The objectives of the study were to investigate the sorption and degradation of a glucuronide conjugated natural hormone, 17β-estradio1-3-glucuronide (E2-3G), and its estrogenic metabolites in soil-water systems. Radiolabeled E2-3G was first synthesized in the laboratory. Soil-water batch experiments were then conducted using natural and sterilized topsoil (0-6 cm) and subsoil (18-24 cm) with the radiolabeled E2-3G to investigate the effects of soil organic matter content and microbial activity. The aqueous dissipation of 14C in the batch experiments followed a biphasic pattern with an initial rapid dissipation phase followed by a second slower phase. Significant differences in total aqueous 14C dissipation were observed for the different initial concentrations for both soils, with greater persistence of intact E2-3G at higher initial concentrations. / National Science Foundation [Grant No. 0730492]

This thesis is a contribution to the work of the Texas Environmental Observatory (TEO), which provides environmental information from the Greenbelt Corridor (GBC) of the Elm Fork of the Trinity River. The motivation of this research is to analyze the short-term water dynamic of soil in response to the substantial rainfall events that occurred in North Texas in 2007. Data collected during that year by a TEO soil and weather station located at the GBC includes precipitation, and soil moisture levels at various depths. In addition to these field measurements there is soil texture data obtained from lab experiments. By comparing existing water dynamic models, water balance equations were selected for the study as they reflect the water movement of the soil without complicated interrelation between parameters. Estimations of water flow between soil layers, infiltration rate, runoff, evapotranspiration, water potential, hydraulic conductivity, and field capacity are all obtained by direct and indirect methods. The response of the soil at field scale to rainfall event is interpreted in form of flow and change of soil moisture at each layer. Additionally, the analysis demonstrates that the accuracy of soil characteristic measurement is the main factor that effect physical description. Suggestions for model improvement are proposed. With the implementation of similar measurements over a watershed area, this study would help the understanding of basin-scale rainfall-runoff modeling.

Modern pig farming production may over burden the environment with organic substances, exposure of bacterial pathogens and introduction of resistance gene. This may be caused by the pig’s droppings, lack of seepage management or accidental spillage of seepage which may impact on the environment and its physicochemical parameters. The objective of this study is to determine and assess the level of bacteriological pollution emanating from the pig farm and their impact on the physicochemical parameters of soil and water as well as to identify the presence of antibiotic resistance gene of these prevailing bacteria. Soil and water samples were collected monthly for a period of six months (March- August 2013). Samples were collected at pig enclosures, soil 20 m and 100 m away from pig enclosures, constructed wetland used for treating pig farm wastewater, soil 20m and 100 m away from constructed wetland. Procedure followed for analysing soil and water samples includes physicochemical analyses, viable cell counts of 10-1 to 10-8 dilutions, identification of bacteria using API 20E test kit, antibiotic susceptibility analyses, and identification of resistance gene using molecular procedures. The media that were used for viable cell counts were, Nutrient agar, MacConkey Agar, Xylose Lysine Deoxycholate agar (XLD agar), and Eosin Methylene Blue (EMB). Physicochemical parameters of water showed unacceptable high levels of analysed parameters for BOD (163 mg/L to 3350 mg/L), TDS (0.77 g/L to 6.48 mg/L), COD (210 mg/L to 9400 mg/L), NO3 (55 mg/L to 1680 mg/L), NO2 (37.5 mg/L to 2730 mg/L), and PO43− (50 mg/L to 1427 mg/L) were higher than the maximum permissible limits set by Department of Water Affairs and Forestry (DWAF). For soil samples TDS (0.01g/L to 0.88 g/L), COD (40 mg/L to 304 mg/L), NO3 (32.5 mg/L to 475 mg/L), and NO2 (7.35 mg/L to 255 mg/L) and PO43- (32.5 mg/L to 475 mg/L ) were observed to be higher than recommended limits set by Federal Ministry for the Environmental (FME). The viable cells in soil samples 30cm depth ranged from 0 cfu/mL to 2.44 x 1010cfu/mL, in soil 5cm depth ranged from 1.00 x 101 cfu/mL to 1.91 x 1010 cfu/mL, and in water samples viable cells ranged from 5.00 x 101 to 5.05 x 109. Pseudomonas luteola (Ps. luteola), Escherichia vulneris (E. vulneris), Salmonella choleraesuis spp arizonae, Escherichia coli 1(E. coli 1), Enterobacter cloacae, Pseudomonas flourescens/putida (Ps. flourescens/putida), Enterobacter