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Interaktionen der Replikationsproteine der Maus / Interactions of the replicationproteins from mouseJehle, Margot January 2002 (has links) (PDF)
Zusammenfassung Die Initiation der DNA-Replikation in Eukaryonten ist ein hochkonservierter Prozeß, der in drei Stufen unterteilt werden kann. Im ersten Schritt bindet der ORC-Komplex an Replikationsorigins in chromosomaler DNA, wodurch die Assemblierung des präreplikativen Komplexes an den Origins ausgelöst wird. Anschließend lagern sich CDC6- und RLF-B/CDT1-Protein an den ORC an, die beide schließlich für die Rekrutierung des heterohexameren MCM-Komplexes verantwortlich sind. Durch die Aktivität der CDC7/DBF4-Kinase wird der Origin lizensiert, nachdem der letzte Initiationsfaktor CDC45 die Assemblierung des pre-RC vervollständigt hat. Ein Ziel dieser Arbeit war es, das komplexe Netzwerk von Protein-Proteininteraktionen zwischen den verschiedenen Initiationsproteinen durch Two-Hybrid-Studien aufzuklären. Dazu wurden die cDNAs aller bisher in Mus musculus charakterisierten Initiationsproteine, wie ORC1-6, CDC6, MCM2-7, CDC7, DBF4, CDC45, der "polo like kinase" CDC5/PLK, des DNA-Einzelstrang-bindenden Replikationsproteins RPA mit seinen Untereinheiten RPA14, RPA32, RPA70 und schließlich des heterodimeren Proteins Ku mit den Untereinheiten Ku80 und Ku70 jeweils in zwei verschiedene Hefevektoren inseriert. Zum einen handelt es sich dabei um den Ködervektor pEG202 und andererseits um den Beutevektor pJG4-5 des Two-Hybrid-Systems. Dabei wurden alle möglichen Köder-/Beute-Proteinkonstellationen auf eine Aktivierung des Reportergens LacZ hin untersucht und so zahlreiche Protein-Proteininteraktionen identifiziert. Einige der hier beschriebenen Wechselwirkungen waren auch in anderen Spezies identifiziert worden und konnten somit für Maus bestätigt werden. Im Rahmen dieser Two-Hybrid-Untersuchungen wurden allerdings auch erstmals neue Protein-Proteininteraktionen nachgewiesen, wie beispielsweise CDC5/PLK mit MCM2 oder Ku80 mit ORC1, -2, -4 und -5. Sowohl von CDC5/PLK- als auch von Ku80-Protein wurde vermutet, daß sie im Zusammenhang mit der Initiation der DNA-Replikation stehen könnten. Die Two-Hybrid-Interaktionen hier vermittelten neue Indizien, die diese Vermutung untermauern. Im zweiten Teil dieser Arbeit wurden fünf CDC7-Deletionsmutanten konstruiert, um die Interaktionsdomänen des CDC7-Proteins mit anderen Proteinen im Rahmen des Two-Hybrid-Systems bestimmen zu können. Die Mutanten wurden dazu jeweils in den pEG202- und den pJG4-5-Hefevektor inseriert. Die Hefe-Studien wurden nur mit denjenigen Proteinen durchgeführt, mit denen das CDC7-Wildtyp-Protein im ersten Teil der Arbeit positive Interaktionen eingegangen war. Auffallend bei den Untersuchungen mit den Deletionsmutanten war, daß sie in der Köderposition mehr Interaktionen eingingen als in der Beuteposition. Nur die C1-, C2- und N2-Mutante gingen noch Wechselwirkungen mit einigen Initiatorproteinen ein, während weder die C2- noch die N1-Mutante dazu in der Lage waren. Als Resultat dieser CDC7-Interaktionsdomänenkartierung stellte sich das Kinase-Insert II als ein für die Mehrheit der Protein-Proteininteraktionen des CDC7-Proteins zentrales Element heraus. Ein weiterer Aspekt dieser Arbeit war es, paradigmatisch einzelne Protein-Proteininteraktionen, die in den Two-Hybrid-Studien aufgefunden worden waren, mittels einer zweiten Methode zu analysieren. Zusätzlich sollte die Zellzyklusabhängigkeit einzelner Interaktionen der an der Initiation der DNA-Replikation beteiligten Proteine untersucht werden. Dazu wurden Immunpräzipitationsversuche mit synchronisierten FM3A-Mauszellen durchgeführt. Die in Suspensionskultur kultivierten Mauszellen wurden mit Mevastatin in früher G1-, mit Mimosin in G1/S-, mit Hydroxyharnstoff in der S- und mit Nocodazol in der Mitose arretiert. Ausgangsbasis für die weiteren IP-Experimente waren aus den FM3A-Zellen präparierte Kernextrakte. Folgende Antikörper wurden zur Inkubation mit Kernextrakten verwendet: gegen ORC1-, ORC2-, ORC3-, ORC5-, ORC6-, CDC6-, MCM2-, MCM7- und DBF4 gerichtete Antikörper. Mit allen genannten Antikörpern konnten Immunpräzipitationen zwischen einzelnen ORC-Untereinheiten, CDC6- und ORC-Proteinen, einzelnen