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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Proton-coupled electron transfer and tyrosine D of phototsystem II

Jenson, David L. Jenson 11 August 2009 (has links)
EPR spectroscopy and isotopic substitution were used to gain increased knowledge about the proton-coupled electron transfer (PCET) mechanism for the reduction of the tyrosine D radical (YD*) in photosystem II. pL dependence (where pL is either pH or pD) of both the rate constant and kinetic isotope effect (KIE) was examined for YD* reduction. Second, the manner in which protons are transferred during the rate-limiting step for YD* reduction at alkaline pL was determined. Finally, high field electron paramagnetic resonance (EPR) spectroscopy was used to study the effect of pH on the environment surrounding both the tyrosine D radical and the tyrosine Z radical (YZ*). At alkaline pL, it was determined that the proton and electron are both transferred in the rate-limiting step of YD* reduction. At acidic pL, the proton transfer occurs first followed by electron transfer. Proton inventory experiments indicate that there is more than one proton donation pathway available to YD* during PCET reduction at alkaline pL. Additionally, the proton inventory experiments indicate that at least one of those pathways is multiproton. High field EPR experiments indicate that both YD* and YZ* are hydrogen bonded to neutral species. The EPR gx component for YD* is invariant with respect to pH. Analysis of the EPR gx component for Yz* indicates that its environment becomes more electropositive as the pH is increased. This is most likely due to changes in the hydrogen bond strength
2

A Comparative Study on the Hydrolysis of Acetic Anhydride and N,N-Dimethylformamide: Kinetic Isotope Effect, Transition-State Structure, Polarity, and Solvent Effect

Cooper, William C., Chilukoorie, Abhinay, Polam, Suhesh, Scott, Dane, Wiseman, Floyd 01 December 2017 (has links)
Recent studies have shown that general-base assisted catalysis is a viable mechanistic pathway for hydrolysis of smaller anhydrides. Therefore, it is the central purpose of the present work to compare and contrast the number of hydrogen atoms in-flight and stationary in the transition state structure of the base-catalyzed mechanisms of 2 hydrolytic reactions as well as determine if any solvent effects occur on the mechanisms. The present research focuses on the hydrolytic mechanisms of N,N-dimethylformamide (DMF) and acetic anhydride in alkali media of varying deuterium oxide mole fractions. Acetic anhydride has been included in this study to enable comparisons with DMF hydrolysis. Comparative studies may give synergistic insight into the detailed structural features of the activated complexes for both systems. Hydrolysis reactions in varying deuterium oxide mole fractions were conducted in concentrations of 2.0M, 2.5M, and 3.0M for DMF and 0.10M for acetic anhydride at 25°C. Studies in varying deuterium mole fractions allow for proton inventory analysis, which sheds light on the number and types of hydrogen atoms involved in the activated complex. For these systems, this type of study can distinguish between direct nucleophilic attack of the hydroxide ion on the carbonyl center and general-base catalysis by the hydroxide ion to facilitate a water molecule attacking the carbonyl center. The numerical data are used to discuss 3 possible mechanisms in the hydrolysis of DMF.

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