aerogenes, Serratia ordoriferal, Pasteurella pneumotropica, Ochrobactrum antropi, Proteus vulgaris group, Proteus vulgaris, Salmonella spp, Aeromonas Hydrophila/caviae/sobria1, Proteus Mirabillis, Vibrio fluvials, Rahnella aquatillis, Pseudomonas aeruginosa (Ps. aeruginosa), Burkholderia Cepacia, Stenotrophomonas maltophilia (St. maltophilia), Shwenella putrefaciens, Klebsiela pneumonia, Cedecea davisa, Serratia liquefaciens, Serratia plymuthica, Enterobacter sakaziki, Citrobacter braakii, Enterobacter amnigenus 2, Yersinia pestis, Serratia ficaria, Enterobacter gergoriae, Enterobacter amnigenus 1, Serratia marcescens, Raoutella terrigena, Hafnia alvei 1, Providencia rettgeri, and Pantoa were isolated from soil and water samples from the pig farm. Isolates were highly resistant to Penicillin G, Sulphamethaxazole, Vancomycin, Tilmocozin, Oxytetracycline, Spectinomycin, Lincomycin, and Trimethoprim. The most resistance genes detected in most isolates were aa (6’)-le-aph (2”)-la, aph (2”)-lb, aph (3”)-llla, Van A, Van B, Otr A and Otr B. Pig farm seepage is causing bacterial pollution which is impacting negatively on the natural environment in the vicinity of pig farm by introducing bacterial pathogens that have an antibiotic resistance gene and is increasing the physicochemical parameters for soil and water in the natural environment at the pig farm. It is therefore recommended that pig farms should consider the need to implement appropriate regulatory agencies that may include the regular monitoring of the qualities of final effluents from waste water treatment facilities. In addition there is a need to limit soil pollution in order to safe guard the natural environment in the vicinity of pig farm from bacteriological pollution and introduction of antibiotic resistance gene. It is also recommended that more advanced technologies should be introduced that will assist pig farms to manages the seepage properly. / Environmental Sciences / M. Sc. (Environmental Sciences)

Submitted in fulfillment of the requirements of the degree of Master of Health Sciences in Environmental Health, Durban University of Technology, Durban, South Africa, 2016. / In South Africa, under-five childhood morbidity and mortality rates have increased due to diarrhoea with acute diarrhoea posing a major public health threat especially, in informal settlements. Therefore this study sought to, a) investigate community knowledge, attitudes, behaviour and practices (KABP) regarding domestic waste and childhood diarrhoeal management, b) to enumerate and identify diarrhoeagenic E.coli species from soil samples extracted from open waste dump sites and c) to investigate any association(s) with diarrhoeagenic E.coli and potential risk of contracting diarrhoea. This two-phased cross-sectional study in six informal settlements in the greater Durban area constituted, respectively, of the administering of questionnaires to 360 primary caregivers and; sampling the prevalence of diarrhoeagenic E.coli (DEC) in waste dumps using quantitative polymerase chain reaction methodologies. Relationships between socio-demographic and educational status to determine potential household risk factors towards under-five diarrhoea prevalence were assessed. The KABP results identified domestic waste and greywater disposal, mother and child method of sanitation, personal and domestic hygiene practices and mechanical vectors as significant contributory risk factors. Of concern is that more than 80% of under-five children played in or near faecally-contaminated waste dump sites. The recovery of four DEC pathotypes including enterohaemorrhagic E.coli, enteropathogenic E.coli, enterotoxigenic E.coli and enteroaggregative E.coli suggest that its persistence in waste-dump soil has the ability to cause under-five diarrhoea in both sporadic and endemic settings. This commonly transmitted hand-to-mouth illness will necessitate and place huge demands on the primary catalysts of change i.e. local governmental role players and caregivers. These change agents have to ensure highly consistent levels of domestic and personal hygiene and implement feasible reduction strategies to waste-dump exposure of diarrhoeal-causing pathogens, particularly among under-five children living in Durban’s informal settlements. / M