MCM-Untereinheiten und ORC2- bzw. CDC6-Protein und zwischen der regulatorischen Untereinheit der DDK-Kinase DBF4 und einigen ORC-Untereinheiten nachgewiesen werden. Ein großer Teil der IPs trat in zellzyklusunabhängiger Weise auf, während ein kleinerer Anteil Zellzyklusabhängigkeit zeigte, wie beispielsweise die CDC6-ORC2-Wechselwirkung, die nur von der frühen bis zur späten G1-Phase beobachtet werden konnte. Im vierten und letzten Abschnitt dieser Arbeit ging es um die Identifizierung eines Maus-EST-Klones für das CDT1-Gen. Das CDT1-Protein ist essentieller Bestandteil der Initiation der DNA-Replikation und sorgt gemeinsam mit dem CDC6-Protein für die Rekrutierung des MCM-Komplexes an den Origin, wodurch der präreplikative Komplex für die anstehende Initiation der DNA-Replikation lizensiert wird. Der vollständige Maus-EST-Klon wurde mittels einer Sonde durch radioaktive Hybridisierung einer cDNA-Bibliothek von 9 Tage alten Mausembryonen identifiziert und charakterisiert. Die vollständige Sequenz von MmCDT1 ergab einen offenen Leserahmen von 1673bp und kodiert für ein Protein mit 557 Aminosäuren und einer Molmasse von 61.5 kDa. / Summary The initiation of DNA replication is a highly conserved process which is subdivided into three steps. The first step is the binding of the origin recognition complex to the replication origins in chromosomal DNA which triggers off the assembly of the prereplicative complex at the origins. Subsequently the CDC6 and the RLF-B/CDT1 proteins bind to ORC which are both responsible for the recruitment of the heterohexameric MCM complex to the prereplicative complex (pre-RC). The CDC7/DBF4 kinase licenses the origin after completion of the pre-RC by binding of the CDC45 protein. One task of this work was to dissolve the complex network of protein-protein interactions between the different initiator proteins with the method of the two-hybrid-system. Therefore the cDNAs encoding all described initiator proteins of Mus musculus, ORC1-6, CDC6, MCM2-7, CDC7, DBF4, CDC45, the "polo like kinase" CDC5/PLK, the single-stranded replication protein RPA with its subunits RPA14, RPA32 and RPA70 as well as the heterodimeric Ku protein with the Ku70 and the Ku80 subunits were inserted into the two-hybrid vectors pEG202 and pJG4-5. All possible bait/prey protein combinations were tested for the activation of the LacZ reporter gene. Numerous protein-interactions were detected which have been described already in other species and were confirmed here for the mouse system. There were also new protein-protein interactions observed, for example the interaction between the CDC5/PLK protein and the MCM2 protein or between the Ku80 subunit and the ORC1, 2, 4 and 5 proteins. Both the CDC5/PLK and the Ku80 protein are thought to be involved in the initiation of DNA replication. The demonstrated protein interactions provide evidence for this hypothesis. In the second part of this work five deletion mutants of the CDC7 protein were constructed to determine the interaction domains relevant for protein interactions with other proteins in the two-hybrid system. The mutants were inserted into the vectors pEG202 and pJG4-5. Only those proteins were tested for interaction with the CDC7 deletion mutants which have already shown interactions with the wild-type CDC7 protein. Proteins in the bait position showed much more interactions as proteins in the prey position. Protein interactions were observed with the C1, C2 and the N2 mutants whereas the C3 and the N1 mutants were not able to interact with any of the initiator proteins. The kinase-insert II was shown to be a central element for the majority of the protein-protein interaction of the CDC7 protein, possibly being responsible for most of the CDC7 interactions. Further task was the analysis of some paradigmatically chosen protein-protein interactions obtained in the two-hybrid studies with the help of a second experimental method, i.e. the immunoprecipitation technique. Additionally the cell cycle dependence some of the interactions involved in the initiation of DNA replication was examined. Immunoprecipitation experiments were performed with synchronized mouse FM3A cells which were arrested in early G1 phase by mevastatin, at the G1/S transition by