported in terms of a polarisation parameter formalism which, together with the measured translational anisotropies, has been used to determine the different potential energy surfaces contributing to the dissociation process. Translational anisotropy measurements of the Cl(<sup>2</sup>P<sub>3/2</sub>) fragments have shown that, for the ground-state channel, dissociation results from a pure perpendicular transition to the C state, whilst alignment measurements show that non-adiabatic transitions to the A state are significant at large internuclear separations. The measured alignment parameters are found to be relatively constant for all dissociation wavelengths and are consistent with theoretical predictions. Translational anisotropy measurements of the Cl(2P_1/2) photofragments show that, for the excited-state channel, dissociation occurs following a mixed parallel and perpendicular excitation to the B and C states respectively and the interference between these two dissociation pathways has been shown to result in angular momentum orientation. The predissociation dynamics of the C <sup>3</sup>Π<sub>g</sub> (ν=0) and (ν=1) Rydberg states of O<sub>2</sub> has been extensively studied. The translational anisotropy and angular momentum alignment of the O(<sup>3</sup>P) and O(<sup>1</sup>D) photofragments resulting from this predissociation has been measured in terms of a polarisation parameter formalism, which has been extended for a two-photon dissociation process. Measurements have been taken at various fixed wavelengths within the two bands in order to investigate the differences in the predissociation dynamics of intermediate levels with different values of |Ω|(=0,1,2 in this case). The translational anisotropy is found to be dependent on the dissociation wavelength with the variations found to be consistent with rotational depolarisation due to the long lifetime of the excited C state. All photofragments have been found to be aligned, with the relationship between the measured O(<sup>3</sup>P) and O(<sup>1</sup>D) alignment being found to be consistent with a diabatic model of the dissociation. In addition, all photofragments are found to display coherent orientation resulting from interference between two possible two-photon absorption pathways. The measured orientation is affected by rotational depolarisation due to the long lifetime of the excited C state; once this effect is accounted for the orientation is found to be nearly constant over all dissociation wavelengths. The origin of the coherent orientation is attributed to two-photon absorption to different spin-orbit components of the C state.
|
89 |
Analysis of small volume liquid samples using cavity enhanced absorption spectroscopiesRushworth, Cathy M. January 2012 (has links)
Cavity enhanced absorption spectroscopies have earned themselves a place as one of the methods of choice for sensitive absorption measurements on gas-phase samples, but their application to liquid samples has so far been more limited. Sensitive short pathlength analysis of liquid samples is required for online analysis of microfluidic samples, which are processed in channels with dimensions of tens to hundreds of micrometres. Microfluidics is important for a range of applications including drug discovery and environmental sensing. This thesis explores the application of cavity enhanced absorption spectroscopies to short pathlength (0.010 mm to 2 mm) analysis of sub-microlitre volumes of liquids. Three experimental set-ups have been been examined. Firstly, a single-wavelength cavity ringdown (CRD) spectrometer operating at 532 nm was assembled using two 99.8% reflectivity mirrors. High optical quality flow cells with short pathlengths ranging from 0.1 mm to 2 mm were inserted into this cavity at Brewster’s angle. The detection limit of the set-up with each inserted flow cell was established using a concentration series of aqueous potassium permanganate (KMnO₄) solutions. For the 1 mm flow cell, a detection limit of 29 nM KMnO₄ or 1.4 x 10⁻⁴ cm⁻¹ was established. Several different types of microfluidic devices were also inserted into the cavity, and it was found that the losses arising from the inserted chip were highly dependent on the method of chip manufacture. The CRD set-up with inserted 1 mm flow cell was applied to the detection of two important species, nitrite and iron(II), via analyte-specific colourimetric reactions. Detection limits of 1.9 nM nitrite and 3.8 nM iron(II) were established. The second experimental set-up utilised broadband, supercontinuum light generated in a 20 m length of nonlinear photonic crystal fibre. Broadband mirrors with around 99% reflectivity over the wavelength range from 400 to 800 nm were used to form the cavity, and a miniature spectrometer was used to wavelength-resolve the time-integrated cavity output. Flow cells and microfluidic chips were inserted into the cavity either at normal incidence or at Brewster’s angle. This set-up was employed for reaction analysis of an iron complexation reaction with bathophenanthroline, and for a model organic reaction, the Diels-Alder reaction between anthracene and 4-phenyl-1,2,4-triazoline-3,5-dione. The same broadband set-up was also used for pH measurements using bromocresol green indicator solution. Using dual-wavelength CRD spectroscopy, the pH sensitivity was established to be around a few milli pH units. Finally, an alternative type of cavity, formed from a loop of optical fibre has been investigated. A novel light-coupler was designed and fabricated in 365 μm core diameter multimode optical fibre. Sample designs employing both direct and evanescent wave absorption were investigated in small-core and large-core optical fibres, and the lowest detection limit of 0.11 cm⁻¹ was determined in direct absorption measurements, with a pathlength of 180 μm, using our novel light coupler in 365 μm core diameter optical fibre.
|
90 |
Simulation studies of recombination kinetics and spin dynamics in radiation chemistryAgarwal, Amit January 2011 (has links)
Radiation chemistry is concerned with understanding the chemical kinetics following the application of ionising radiation. There are two main methods for modelling recom- bination and spin dynamics in radiation chemical systems: The Monte Carlo random flights algorithm, in which the trajectories of the diffusing species are followed ex- plicitly and the Independent Reaction Times (IRT) algorithm, where reaction times are sampled from appropriate marginal distribution functions. This thesis reports develop- ments to both methods, and applies them to better understand experimental findings, particularly spin relaxation effects. Chapter 4 introduces current simulation techniques and presents newly developed algorithms and simulation programs (namely Hybrid and Slice) for modelling spatially dependent spin effects. A new analytical approximation for accurately treating ion-pair recombination in low-permittivity solvents in also presented in this chapter. Chapter 5 explores the photodissociation of H₂O₂, where there is some controversy in the literature on the spin state of the precursor. This chapter explores the possibility of reproducing the observed spin polarisation phase using the Radical Pair Mechanism. Chapter 6 presents two new algorithms for treating reactive products in the IRT framework. These have been tested for two chemical systems: (i) photodissociation of H₂O₂ where the ·OH are scavengeable; (ii) water photolysis which produces H⁺, ·OH and e⁻_<sub>aq</sub>. In the latter case a careful handling of three body correlations is required. Chapter 7 presents simulation results which suggest a strong correlation between scavenging and ion recombination in low permittivity solvents. A path decomposition method has been devised that allows IRT simulations to be corrected for this effect. Chapter 8 presents evidence for spin-entanglement and cross-recombination to act as an extra source of relaxation for ion-recombination in low permittivity solvents. It is hypothesised this effect contributes to the anomalous relaxation times observed for certain cyclic hydrocarbons. Chapter 9 presents an extension of the IRT simulation method to micelles. The kinetics are shown to be accurately described using the mean reaction time and the exponential approximation.
|
Page generated in 0.1146 seconds