Thesis (MScAgric)--University of Stellenbosch, 2004. / ENGLISH ABSTRACT: Storing soil organic carbon (SOC) is a possible way of reducing atmospheric CO2 and potentially mitigating the effects of global warming. This study looks at soil carbon stocks, the sampling methodology and modelling of soil organic carbon in indigenous forests, wetlands, grasslands and pine plantations in Woodbush in the North-Eastern escarpment of Limpopo Province, South Africa. Dominant Pine species planted in Woodbush are Pinus patula, Pinus elliotti and Pinus taeda. Woodbush plantation was selected as study area because it provided easy access to all the ecosystems that were to be studied. All ecosystems in Woodbush are located in such a way that it was easy to compare them, as they existed under similar environmental and climatic conditions. The climatic conditions of Woodbush promote accumulation of SOC due to relatively higher precipitation and cooler temperatures than most parts of Limpopo Province. Five transects were made: two in indigenous forests and three in plantations. Only the surface (0-7 cm) layer was sampled with a distance of 20 m between sampling points. Transects were not made in grasslands and wetlands because of the patchy occurrence of these ecosystems. In addition to transects, eight 1ha plots, two in each ecosystem, were sampled. Surface (0- 7 cm depth) samples were collected on a grid of 20 x 20 m in each sampling plot. Two soil profile pits were sampled in each sampling plot, with samples being taken at 5, 10, 15, 20 30, 40, 50 60, 75 and 100 cm depth. The average carbon stocks per hectare of land to a soil depth of 100 cm were as follows: 71 t.ha-1 in wetlands, 28 t.ha-1 in grasslands, 64 t.ha-1in indigenous forests, and 46 t.ha-1 in pine plantations. Although wetlands sequestered large amounts of SOC per hectare, their relative contribution to carbon sequestration was low because of the relatively small area (87.2 ha) they occupy in the study area (and in South Africa). Prediction models for vertical distribution of SOC were developed using STATISTICA 6.0 for each ecosystem in order to estimate the carbon stocks to a depth of 100 cm based on SOC content and soil bulk density of the surface samples. These models were developed from observed values in soil profiles for each ecosystem. SOC content and carbon stocks were analyzed using GIS (ARCVIEW). The GIS analysis was aimed at assessing the effect of topography, elevation, soil type, and vegetation on accumulation and distribution of SOC stocks. Most shallow Inanda soils were distributed at elevations between 1545 m and 1777 m, and on a gentle slope in the Northern aspect of the mountain. Deep Inanda soils were found mostly in the lower elevation range of 967 m and 1545 m on moderate slopes. Deep and shallow Inanda soils were found on the southern aspect. Deep Kranskop soils are evenly distributed and mostly found at an elevation range of between 1080 and 1430 m on gentle slopes, while at an elevation range of between 1430 and 1780 m, they were found on moderate slopes. Deep soils had higher SOC stocks than shallow soils and soils in the southern aspects had higher SOC stocks than in the northern aspects. / AFRIKAANSE OPSOMMING: Die berging van grond organiese koolstof is ‘n moontlike manier om atmosferiese koolsuurgas (CO2) te verminder en dus om die invloed van globale verwarming te versag. In hierdie studie was die grond-koolstof voorraad bestudeer, asook die metodologie van die monsterneming en modellering van organiese grond-koolstof van inheemse woude, vleie, grasvelde en denneplantasies. Die studie was uitgevoer op Woodbush plantasie gele op die Noord-Oosterlike platorand van die Limpopo Provinsie, Suid-Afrika. Die algemeenste dennespesies in Woodbush is Pinus patula, Pinus elliotti en Pinus taeda. Die Woodbush plantasie was gekies as studiegebied omdat dit oor al die ekosisteme wat bestudeer moet word, beskik. Die ekosisteme in Woodbush is naby mekaar en dus maklik vergelykbaar want die omgewings- en klimaatstoestande is eenders. Die klimaatstoestande van Woodbush bevorder die akkumulasie van grond organiese koolstof omdat die reënval hoër en die temperature laer is as in die meeste ander dele van die Limpopo Provinsie. Vyf dwarssnitte was gemaak, twee in inheemse woude en drie in plantasies. Monsters was net uit die grondoppervlak laag geneem (7 cm) met 20 m tussen monsterpunte. Dwarssnitte was nie in grasvelde en vleie gemaak nie want hierdie sisteme is te gelokaliseerd. Monsters was ook geneem in agt 1 ha persele, twee in elke ekosisteem. Oppervlakmonsters (tot ‘n diepte van 7 cm) is op ‘n ruitnet van 20 x 20 m uit elke perseel versamel. Monsters was verder ook geneem uit twee profielgate per perseel, op dieptes 5, 10, 15, 20, 30, 40, 50, 60, 75 en 100 cm. Die gemiddelde koolstof voorraad per hektaar, op ‘n gronddiepte van 100 cm, was as volg: 71 t.ha –1 in vleie, 28 t.ha-1 in grasvelde, 64 t.ha-1 in inheemse woude en 46 t.ha-1 in denneplantasies. Alhoewel vleie groot hoeveelhede grond organiese koolstof akkumuleer, is hulle bydrae tot koolstof akkumulasie laag want hulle beslaan ‘n klein oppervlak binne die studiegebied (87.2 ha) asook klein oppervlaktes binne Suid-Afrika. Voorspellingsmodelle vir die vertikale verspreiding van grondkoolstof was met die gebruik van STATISTICA 6.0 ontwikkel ten einde te skat wat die koolstofvoorrraad op ‘n diepte van 100 cm was. Die