The history of Grahamstown is well documented and two books deal with the history of Rhodes University. Although the Chemistry Department was one of the founding departments, coverage in the official histories is minimal and sometimes inaccurate or misleading. The Rhodes University Centenary is an appropriate time to look back on some of the achievements of the department and some of its graduates over the past 100 years.

A suite of mafic dykes occurs as a late component in a wellcharacterized trondhjemite–tonalite–diorite–granodiorite assemblage in the Johannesburg Dome of the central Kaapvaal Craton, southern Africa. The dykes have been subdivided into two sets, based on their orientation, and major and trace element geochemistry. Set 1 dykes are characterized by elevated SiO2, Al2O3 and TiO2, and particularly by enriched LILE and HSFE (e.g. Zr > 200 ppm, Nb > 20 ppm, Ba > 300 ppm), higher than in any of the accompanying felsic rocks. REE and trace element values for Set 1 dykes are similar to those for calc-alkaline lamprophyres. The Set 2 dykes have similar trace element distributions, but are significantly less enriched in general, and are broadly tholeiitic in composition, with enriched MgO (>11 wt.%) indicative of an olivine–phyric tholeiitic basaltic protolith. Field relationships and available U–Pb zircon geochronology indicate that the dykes are contemporaneous with components of the trondhjemitic host rocks, and with late granodiorites. The geochemical, geochronological and field petrological setting indicates partial melting of basaltic and eclogitic lithosphere at c. 3120 Myr ago in the basal Kaapvaal Craton, and subsequent emplacement into pre-existing c. 3430 Myr tonalitic to dioritic crust.

New rare earth element (REE) data from all lithologies of the Insizwa lobe, Mount Ayliff Complex, are presented. On the basis of size and type of Eu anomaly, the geochemical subdivision of the complex as previously described is sustained and, additionally, the Top Gabbronorite of the Central Zone is shown to have formed from a magma that was compositionally distinct from other Central Zone magmas. The Basal Zone crystallized from magmas with large negative Eu anomalies probably acquired through crustal contamination. Previously recognized compositional heterogeneity in the contact rocks is also a feature of the REE. Overall, the Insizwa magmas had higher La/Sm ratios and, to a lesser extent, higher Gd/Yb ratios than Karoo basalts and appear to have no representatives in the basalt lava sequence of Lesotho.

The Grahamstown clay deposits occur below the Grahamstown Formation silcrete, which forms a remnant of an extensive peneplain that developed on the African erosion surface during the Cretaceous–Tertiary period. This paper provides new data on the distribution of the kaolinitic clay deposits in the Beaconsfield area north of Grahamstown. These data include 23 borehole profiles through the deposits, and the chemistry and mineralogy of the clays. Relatively little information is available on this part of the peneplain. It was found that the thickness of the kaolin horizon varies considerably, but reaches 35m in places. It generally occurs under a silcrete cover, which attains a thickness of 8 m in places. Lithological logs enable direct comparison across the Beaconsfield area. The clays are developed in both the Witteberg Group shale and Dwyka Group tillite. The contact between the clay and underlying bedrock is gradational and relatively uneven. Major-element X-ray fluorescence analyses revealed that there is chemical variation, both vertically and laterally. Al2O3 content is generally near 20%, but may reach 29%. SiO2 content varies between 55 and 70+%. SiO2 contents are highest in the silcretes occurring just below soil level. Fe2O3 is high locally in the top part of the profile. K2O and Na2O are generally low, but increase towards the unweathered bedrock as the primary feldspar content increases. These compositional variations are compatible with residual concentrations of kaolinitic clays through deep weathering below the former African erosion surface.

This paper reviews the main findings of the Southern Ocean Group at Rhodes University over the last 17 years. A primary contribution has been the development of conceptual models of the physical-biological driving mechanisms that support enormous seasonal populations of land-based top predators at the Prince Edward Islands. Collectively, these models are referred to as the life-support system of the islands. Near-shore subcomponents of the ecosystem, including inshore feeding predators, are largely supported by autochthonous primary production of kelps and localized diatom blooms. These energy sources feed indirectly into top predator populations via the benthic communities. A crucial link is formed by the bottom-dwelling shrimp, Nauticaris marionis, which feeds largely on benthic species and detritus and is eaten by a number of diving seabirds. The frontal systems that lie north and south of the islands are important feeding grounds for offshore feeding birds. A decadal-scale southward shift in the position of the Sub-antarctic Front towards the islands is reflected in increases in populations of these species.

An initial survey of iris coloration in passerine birds (Aves: Passeriformes) showed that a brightly pigmented iris is much more common in southern African and Australian birds than in those from Europe, temperate North America, and Venezuela. However, the only statistical correlation reflected the distribution of particular bird families in these regions. Ten family-level groups considered to represent monophyletic taxa were then selected for a more detailed analysis, comparing iris coloration with distribution, status, taxonomy, plumage patterns, and some biological and behavioural characters for 1143 species. No pattern associating iris colour with particular traits was common to all families, but within families there were statistically significant associations with both plumage and biology. Our expectation that social behaviour would be an important predictor of iris colour was not supported, but critical information is still lacking for many species. Future studies of avian behavioural ecology should examine critically the role of iris coloration in individual species.