mimosine, in S phase by hydroxyurea and in mitosis by nocodazol. Nuclear extracts made from the FM3A cells were used for the immunoprecipitations. The following antibodies were used for incubation with the nuclear extracts: antibodies raised against ORC1, ORC2, ORC3, ORC5, ORC6, CDC6, MCM2, MCM7 and DBF4, respectively. Immunoprecipitations were found among some of the ORC subunits, CDC6 and ORC proteins, some MCM subunits and ORC2 and CDC6 proteins, respectively, as well as among the regulatory subunit DBF4 of the DDK kinase and some of the ORC subunits could be demonstrated with all the above mentioned antibodies. Most of the immunoprecipitations were found to be cell cycle-independent, whereas only some of them were cell cycle-dependent. For example the CDC6-ORC2 interaction which was only observed from early G1 phase to the G1/S transition. The last part of this work was the identification of a mouse EST clone for the CDT1 gene. The CDT1 protein together with CDC6 is essential for loading MCM2-7 proteins into prereplicative complexes during replication licensing. Screening a cDNA library of 9 days old mouse embryos with a radioactive labeled probe resulted in the complete mouse EST clone of CDT1. The full length sequence of MmCDT1 revealed an open reading frame encoding a predicted protein of 557 amino acids with a molecular mass of 61.5 kDa.
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Regulation of tubulin gene expression in sea urchin embryosGong, Zhiyuan. January 1987 (has links)
No description available.
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The regulation of megakaryocyte-specific genes by Fli-1 and GATA-1Eisbacher, Michael, School of Medical Science, UNSW January 2003 (has links)
The successive activation of tissue-specific genes during cellular differentiation is orchestrated by the formation of transcriptional complexes consisting of cellspecific and ubiquitous transcription factors. Understanding the molecular events associated with normal megakaryocyte (Mk) differentiation is an issue of central importance to haematology. The aims of this study were therefore to: (i) define the transcription factors responsible for regulating the expression of Mkspecific genes such as Glycoprotein IX, (ii) identify the protein partners of such important Mk-regulatory transcription factors and (iii) examine the mechanisms utilised by these factors to regulate gene expression. First, the regulatory elements in the GPIX promoter required for basal and inducible expression were examined in megakaryoblastic Dami cells stimulated to undergo differentiation. The resulting data suggested that an Ets site in the GPIX promoter binding the Ets-family member Fli-1 was crucial in regulating both constitutive and inducible GPIX expression. Second, a two-hybrid screen of a K-562 cDNA library was used to identify transcription factors that interacted with Fli-1 and were potential regulators of Mk development. Results of this screen identified a novel protein-protein interaction with GATA-1, a previously well-characterised zinc finger transcription factor also implicated in erythroid and Mk development. Mapping of the domains required for the interaction show that the zinc fingers of GATA-1 interact with the Ets domain of Fli-1. The biological significance of the Fli-1/GATA-1 interaction was demonstrated in transient transfection assays, which resulted in synergistic activation of Mkspecific promoters. Analysis of Fli-1 and GATA-1 expression in a series of erythroleukaemic and megakaryoblastic cell lines demonstrated that the Fli- 1/GATA-1 combination correlates with a Mk-phenotype. Moreover, expression of Fli-1 in K-562 cells (a line rich in GATA-1 but normally lacking Fli-1) induces endogenous GPIX expression. Quantitative mobility shift assays reveal that Fli- 1 and GATA-1 exhibit cooperative DNA-binding in which the binding of GATA-1 to DNA is increased approximately 26 fold in the presence of Fli-1. This data provides a mechanism for the observed transcriptional synergy. In conclusion, this work suggests that Fli-1 and GATA-1 work together through protein-protein interaction and cooperative DNA-binding to activate the expression of genes associated with the terminal differentiation of Mks.