skattings was gebaseer op organiese grondkoolstofinhoud en die gronddigtheid van oppervlakmonsters. Hierdie modelle was ontwikkel vanaf die waargenome waardes van grondprofiele vir elke ekosisteem. Die organiese koolstofinhoud van die grond en die koolstofvoorraad is ontleed met behulp van GIS (ARCVIEW). Die GIS ontleding was daarop gemik om die effek van topografie, hoogte bo seespiëel, grondtipe en plantegroei, op die akkumulasie en verspreiding van organiese grondkoolstof, te beraam. Die meeste vlak Inanda grondvorms kom voor tussen 1545 m en 1777 m bo seespiëel, asook op effens steil hellings op die Noordelike berghang. Die diep Inanda grondvorms is geleë op laer hoogtes bo seespiëel, gewoonlik tussen 967 en 1545 m, op effens steil hellings. Beide diep en vlak Inanda gronde word gevind op die suidelike berghang. Diep Kranskop gronde is eweredig versprei en word gewoonlik tussen 1080 en 1430 m bo seespiëel, op effens steil hellings, gevind. Dit kom ook voor op matig steil hellings, tussen 1430 en 1780 m bo seespiëel. Daar is meer organiese koolstof in diep grond as in vlak grond en meer in gronde teen die suidelike hang as op die noordelike hang.

Modern pig farming production may over burden the environment with organic substances, exposure of bacterial pathogens and introduction of resistance gene. This may be caused by the pig’s droppings, lack of seepage management or accidental spillage of seepage which may impact on the environment and its physicochemical parameters. The objective of this study is to determine and assess the level of bacteriological pollution emanating from the pig farm and their impact on the physicochemical parameters of soil and water as well as to identify the presence of antibiotic resistance gene of these prevailing bacteria. Soil and water samples were collected monthly for a period of six months (March- August 2013). Samples were collected at pig enclosures, soil 20 m and 100 m away from pig enclosures, constructed wetland used for treating pig farm wastewater, soil 20m and 100 m away from constructed wetland. Procedure followed for analysing soil and water samples includes physicochemical analyses, viable cell counts of 10-1 to 10-8 dilutions, identification of bacteria using API 20E test kit, antibiotic susceptibility analyses, and identification of resistance gene using molecular procedures. The media that were used for viable cell counts were, Nutrient agar, MacConkey Agar, Xylose Lysine Deoxycholate agar (XLD agar), and Eosin Methylene Blue (EMB). Physicochemical parameters of water showed unacceptable high levels of analysed parameters for BOD (163 mg/L to 3350 mg/L), TDS (0.77 g/L to 6.48 mg/L), COD (210 mg/L to 9400 mg/L), NO3 (55 mg/L to 1680 mg/L), NO2 (37.5 mg/L to 2730 mg/L), and PO43− (50 mg/L to 1427 mg/L) were higher than the maximum permissible limits set by Department of Water Affairs and Forestry (DWAF). For soil samples TDS (0.01g/L to 0.88 g/L), COD (40 mg/L to 304 mg/L), NO3 (32.5 mg/L to 475 mg/L), and NO2 (7.35 mg/L to 255 mg/L) and PO43- (32.5 mg/L to 475 mg/L ) were observed to be higher than recommended limits set by Federal Ministry for the Environmental (FME). The viable cells in soil samples 30cm depth ranged from 0 cfu/mL to 2.44 x 1010cfu/mL, in soil 5cm depth ranged from 1.00 x 101 cfu/mL to 1.91 x 1010 cfu/mL, and in water samples viable cells ranged from 5.00 x 101 to 5.05 x 109. Pseudomonas luteola (Ps. luteola), Escherichia vulneris (E. vulneris), Salmonella choleraesuis spp arizonae, Escherichia coli 1(E. coli 1), Enterobacter cloacae, Pseudomonas flourescens/putida (Ps. flourescens/putida), Enterobacter aerogenes, Serratia ordoriferal, Pasteurella pneumotropica, Ochrobactrum antropi, Proteus vulgaris group, Proteus vulgaris, Salmonella spp, Aeromonas Hydrophila/caviae/sobria1, Proteus Mirabillis, Vibrio fluvials, Rahnella aquatillis, Pseudomonas aeruginosa (Ps. aeruginosa), Burkholderia Cepacia, Stenotrophomonas maltophilia (St. maltophilia), Shwenella putrefaciens, Klebsiela pneumonia, Cedecea davisa, Serratia liquefaciens, Serratia plymuthica, Enterobacter sakaziki, Citrobacter braakii, Enterobacter amnigenus 2, Yersinia pestis, Serratia ficaria, Enterobacter gergoriae, Enterobacter amnigenus 1, Serratia marcescens, Raoutella terrigena, Hafnia alvei 1, Providencia rettgeri, and Pantoa were isolated from soil and water samples from the pig farm. Isolates were highly resistant to Penicillin G, Sulphamethaxazole, Vancomycin, Tilmocozin, Oxytetracycline, Spectinomycin, Lincomycin, and Trimethoprim. The most resistance genes detected in most isolates were aa (6’)-le-aph (2”)-la, aph (2”)-lb, aph (3”)-llla, Van A, Van B, Otr A and Otr B. Pig farm seepage is causing bacterial pollution which is impacting negatively on the natural environment in the vicinity of pig farm by introducing bacterial pathogens that have an