In the modern dynamic engineering field, experimental dynamics is an important area of study. This area includes structural dynamics, structural control, and structural health monitoring. In experimental dynamics, methods to obtain measured data have seen a great influx of research efforts to develop an accurate and reliable experimental analysis result. A technical challenge is the procurement of informative data that exhibits the desired system information. In many cases, the number of sensors is limited by cost and difficulty of data archive. Furthermore, some informative data has technical difficulty when measuring input force and, even if obtaining the desired data were possible, it could include a lot of noise in the measuring data. As a result, researchers have developed many analytical tools with limited informative data. Subspace identification method is used one of tools in these achievements. Subspace identification method includes three different approaches: Deterministic Subspace Identification (DSI), Stochastic Subspace Identification (SSI), and Deterministic-Stochastic Subspace Identification (DSSI). The subspace identification method is widely used for fast computational speed and its accuracy. Based on the given information, such as output only, input/output, and input/output with noises, DSI, SSI, and DSSI are differently applied under specific assumptions, which could affect the analytical results. The objective of this study is to observe the effect of assumptions on subspace identification with various data conditions. Firstly, an analytical simulation study is performed using a sixdegree-of-freedom mass-damper-spring system which is created using MATLAB. Various conditions of excitation insert to the simulation test model, and its excitation and response are iv analyzed using the subspace identification method. For stochastic problems, artificial noise is contained to the excitation and followed the same steps. Through this simulation test, the effects of assumption on subspace identification are quantified. Once the effects of the assumptions are studied using the simulation model, the subspace identification method is applied to dynamic response data collected from large-scale 12-story buildings with different foundation types that are tested at Tongji University, Shanghai, China. Noise effects are verified using three different excitation types. Furthermore, using the DSSI, which has the most accurate result, the effect of different foundations on the superstructure are analyzed.