Sorghum [Sorghum bicolor (L.) Moench] is one of the most important cereal crops grown in arid and semi-arid regions of the world. The North Eastern regions of Ethiopia are known for its high sorghum production and genetic diversity, and proneness to moisture stress. Globally, moisture stress is one of the major sorghum production constraints limiting genetic gain through breeding. Although, the importance of Ethiopia’s sorghum germpalsm has been widely recognized both nationally and internationally, the genetic potential of the germplasm has not yet been fully assessed and exploited in breeding programmes. Therefore, the objectives of this study were: (1) to evaluate sorghum production systems and patterns, major production constraints and cropping mechanisms, varietal diversification, farmers’ criteria for choosing varieties over time and space, and adoption of improved varieties, (2) to assess the agro-morphological and molecular diversity and population structure of lowland sorghum landraces collected from different geographic origins using morphological and SSR markers, (3) to assess the performance of sorghum landraces under moisture stress conditions and identify promising lines, and (4) to determine heterosis and combining ability of lowland sorghum landraces for grain yield, yield components and drought tolerance and to identify suitable parents for future hybrid cultivar development for the North Eastern Ethiopia or similar environments. A survey was conducted in the North Eastern Ethiopia sampling three Administrative Zones, six Districts and 12 Peasant Associations. Data was gathered from a total of 171 farmers and analyzed using SPSS statistical package. The results suggest that the performance of sorghum was generally poor mainly due to moisture stress, pests, diseases, weeds, farmland fragmentation due to demographic pressure, poor soil fertility, and poor performance of the local varieties. The productivity of sorghum was also largely hindered by the use of inherently poor yielding local landraces as farmers were forced to abandon their high yielding, big-headed and late maturing sorghum varieties due to the prevalence of recurrent moisture stress. The survey found that the region is as a rich source of genetic diversity and more than 70 distinct sorghum landraces were identified. The majority of the farmers grew their local landraces, despite the accessibility and availability of many improved sorghum varieties and production packages. Farmers were willing to adopt the improved varieties if they had farmers preferred attributes such as as red seed colour, tall with high biomass yield. To benefit the most from the available improved technologies, farmers have to be part of the breeding process right from the very beginning. Lowland sorghum accessions which exhibited farmer-desired traits were selected from the entire landrace germplasm collection at the national gene bank of Ethiopia. Field evaluations of the selected 278 landraces together with checks were held at Sirinka and Kobo agricultural research stations for 12 qualitative and 10 quantitative traits under stress and non-stress conditions. Two hundrad landraces were selected on the basis of their morphological distinctiveness and drought tolerance, in terms of earliness and yield stability. Molecular level diversity assessment was conducted using 30 SSR markers. Considerable magnitude of variation was observed among landraces between and within geographic origin for most of the traits studied. The morphological variability was also complemented by high molecular markers diversity. Thirty two pure lines were selected for inclusion as parents in the sorghum breeding programme for yield and drought tolerance. The selected lines were then crossed to four cytoplasmic male-sterile lines that had different cytoplasm systems (A1 to A4) using a line x tester mating design scheme. The 32 parents, together with the 128 hybrids and 4 check varieties were evaluated for grain yield, yield components traits and drought tolerance under stress and non-stress environments. Data were analysed using GenStat statistical package following a fixed effects model. Non-additive gene action was predominant in controlling plant height, grain yield, above ground biomass, grain filling duration, 100-seed weight and panicle weight, whereas additive gene action was found more important in controlling days to 50% anthesis and panicle length. Novel landraces with high GCA effects were selected including 214838-A, 242039-B, 75454, 73056-B, and 242050-A which will serve as potential parents for cultivar development. Similarly, the study identified new experimental hybrids i.e. ICSA 749 x 242039-B, ICSA 756 x 242049-B, ICSA 756 x 75454, ICSA 756 x 73059 and ICSA 756 x 214855 with high SCA effects and heterosis for grain yield which will be forwarded for further stability analysis and farmers participatory selections at representative growing environments. In general, the study identified invaluable sorghum germplasm and candidate hybrids useful for further breeding and conservation strategies. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2012.