antibiotic resistance gene and is increasing the physicochemical parameters for soil and water in the natural environment at the pig farm. It is therefore recommended that pig farms should consider the need to implement appropriate regulatory agencies that may include the regular monitoring of the qualities of final effluents from waste water treatment facilities. In addition there is a need to limit soil pollution in order to safe guard the natural environment in the vicinity of pig farm from bacteriological pollution and introduction of antibiotic resistance gene. It is also recommended that more advanced technologies should be introduced that will assist pig farms to manages the seepage properly. / Environmental Sciences / M. Sc. (Environmental Sciences)

Thesis (MScAgric)--Stellenbosch University, 2013. / ENGLISH ABSTRACT: Soil is a fundamental, non-renewable resource in any ecosystem. To uphold food production for increasing global human populations, it is imperative to develop ways in which to sustain healthy biological productivity and sustainability of agricultural soils. Nematodes are one of the most abundant groups of Metazoa occurring in all soils, and form an integral part of the soil food web at several trophic levels. They respond rapidly to changes within their environments, and can easily be extracted from soil, identified and characterised into functional guilds. Nematodes thus have the potential to impart insight into the condition of the soil food web. This study aims to establish whether nematodes will be suitable bio-indicators of soil health for the deciduous fruit industry in the Western Cape. Three different objectives have been set to determine the practical use of nematode community structures as a tool for the measurement of soil health. The objectives include describing the nematode community structure, biodiversity and functionality within Fynbos soils; the characterization of organic and conventional orchards; and the differences in nematode soil communities in differently managed soils in an apple orchard. The number of nematodes in each soil sample was quantified and identified to family level. The nematode biodiversity and functionality for each site was determined by evaluating the nematode food webs for trophic group distribution, as enumerated by the Maturity Index (MI), the Enrichment Index (EI), the Structure Index (SI), the Basal Index (BI) and the Channel Index (CI), based on the weighted abundance of coloniser-persister guilds. The functional guild analysis of Fynbos samples indicated that the enrichment and the structure of any given sample were not bound to a certain area, but it was representative of each of the four quadrats within the faunal analysis. Different geographic areas were found to differ in nematode diversity and functionality, which was mainly associated with dominant plant families and species (such as strong associations between Fynbos families Fabaceae, Solanaceae and Celestraceae with the nematode family Pratylenchidae). The most abundant nematode families present in the Fynbos were Tylenchidae, which are plant-feeding nematodes, and Cephalobidae which are bacterial-feeding nematodes. Despite Tylenchidae and Cephalobidae both having coloniser-persister values (cp-values) of two, they are split up into different feeding types. Cp-2 nematodes are tolerant to disturbances, and occur in all environments. Only one omnivorous family, the Dorylaimida, was identified in Fynbos samples. The average MI value for Fynbos was found to be very low, with a mean value of 1.26. The value obtained indicated the presence of taxa with tolerance to disturbance, which, in turn, indicated the presence of a disturbed soil, in general. The number of plant-parasitic nematodes within the Fynbos soils was low, which was supported by the low plant-parasitic index (PPI) of 0.85. The diversity, richness and evenness values were low, indicating low nematode diversity, but a distribution of abundances amongst the families. The average Hill’s N0 index value was 8.0, indicating that, in general, eight nematode families would have been present in a Fynbos soil sample. A study was done to determine the biodiversity and the functionality of the nematodes associated with deciduous fruit orchards that were conventionally, or organically, managed. Herbivores were dominant in all the orchards. The organic apple orchard had the lowest numbers of herbivores and fungivores, with the highest number of carnivores. When comparing organic and conventional apricot orchards, higher numbers of plant-parasitic nematodes were found in the organic orchard. Criconematidae occurred in higher numbers in conventional apricot orchard soil. When comparing organic apricots and apples, higher numbers of Criconematidae occurred within the organic apple soil. Overall, higher levels of plant-parasitic