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The Effect of jersey type on thermoregulatory responses during exercise in a warm humid environment.Meir, Rudi A, mikewood@deakin.edu.au January 1992 (has links)
The thermoregulatory responses of subjects wearing two different forms of rugby league jersey, one with plastic sponsorship recognition and numbering (trial Gl) and one without (trial G2), and a lightweight alternative (trial G3), were compared with a trial without any form of upper body garment (trial GO). Ten male volunteers, mean age 20.9 (±2.3) years, height 179.8 (±4.7) cm, weight 80.2 (±8.9) kg, and body surface area 1.99 (±0.13) m2, participated in this study. Subjects had a mean maximal oxygen uptake capacity of 56.0 (±6.3) ml.kg.min-1 and a sum of 8 skinfolds of 80.6 (±23.8) mm. Subjects were exercised at approximately 50% of maximal oxygen uptake in a warm humid environment for 50 minutes. Mean ambient temperature was 27.6°C (±0.32) with a relative humidity of 64.7% (±1.44). Measurements of core and skin (7 sites) temperature, heart rate, oxygen uptake, plasma volume, peak lactate concentration, and pre- and post-trial body weight, hematocrit and garment weight were recorded.
The statistical results showed that all subjects experienced significant (p ≤.0001) decreases in body weight representing a percentage decrease ranging from 1.2-1.3%. No significant difference was found between trials with respect to body weight change. No significant effect of garment type was found on pre- and post-trial hematocrit, plasma volume changes or peak blood lactic acid concentration. However, mean peak lactate was highest for trial Gl (5.6 mmol.L-1 ±2.2) and lowest for trial G3 (4.6 mmol.L-1 ±1.27). Post-trial core temperature was significantly (p≤ .0001) higher than the resting value; no significant difference was found between trials. The mean absolute increase for all experimental trials was 0.9°C. A significant (p≤.005) difference between mean total (7 sites) skin temperature was found with a post-hoc test revealing that trials Gl and G2 were significantly higher than trial GO; no significant difference was found when comparing trial G3 with trial GO or when comparing the garments between each other. Mean skin temperature under the garment (4 sites) was found to be significantly (p≤.05) higher for all trials involving a garment when compared with mean skin temperature outside (3 sites) the garment; no significant difference was found between trials. Mean oxygen uptake was significantly different between trials (p≤.005), with trial Gl and G3 found to be significantly lower than trial GO; no difference was found when comparing the garments with each other. Post-trial garment weights were significantly (p≤.001) heavier than pre-trial and were significantly (p≤.0001) different when compared with each other.
There was no significant effect on heart rate, haematocrit, plasma volume changes, peak blood lactic acid concentration, or core temperature due to garment type. However, differences in skin temperature suggest that the garment used in trial G3 may have a benefit. Further research should consider the impact of increased exercise intensity and/or environmental temperature and humidity on the measured parameters while wearing the garments described in this study.
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Regulation des Shikimatstoffwechsels der europäischen Buche (Fagus sylvatica L.) unter dem Einfluss von OzonBetz, Gunter Andreas. Unknown Date (has links)
München, Techn. University, Diss., 2006.
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The role of aberrant gene promoter methylation in multiple myelomaChim, Chor-sang, James. January 2006 (has links)
Thesis (Ph. D.)--University of Hong Kong, 2006. / Title proper from title frame. Also available in printed format.