Sorghum [Sorghum bicolor (L.) Moench] is a major food security crop for millions of people in sub-Saharan Africa and the fourth most important crop in Africa. The potential sorghum yields are limited due to a number of abiotic, biotic and socio-economic constraints. Among the biotic stresses is the parasitic weed, Striga hermonthica, which inflicts yield losses ranging from 30-100%. Various control options have been recommended to reduce levels of Striga damage. However, these techniques need to be integrated for effective control and to boost sorghum productivity. A series of experiments was conducted to integrate host resistance improvement and the use of a biological control agent, Fusarium oxysporum f.sp. strigae to control Striga hermonthica. These studies were also focused on improving breeders‟ awareness of the traits that farmers‟ desire, on the assumption that farmers‟ variety preference traits are the missing link in technology development and adoption process for S. hermonthica management. The objectives of the study were to: 1) determine farmers‟ views on sorghum production opportunities; threats; indigenous knowledge and perceptions; breeding priorities; Striga infestation; and the coping mechanisms of farmers in the north eastern and north western Ethiopia, 2) evaluate sorghum genotypes for compatibility to F. oxysporum inoculation where grown in Striga infested soil in controlled environments, 3) determine field responses of sorghum genotypes and F. oxysporum compatibility for integrated Striga management (ISM), 4) determine the variability present among selected sorghum genotypes exhibiting S. hermonthica resistance, and compatibility with the biological control agent using phenotypic and simple sequence repeat (SSR) markers, 5) identify F. oxysporum compatible sorghum parents and hybrids with high combining ability for grain yield, yield components, and Striga resistance for ISM, and 6) undertake farmers‟ participatory assessment, and identify their preferred traits for sorghum genotypes under ISM, simultaneously with the breeders‟ evaluation. A participatory rural appraisal (PRA) research was conducted involving 315 farmers in nine districts of three administrative zones within two provinces in Ethiopia. Sorghum landraces were preferred by >85% of participants rather than previously improved released varieties. The participating farmers listed and prioritized their sorghum production constraints. In the North Shewa and North Wello zones drought was the most important constraint, followed by Striga. In the Metekel zone Striga was the number one constraint followed by a lack of genotypes with high grain quality. Controlled environment experiments were conducted involving greenhouse and laboratory tests in order to evaluate 50 sorghum genotypes for their compatibility with F. oxysporum and for possible deployment of the bio-control agent to control Striga. Striga population was reduced by 92% through the application of F. oxysporum, resulting in yield increment of 144%. Twelve sorghum genotypes were identified as promising parents for breeding and to control Striga through integration of host resistance and F. oxysporum seed treatment. During field and sick plot plot evaluations differential responses to F. oxysporum application among the sorghum genotypes were observed for various attributes including Striga plant height. Most traits showed highly significant (p<0.001) genotype X site interactions. Similarly, the main effects of F.oxysporum application were highly significant (p<0.001) across sites for most of the traits. The genotype and genotype X environment biplot identified 13 genotypes that consistently performed well following Fusarium application. The variability present among 14 selected sorghum genotypes exhibiting S. hermonthica resistance, and compatibility with a biological control agent, Fusarium oxysporum, were determined using phenotypic and 20 polymorphic simple sequence repeat (SSR) markers. Highly significant (p<0.001) differences were detected among genotypes for phenotypic traits. Principal component analysis showed three components that accounted for 73.99% of the total variability exhibited among genotypes. Cluster analysis allocated the genotypes into two major groups, one with a further two subgroups based on morphological traits, showing clear demarcations between the genotypes. The SSR markers revealed high levels of polymorphisms among genotypes, with the mean number of alleles per locus being 6.95 and the mean polymorphic information content being 0.80. The observed genetic diversity was relatively wide, with the allele sizes ranging from 203.6-334 bp. The SSR markers allocated genotypes into two distinct clusters close to the phenotypic markers. Forty sorghum hybrids were developed through a line by tester mating design involving 10 lines selected for their compatibility with F. oxysporum and high agronomic performances and four Striga resistant tester parents. The F1s and their parents were field evaluated with complementary in-vitro tests. Field evaluations were conducted at two locations: Kobo and Shewa Robit in Ethiopia, which are well known for their severe Striga infestation. Significant (p<0.05) general combining ability (GCA) effects were observed among testers and lines at both sites for days to 50% flowering and maturity, plant height, biomass, number of Striga plants and Striga plant height. Furthermore, significant (p<0.05) specific combining ability (SCA) effects were detected for days to 50% flowering, biomass, grain yield and number of Striga plants. From the complementary in-vitro experiment, highly significant variation (p<0.01) was exhibited due to line x tester interaction for maximum Striga germination distance. The study identified paternal parents with high GCA effects including SRN-39 and Birhan and maternals 235761, 2384443, IC9830, 235466, 237289,235763, and 235929 to be useful for breeding for ISM in sorghum. At Kobo, cross 235763 x N-13 and Shewa Robit IC9830 x SRN-39 had significantly negative SCA effects for the numbers of Striga plants. Progenies of these crosses will be selected in the Striga resistance breeding program. In the participatory sorghum genotypes assessment, farmers were invited to assess and select the genotypes based on their preferences at maturity and harvesting. The standard agronomic traits and Striga parameters relevant for breeding were collected by the breeders. Earliness, Striga resistance, high yield and high grain quality and threshability were the most important farmers‟-preferred traits for sorghum genotypes. Comparative analyses between farmers‟ and breeders‟ evaluations revealed highly significant correlations (p<0.01) except between Striga resistance and Striga damage and pest resistance and insect damage. Repeatability of scoring genotypes among farmers was consistent (>0.80) for all traits except Striga and pest resistance. The prioritized traits through farmers‟ participation are important for further breeding program. Overall, the study established farmers‟ preferred traits, the effectiveness of ISM to boost sorghum productivity, and identified useful parents and crosses for effective sorghum breeding to control Striga in Ethiopia. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2013.