nematodes occurred in the organic apricot orchard. The MI indicated that all orchard soils had values below 1.5, indicating disturbance. Conventionally managed apricot orchard soil had the highest MI value of 1.48. The PPI value was highest in organically managed apricot orchards. All orchard soils were located within Quadrat B of the faunal analysis, indicating enrichment and structure. Regarding the diversity, richness and evenness of the distribution, conventional apricot soil had the highest species richness, while organic apple soil had the most even family distribution. Different management practices did not show marked differences in community composition and structure. The species richness of Fynbos soils was comparable to those of deciduous fruit orchards. Soil samples from eight different soil surface treatments were collected from an apple orchard in the Grabouw area. Treatments were combined according to the soil surface treatments received (chemical control of cover crops and weeds, mulch and mulch + effective micro-organism spray). Bacterivores were dominant in all soil treatments, with the least number being present in the chemical control (of cover crops and weeds) treatment. Sites which received chemical control of cover crops and weeds had higher levels of fungivores, compared to the levels at the other sites. High numbers of Rhabditidae occurred within mulch and mulch + effective micro-organism (EM) treatment sites, while high numbers of Aphelenchidae occurred in chemical control sites. The carnivorous family Ironidae only occurred in mulch + EM sites. Strong associations were found between soil surface applications and nematode families present within the soil. Chemical control (of cover crops and weeds) applications had the highest MI value, while values were equal for the other soil applications. The faunal analysis indicated that the mulch and the chemical control fell within Quadrat A, indicating enriched, but unstructured, soil, while the mulch + EM treatment fell within Quadrat B, indicating enrichment and structure, as well as good overall soil conditions. All the systems were dominated by bacterial decomposition pathways. Controversially, sites that received chemical control of the cover crops and weeds had the highest species richness of all three applications, as well as the highest level of diversity, according to the Simpson Index. As only the cover crops and the weeds were chemically controlled, the soil can be regarded as undisturbed, which explains the results obtained in this study. Clear differences in nematode community structure and composition were observed between the different soil applications in the apple orchard. / AFRIKAANSE OPSOMMING: Grond is 'n fundamentele, nie-hernubare hulpbron binne enige ekosisteem. Ten einde voedselproduksie vir die toenemende globale menslike bevolking te handhaaf, is dit noodsaaklik om maniere te ontwikkel om gesonde biologiese produktiwiteit en volhoubaarheid van landbougrond in stand te hou. Nematodes is een van die volopste Metazoa in alle gronde en vorm 'n integrale deel van die grond voedsel-web op verskeie trofiese vlakke. Hulle reageer vinnig op veranderinge binne hul omgewings, kan maklik ekstraheer en identifiseer word; en ook maklik in funksionele gildes ingedeel word. Nematodes het ook die potensiaal om insig oor te dra ten opsigte van die toestand van die grond voedsel-web. Hierdie studie het ten doel om vas te stel of nematodes geskikte bio-indikatore van grond gesondheid kan wees spesifiek vir die sagtevrugte bedryf in die Wes-Kaap. Drie verskillende doelwitte is gestel om die praktiese gebruik van nematode populasie samestelling as 'n instrument vir die meting van grond gesondheid te gebruik. Die doelwitte sluit in die nematode populasie samestelling, biodiversiteit en funksionaliteit binne natuurlike Fynbos; organies verboude versus konvensionele boorde; en die verskil in nematode populasie samestelling tussen verskillend behandelde en bestuurde grondpersele binne ʼn appel boord. Die nematode biodiversiteit en funksionaliteit vir elke perseel was bepaal deur die evaluering van die nematode voedselweb vir trofiese groep verspreiding en enumerering deur die Maturity Index (MI) en die Enrichment Index (EI), Strukturele Indeks (SI), Basale Indeks (BI) en Channel Index (CI) wat gebaseer is op die geweegde oorvloed van koloniseerder-persister gildes. Die funksionele gilde vir Fynbos monsters het aangedui dat die verryking en struktuur van enige gegewe perseel nie gebonde is aan ʼn bepaalde gebied nie, aangesien dit verteenwoordig was in elk van die vier kwadrante van die Fauna Analiseerder. Daar is gevind dat verskillende areas verskil in nematode diversiteit en funksionaliteit, wat hoofsaaklik geassosieer was met die dominante plant families en spesies in die omgewing. Die volopste nematode familie