Thesis (MSc.) (Physics) --University of Limpopo, 2007 / Molecular dynamics simulations have been carried out in order to examine the mechanism of diffusion of molecules in amorphous polymer matrix. PDMS model was folded in to a periodic cell, generated by rotational isomeric state (RIS) method at a prescribed temperature and density. Molecular dynamics was used to study transport properties of cyclic PDMS oligomers (hexa-methylcyclotrisiloxane (D3), octa-methylcyclotetrasiloxane (D4) and deca-methylcyclopentasiloxane (D5) using Dreiding and COMPASS force fields. Diffusion coefficients were calculated from the Einstein relation. Only D3 penetrant reached the long time limit from which the Einstein relation is satisfied. Analysis of displacement versus time for all the penetrants in PDMS matrix indicates that the penetrant motion is characterized by relatively long periods interspersed with fairly long and small jumps. Transport of solvent molecules occurs by jumps between individual sections of free volume (cavity/hole) through temporarily open channels. / The National Research Foundation (NRF) and Eskom

Incident ions, from a Van de Graaff accelerator, in the MeV energy range, deposit their energy into the near surface of a sample. This, in turn, causes atomic, molecular, cluster and fragment ion species to be desorbed and ionized, while simultaneously emitting characteristic elemental X-rays. The multielemental X-rays provide qualitative elemental information, which may be deconvoluted and fit to a theoretical X-ray spectrum, generated by a quantitative analysis program, GUPIX, while the atomic, molecular, cluster, and fragment ion species are identified using a quadrupole mass spectrometer. This methodology directly links elemental determinations with chemical speciation.The development of this particle desorption ionization particle induced X-ray emission mass spectrometer, the PDI-PIXE-MS (or PIXE-MS) instrument, which has the ability to collect both qualitative multielemental X-rays and mass spectral data is described. This multiplexed instrument has been designed to use millimeter-sized MeV particle beams as a desorption ionization (PDI) and X-ray emission (PIXE) source. Two general methods have been employed, one simultaneous and the other sequential. Both methods make use of a novel X-ray/ion source developed for use with the quadrupole mass spectrometer used in these experiments. The first method uses a MeV heavy ion particle beam, typically oxygen, to desorb and ionize the sample, while simultaneously producing characteristic multielemental X-rays. The resulting molecular, cluster, and fragment ions are collected by the mass spectrometer, and the X-rays are collected using a Si-PIN photodiode detector in conjunction with a multichannel analyzer (MCA). Heavy ions of N+, O+, O+2, Ar+, and Kr+ have been investigated, although heavy ion X-ray and mass spectra have focused on the use of oxygen particle beams. The second method is performed by first collecting the X-ray data with a MeV ion beam of He+ ions, then desorbing and ionizing the sample species with a MeV particle beam of heavy ions, producing good ion yields, for mass spectral data collection. The potential development of a scanning microprobe instrument, that would provide micron-scale, imaged, multielemental, and molecular and fragment ion chemical information is being investigated through the development of this prototype PIXE-MS instrument.