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DNA polymerase ε:structure of the human and mouse genes for the catalytic A-subunit, transcriptional regulation of the human gene for the B-subunit, and identification of DNA topoisomerase IIβ binding protein as a partner of DNA polymerase εHuang, D. (Deqi) 13 November 2000 (has links)
Abstract
The human and mouse genes POLE1 and Pole1 for the catalytic subunit of DNA polymerase ε contain
51 and 49 exons, respectively, and the human gene POLE2 for the B-subunit contains 19 exons. The human
POLE1 encodes three alternatively spliced mRNAs differing in their 5'-terminal sequence and in the N-termini of the predicted
proteins. The promoters for the major human transcript and the mouse Pole1 are G+C rich, TATA-less and contain putative
cis-acting elements typical of both S phase upregulated and serum responsive promoters. Interestingly, the three human
alternative transcripts are expressed from three promoters, and other structural features of POLE1 suggest that regulation of
its expression is complicated. The amino acid sequence of the catalytic subunit deduced from the mouse cDNA shows remarkable evolutionary
conservation in the DNA polymerase ε family. Interestingly, several conserved elements involved in template-primer binding differ from those of
other class B DNA polymerases. This is likely to reflect a distinctive function of the enzyme. The mouse Pole1 was localized to
chromosome 5 region E3-E5.
The expression of the human POLE2 encoding the B-subunit of DNA polymerase ε is dependent on cell proliferation in a
late serum-responsive manner. This is typical for DNA replication-related proteins. The promoter, which utilizes multiple transcriptional initiation
sites, is G+C rich and lacks a TATA-box. A 75 bp core promoter region is located within exon 1 and contains an Sp1 element as a critical determinant
of the promoter activity. Two overlapping E2F elements adjacent to the Sp1 element are essential for full promoter activity and serum response.
Immediately downstream from the core promoter region reside binding sites for E2F1 and NF-1. POLE2 seems to be regulated by two
E2F-pocket protein complexes, one associated with Sp1 and the other with NF-1.
The complete cDNA of the human DNA topoisomerase IIβ binding protein (TopBP1) reveals a 170 kDa protein that contains eight BRCT-domains
and shows homology to S. cerevisiae Dpb11 and S. pombe Cut5/Rad4. The protein interacts physically with
human DNA polymerase ε as shown by co-immunoprecipitation. A peptide containing the 6th BRCT-domain and an antibody against this peptide inhibit
DNA replication in isolated nuclei, indicating that the protein is required for DNA replication. The expression of TopBP1 is proliferation-dependent
in a manner that is typical for replication proteins. The gene encoding TopBP1 was localized to chromosome 3q21-q23.
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