wat teenwoordig was in die Fynbos was Tylenchidae, wat plant-voedende nematodes is, en Cephalobidae, wat bakterie-voedend is. Tylenchidae en Cephalobidae het beide ʼn cp-waarde van twee, maar is verdeel in verskillende VIII tipes voedingsgroepe. Die cp-2 nematodes is verdraagsaam vir versteurings en kom in alle omgewings voor. Slegs een omnivoor familie is geïdentifiseer in Fynbos monsters, nl. die Dorylaimidae. Die gemiddelde MI waarde vir Fynbos was laag, met 'n gemiddelde waarde van 1.26. Hierdie waarde is ʼn aanduiding van die teenwoordigheid van taxa met verdraagsaamheid tot versteuring, wat op sy beurt 'n versteurde grond in die algemeen aangedui het. Die aantal plant-parasitiese nematodes binne die Fynbos-gronde was laag, wat ondersteun word deur die lae PPI-waarde van 0.85. Die waardes vir die diversiteit, spesie-rykheid en egaligheid was laag, wat dui op 'n lae nematode diversiteit, maar 'n egalige verspreidings onder families. Die Hill’s N0 indeks waarde was gelyk aan 'n gemiddelde van 8.0 en dui daarop dat in die algemeen agt nematode families teenwoordig sal wees in 'n Fynbos grondmonster. 'n Studie is gedoen om die biodiversiteit en funksionaliteit van nematodes wat verband hou met vrugteboorde wat organies en konvensioneel bestuur is te bepaal. Herbivore was dominant in alle boorde. Organiese appels het die laagste aantal herbivore en fungivore gehad en die hoogste aantal karnivore. Wanneer organiese en konvensionele appelkoosboorde met mekaar vergelyk is, was hoër getalle van plant-parasitiese nematodes gevind in die organiese boord. Criconematidae was teen ʼn groter aantal in die grond van die konvensionele appelkoosboord gevind. Met die vergelyking van organiese appelkose en appels word, is ʼn hoër aantal Criconematidae binne die organiese appelgrond aangetref. In die algemeen was hoër vlakke van plant-parasitiese nematodes gevind in die organiese appelkoosboord. Die MI het getoon dat alle boord waardes laer as 1.5 gehad het, wat daarop dui dat die gronde versteurd is. Die konvensioneel bestuurde appelkoosboord het die hoogste MI waarde gehad met ʼn vlak van 1.48. Die waarde vir die PPI was die hoogste in organies bestuurde appelkoosboorde. Alle boord gronde is geleë binne kwadrant B van die Fauna Analiseerder, wat dui op verryking met struktuur. Met betrekking tot die diversiteit, spesie-rykheid en egaligheid van die verspreiding van families, het konvensionele appelkoos grond die hoogste spesierykheid, terwyl die gronde van die organiese appelboord die mees egalige familie verspreiding vertoon het. Verskillende bestuurspraktyke nie toon nie merkbare verskille in die gemeenskap samestelling en struktuur nie. Die spesie-rykheid van Fynbos gronde is vergelykbaar met dié van sagtevrugte-boorde. Monsters is geneem van agt verskillende grondeoppervlak-behandelings in ‘n appelboord in die Grabouw area. Die behandelings is gekombineer volgens die grond toediening wat dit ontvang het (chemiese beheer van dekgewasse en onkruid, deklaag en ‘n deklaag + effektiewe mikro- IX organismes). Bakterievoedende nematodes was dominant in elke grondoppervlak-behandeling, met die minste teenwoordig in die behandelings wat chemiese beheer van die dekgewasse en onkruid ontvang het. Behandelings wat chemiese beheer van die dekgewasse en onkruid ontvang het, het ook hoër vlakke van fungivore in vergelyking met die ander behandelings. ʼn Hoë aantal Rhabditidae het voorgekom in grondmonsters van die deklaag en die deklaag + EM (effektiewe mikro-organismes) behandeling persele, terwyl ʼn groot aantal Aphelenchidae voorgekom het in chemiese beheer persele. Die predatoriese familie, Ironidae, het slegs voorgekom in persele wat die deklaag + EM behandeling ontvang het. Sterk assosiasies bestaan tussen grond behandeling en nematode families wat in die grond teenwoordig was. Die chemiese beheer behandeling het die hoogste MI waarde getoon, terwyl waardes vir die ander behandelings laer en gelyk was. Die fauna analise het daarop gedui dat die deklaag en chemiese beheer binne kwadrant A is en dus verryk, maar ook ongestruktureerd is. Die deklaag + EM behandeling het binne kwadrant B geval wat aandui op toestande van verryking en struktuur wat 'n goeie algehele grondtoestand tot gevolg gehad het. Al die stelsels is oorbruggingsweë wat oorheers was deur bakteriële ontbinding. Kontroversieel, het persele wat chemiese beheer van die dekgewasse en onkruid ontvang het, die hoogste spesierykheid van al drie behandelings getoon asook die hoogste vlak van diversiteit volgens die Simpson-indeks. Slegs die dekgewasse en onkruid is chemies behandel, nie die grond nie, en dus kan die grond as onversteurd beskou word en die resultate wat verkry is in die studie verklaar. Duidelike verskille in die nematode gemeenskap struktuur en samestelling is waargeneem tussen die verskillende grond behandelings in appel boorde.