Truly understanding biological diversity requires a move from descriptive studies to mechanistic interpretations based on comparative biology and a thorough recognition of the natural history of the focal organisms. A useful step in such comparative studies is the generation of a phylogeny, so that one can assess the phylogenetic independence of the focal taxa and trace the evolutionary significance of their characteristics. As a preliminary to such studies on the platypleurine cicada genus Platypleura, we sequenced 498 bases of the cytochrome oxidase I (COI) gene from thirteen African species. To circumvent problems with outgroup selection, we also included sequences from representatives of the platypleurine genera Brevisiana, Capcicada, Munza, Oxypleura, Severiana, and Systophlochius, all of the subtribe Platypleuriti, and two species of the genus Ugada, of the subtribe Hainanosemiiti. The resulting phylogenies support the synonymization of the monotypic genus Systophlochius with the widespread, speciose genus Platypleura; confirm the placement of Platypleura sp. 7 in that genus; and confirm the independence of Capcicada and Platypleura. Although the preliminary phylogeny lacks strong support at many nodes, it suggests that three radiations of Platypleura have occurred in southern Africa and that there was progressive southward speciation of these radiations. A novel modification of the ancestral area analysis further suggests that the group has an ancestral association with acacias but there were five independent speciation events associated with host- switching. These insights can be summarized by a general hypothesis that the mechanisms underlying platypleurine biodiversity in southern Africa involve two ancient vicariance events and subsequent speciation by vicariance, switching of plant associations, and changes of habitat preferences. We offer this example to illustrate how analysis of preliminary data can help to generate hypotheticodeductive research hypotheses, to provoke interest in testing these hypotheses, and to illustrate the utility of phylogenies beyond systematics.

Octopus vulgaris was identified as a new marine resource to be commercially exploited through an experimental fishery. A recent policy on developing fisheries in South Africa emphasizes the importance of investigating the economic feasibility of a fishery as part of its management framework. The study reported here generated baseline information necessary in the design of the experimental fishery, giving guidelines as to which vessels, fishing gear and markets would be most feasible. The proposed fishery, gear and vessel type, fishing techniques and expected catch rates are described, the results of market research are outlined, and the cost of fishing is estimated. The potential business should consist of small and medium-sized vessels deploying unbaited pots attached to long lines. The longline pot fishery could be economically feasible, provided a 30% catch in 6600 pots/month is attained. Only existing, debt-free vessels should be used. The minimum catch per unit effort (CPUE) for various fishing operation scenarios was calculated to determine economic feasibility. This is an estimated minimum CPUE, based on assumptions that cannot be confirmed until the fishery starts. Furthermore, this economic analysis also needs to be assessed by stakeholders with experience of fishery operations.

This study on Octopus vulgaris focused on the COIII gene region of mitochondrial DNA. Sequences from 21 samples from the Eastern Cape, and 14 samples from the Western Cape, were compared to determine whether different populations exist along the South African coast. A 380-bp segment of the COIII region of mtDNA was amplified using the polymerase chain reaction with specific designed primers. Phylogenetic inference was made using maximum parsimony (MP), maximum likelihood (ML), and distancebased methods. All sequences conformed to a single haplotype. Lack of variation within and between east and west coast samples precluded further population genetic analysis. The sequence obtained in this study was also compared with other sequences lodged in the Genbank database. Phylogenetically, the South African O. vulgaris is closely related to O. vulgaris from Senegal (0.67% divergence) and the Mediterranean (1.51% divergence). Within the Mediterranean group, O. vulgaris from South Africa displayed less sequence divergence from Senegalese and Mediterranean individuals than O. vulgaris from Venezuela (3.85%) and Taiwan (3.87%). These data do not, therefore, refute the hypothesis of a single O. vulgaris genetic population around the coast.

The Botany Department of Rhodes University is located in the historic Schonland Building. An indigenous garden was created in its courtyard, mainly of species of the Eastern Cape province, and its growth in diversity and stature mirrors the changes in the department over the years. Professor Selmar Schonland, the founding father of botany at Rhodes, was also the curator/director of the Albany Museum. Under his leadership, systematics was firmly established as a discipline at Rhodes and research on the flora of the Eastern Cape begun, to be continued to this day. Under professors William Isaac (1949–1951) and Edgar Twyman (1951–1973), plant physiology became an important area of study, and future leaders in physiology at other universities obtained degrees under them. Phycology and aquatic ecology became notable disciplines with Mary Pocock’s world-class work in the 1940s on freshwater and marine algae, which inspired others such as head of department Professor Stanley Seagrief (1958–1986) to develop these studies further. Mycology and microbiology were established as major subdisciplines under Noel Smith (1926–1948) and Twyman through to the 1960s, when the Department of Microbiology was established. Early studies in ecology owe their success to Tony Martin (1947–1956) and the link with the Grahamstown Botanical Research Station, when a sound base for plant ecology in the Eastern Cape was established. Coastal ecology became a major focus in the 1970s, when Roy Lubke and Ted Avis concentrated on dunes and the management of coastal regions. This led to the establishment of the Department of Environmental Science in the 1990s. The expertise of the botany staff in teaching and research in a variety of fields is reflected in the careers of its many students around the world.