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Regulation of inositol phospholipid hydrolysis by extended treatment with angiotensin II in human aortic smooth muscle cellsNiibori, Yoshiko 06 March 2003 (has links)
Long-term stimuli of many systems leads to decreased cellular
responsiveness, or desensitization. We characterized the desensitization of
angiotensin II (Ang 11)-mediated inositol phospholipid (IP) hydrolysis in cultured
human aortic smooth muscle cells (HASMC). Although it has been suggested that
the desensitization induced by long-term Mg II exposure may result partially from
down-regulation of Ang II receptor, this is not sufficient to explain fully
desensitization in many systems. Post-receptor desensitization of IP hydrolysis
may also result from phosphorylation or changes in protein levels of the effector
enzyme, PLC-β. We identified the major PLC-β isoenzymes expressed by
HASMC as PLC-β1 and PLC-β3. Ang II pretreatment reduced IP accumulation
induced by Ang II (1μM) in a time-dependent manner. Phorbol ester-12-myristrate-13-acetate (PMA), a protein kinase C (PKC) activator, also reduced
Ang II-stimulated IP accumulation. These results suggest that PKC activation may
negatively regulate Ang II-stimulated IP signaling in HASMC, similar to rat cells.
In addition, PKC also reduced IP accumulation stimulated by A1F₄⁻, directly
activating the G protein. It suggests that the majority of PKC-induced
desensitization of Ang II-stimulated IP signaling occurs downstream of the Ang II
receptor in HASMC. However, both PLC-β1 and PLC-β3, expected candidates for
PKC phosphorylation, were phosphorylated independently of PKC activation or
inhibition, indicating that PKC might not be involved in direct phosphorylation of
PLC-β1 and PLC-β3. Furthermore, PLC-β1, but not PLC-β3, was highly
phosphorylated under basal conditions, suggesting that PLC-β1 and PLC-β3 may
play different roles in IP signaling in HASMC. / Graduation date: 2003
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Topology and dynamics of an artificial genetic regulatory network model /Kuo, P. Dwight, January 2005 (has links)
Thesis (M.Sc.)--Memorial University of Newfoundland, 2005. / Bibliography: leaves 87-102.
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A review of regulatory system of the Hong Kong travel industryHo, Chee-ying, Kitty. January 2006 (has links)
Thesis (M. P. A.)--University of Hong Kong, 2006. / Title proper from title frame. Also available in printed format.
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Investigations on the Mechanism of Allosteric Activtion of Rabbit Muscle Glycogen Phosphorylase b by AMPBigley, Andrew N. 2009 May 1900 (has links)
Much work has been carried out on glycogen phosphorylase over the last seventy years. Interest has persisted due not only to the usefulness of phosphorylase as a model system of allostery, but also due to the connection to the disease state in type II diabetes. The bulk of research consists of structural studies utilizing the wild-type enzyme from rabbit muscle. In this study we have employed linkage analysis in combination with structural perturbations via site-directed mutagenesis to test kinetic models of activation of phosphorylase b by AMP, and to examine the roles of the N-terminus, the acidic patch, ?-helix 1 and the 280?s loop in activation by AMP. Experiments have been carried out on purified glycogen phosphorylase b variants to determine the effects of perturbations in vitro. The kinetic models of activation by AMP are found to be a relatively accurate description of kinetic behavior of wild-type phosphorylase b, but are found to be technically incorrect with respect to the absolute requirements of two equivalents of AMP to be bound prior to catalysis. Phosphorylase b demonstrates activity in the absence of AMP, though only at high concentrations of phosphate, and a hybrid phosphorylase b with only a single functional AMP binding sight shows slight activation. The truncate ?2-17 shows weakened binding to AMP and phosphate in the apo enzyme, but maintains activation by AMP to an affinity similar to that of wild-type, indicating that the N-terminus is not required for activation by AMP, but has a role in establishing the affinity for both AMP and phosphate in the apo enzyme. Perturbations of the acidic patch indicate that interactions between the acidic patch and the N-terminus enhance the affinities in the apo enzyme, suggesting that the structures of the N-terminus at the acidic patch may represent an active form of the enzyme. ?-helix 1 is found to have a role in homotropic cooperativity in phosphorylase b, but not in heterotropic activation by AMP, while the 280?s loop is confirmed to have a role in the heterotropic coupling between AMP and phosphate. Based on the findings in this study an alternate structural model of activation by AMP involving ?-helix 8 is proposed.
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