Landfills have served as the major sites for waste disposal in both developed and developing countries. Upon closure of a landfill site, the surface could be converted to a golf course, recreation park, playground, animal refuge, tennis court and industrial site. Even when closed, landfills still have the potential to contaminate the surrounding environment as a result of the migration of leachate from decomposing waste contained in the site. This study focused on assessing the impacts of a closed landfill on soils and plants at Lumberstewart closed landfill site in Bulawayo, Zimbabwe. Soil samples were collected at three different depths (0-30 cm, 30 - 60 cm and 60-90 cm) at the landfill and a control site. The soil samples were analysed for their texture, pH, electrical conductivity, organic matter content, cation exchange capacity and concentrations of Cd, Cu, Cr, Fe, Ni and Zn. Samples of jimson weed and pigweed growing at the closed landfill and the control site were collected from the same sites where soil samples were collected, and the concentrations of the same set of heavy metals in these weeds determined. Soil samples were digested using EPA method 3050B: Acid Digestion of Sediments, Sludge and soils whereas nitric acid and hydrogen peroxide was used for digestion of plant samples. Both plant and soil digests were analyzed for heavy metals concentrations using Flame Atomic Absorption Spectrometry (AAS). Soils from the landfill as well as the control site had a high content of sand with soil pH values which were alkaline. The electrical conductivity values of the soil samples were relatively low ranging from 0.39 to 1.67 dS/m, indicating low levels of salts in soils at the landfill. The concentrations of heavy metals at the closed landfill site were higher than the control site. Heavy metals concentrations in soils at the closed landfill followed the order Fe>Zn>Cu>Cr>Ni>Cd. Results indicated that Fe was exceptionally higher than the other metals with concentration values averaging 45690±17255 mg/kg. Cadmium on the other hand had the least concentration with values of 0.01±0.00 mg/kg. Values of Enrichment Factors of heavy metals around the soil at different depths indicated that the enrichment of heavy metals increased with depth at the landfill up to 30-60 cm after which a decrease was observed. Values for heavy metal Contamination Factor of soils around the landfill ranged from low concentration (CF<1) to very high concentration (CF>6). The Pollution Load Index (PLI) values for the soil at the Lumberstewart landfill indicated that all sites were polluted (PLI>1). Site 6 had significantly higher mean concentration of heavy metals in soils at the landfill whereas site 11 had the least. The concentrations of Cd and Ni in soils at the landfill were below permissible limits of South African National Norms and Standards (NNS) as prescribed by NEMA (2008) in South Africa whereas Cr, Cu and Zn in soils were above the NNS permissible limits. Heavy metal concentrations in soils at the landfill were above World Health (WHO) permissible limits except for Cd which was equal (0.01 mg/kg) to the permissible values of Cd in the soils at sites 5, 8, 9, 10, 11 and 12. Mean concentrations of heavy metals in jimson weed and pigweed were in the order Fe>Zn>Cu>Cr>Ni>Cd. The concentrations of Cd, Cr, Cu, Fe and Zn in both plants from all sites at the landfill were significantly higher than the control site. Heavy metal transfer coefficient for both plants indicated that heavy metal uptake was more species dependent than soil heavy metal concentration dependent. The results from this research indicate that though the Lumberstewart Landfill has been closed, it is still affecting the soils in the vicinity of the landfill. Plants and water around the Lumberstewart closed landfill could be at risk from heavy metal contamination. High concentrations of heavy metals observed in the soil could present a health risk to communities should they decide to use the landfill site for arable purposes. / Environmental Sciences / M. Sc. (Environmental Science)