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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Expression of a synthetic gene encoding a multi-epitopic antigen for toxoplasma gondii.

January 2004 (has links)
Ng Wai-yan. / Thesis submitted in: September 2003. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2004. / Includes bibliographical references (leaves 200-225). / Abstracts in English and Chinese. / Statement --- p.iii / Acknowledgments --- p.iv / Abbreviations --- p.v / Abstract --- p.vii / Abstract (Chinese version) --- p.ix / Table of contents --- p.xi / List of Figure --- p.xx / List of Table --- p.xxiii / Chapter Chapter 1 --- : General Introduction --- p.1 / Chapter 1.1 --- Toxoplasma gondii and Toxoplasmosis --- p.1 / Chapter 1.1.1 --- Biology and life cycle of Toxoplasma gondii --- p.2 / Chapter 1.2 --- Treatment of Toxoplasmosis --- p.4 / Chapter 1.2.1 --- Chemotherapy --- p.4 / Chapter (a) --- Pyrimethamine and sulfadiazine --- p.4 / Chapter (b) --- Clindamycin and Spiramycin --- p.4 / Chapter (c) --- Hydroxynaphthoquinones and new Macrolides --- p.5 / Chapter 1.2.2 --- Toxoplamsa Vaccine --- p.5 / Chapter (a) --- Vaccine using mutant strain of T. gondii --- p.6 / Chapter (b) --- Subunit vaccine --- p.6 / Chapter 1.3 --- The Immune Responses --- p.8 / Chapter 1.3.1 --- Protective immune responses --- p.8 / Chapter (a) --- Cytokines involved in the immunity against T. gondii --- p.10 / IFN-γ: Role in resistance to infection --- p.10 / TNF-α: Synergetic Role with IFN-γ --- p.10 / IL-12: Role in T cell differentiation --- p.11 / IL-10: Role in immuno-regulation --- p.12 / Other cytokines --- p.12 / Chapter (b) --- Immunomodulatory role of Nitric oxide (NO) --- p.13 / Chapter (c) --- Humoral immunity against T. gondii --- p.13 / Chapter 1.3.2 --- Toxoplasma proteins known to elicit T cell-dependent immunity --- p.14 / Chapter (a) --- Surface antigen 1 (SAG1/ P30) --- p.16 / Chapter (b) --- Dense granules protein 2 (GRA2/ P28) --- p.17 / Chapter (c) --- Rhoptry protein 2 (ROP2/ P54) --- p.18 / Chapter 1.3.3 --- Appropriate vaccine design --- p.18 / Chapter 1.4 --- Aim of the study --- p.23 / Chapter Chapter 2 : --- Expression of the Synthetic Gene Encoding the Multi-epitopic Antigen (MEA) for Toxoplasma gondii in Escherichia coli --- p.25 / Chapter 2.1 --- Introduction --- p.25 / Chapter 2.1.1 --- Multi-epitopic antigen for T. gondii as vaccine --- p.26 / Chapter a) --- "Epitopes from Toxoplasma antigens, P30, GRA2 and ROP2" --- p.26 / "T-cell epitopes from P30 (aa 138-154, aa 191-209)" --- p.26 / T-cell epitope from ROP2 (aa 197-216) --- p.27 / T-and B-cell epitope from GRA2 (aa 171-185) --- p.27 / Chapter b) --- Helper T-cell epitope from tetanus toxin --- p.27 / Chapter c) --- Linker --- p.28 / Chapter 2.1.2 --- Escherichia coli Expression System --- p.31 / Chapter (a) --- The T7 RNA polymerase and T7 lac Promoter --- p.31 / Chapter (b) --- Other translational elements --- p.32 / Chapter (c) --- Fusion partner --- p.33 / Chapter (d) --- Choice of expression host strain --- p.33 / Chapter 2.2 --- Materials --- p.35 / Chapter 2.2.1 --- Bacterial strains --- p.35 / Chapter 2.2.2 --- Mouse strains --- p.35 / Chapter 2.2.3 --- Chemicals --- p.35 / Chapter 2.2.4 --- Nucleic acids --- p.36 / Chapter 2.2.5 --- Kits and reagents --- p.37 / Chapter 2.2.6 --- Antibodies --- p.37 / Chapter 2.2.7 --- Solutions --- p.38 / Chapter 2.2.8 --- Enzymes --- p.40 / Chapter 2.2.9 --- Primers --- p.40 / Chapter 2.3 --- Methods --- p.41 / Chapter 2.3.1 --- Design and synthesis of the synthetic gene encoding the multi-epitopic antigen for Toxoplasma gondii --- p.41 / Chapter 2.3.2 --- Cloning of the MEA into the E. coli expression vector --- p.41 / Chapter (a) --- Preparation of plasmid : pCRII-TOPO-MEA and pET30a+ --- p.43 / Chapter (b) --- PCR amplification of MEA from pCRII-TOPO-MEA --- p.44 / Chapter (c) --- Digestion and purification of the E. coli expression vector pET30a+ with Ncol --- p.44 / Chapter (d) --- Fill-in Ncol cut pET30a+ --- p.44 / Chapter (e) --- Purification of DNA fragment from agarose gel --- p.45 / Chapter (f) --- "Ligation of MEA fragment and Ncol cut, fill-in pET30a+" --- p.45 / Chapter (g) --- Preparation of DH5a competent cells --- p.46 / Chapter (h) --- Transformation of recombinant pET30a+-MEA --- p.46 / Chapter (i) --- PCR screening and plasmid preparation for the putative pET30a+- HisMEA --- p.46 / Chapter (j) --- Cycle sequencing reaction on putative plasmid pET30a+-MEA --- p.47 / Chapter 2.3.3 --- Expression and purification of his-tag MEA --- p.48 / Chapter (a) --- Expression profile of His-tag MEA production by IPTG induction --- p.48 / Chapter (b) --- SDS-polyacrylamide gel electrophoresis (SDS-PAGE) --- p.49 / Chapter (c) --- Estimation of His-tag MEA production in induced bacterial lysate --- p.50 / Chapter (d) --- Purification of His-tag MEA --- p.50 / Chapter (e) --- Braford Protein Microassay (Bio-rad) --- p.50 / Chapter 2.3.4 --- Characterization of his-tag MEA --- p.51 / Chapter (a) --- Western blot of induced bacteriallysate by monoclonal anti-his-tag antibody --- p.52 / Chapter (b) --- N'-terminal amino acid sequencing of His-tag MEA --- p.52 / Chapter (c) --- Western blot of His-tag MEA with seropositive serum of mice and human --- p.53 / Chapter (d) --- Preparation of Toxoplasma gondii lysate --- p.54 / Chapter (e) --- Western blot of purified his-tag MEA and T. gondii Lysate by anti- serum of recombinant his-tag MEA --- p.54 / Chapter 2.4 --- Results --- p.56 / Chapter 2.4.1 --- Design and synthesis of the synthetic gene encoding the multi- epitopic antigen for Toxoplasma gondii --- p.56 / Chapter 2.4.2 --- Cloning of MEA into E. coli expression vector --- p.59 / Chapter 2.4.3 --- Expression and purification of His-tag MEA --- p.61 / Chapter 2.4.4 --- Charterization of His-tag MEA --- p.67 / Chapter 2.5 --- Discussion --- p.73 / Chapter 2.5.1 --- Design and synthesis of the synthetic gene encoding the multi-epitopic antigen for Toxoplasma gondii --- p.73 / Chapter 2.5.2 --- Cloning of MEA into E. coli expression vector --- p.77 / Chapter 2.5.3 --- Expression and purification of His-tag MEA --- p.77 / Chapter 2.5.3 --- Characterization of His-tag MEA --- p.78 / Chapter Chapter 3: --- Immunological Studies of the Multi-epitopic Antigen (MEA) for Toxoplasma gondii in Mouse Models --- p.82 / Chapter 3.1 --- Introduction --- p.82 / Chapter 3.1.1 --- "Expression of P30, GRA2 and ROP2 in E. coli expression system" --- p.82 / Chapter (a) --- Expression of P30 --- p.82 / Chapter (b) --- Expression of ROP2 --- p.83 / Chapter (c) --- Expression of GRA2 --- p.84 / Chapter 3.1.2 --- Immunizations --- p.84 / Chapter (a) --- Choices of animals --- p.84 / Chapter (b) --- Adjuvants --- p.85 / Chapter 3.1.3 --- Measurements of cellular immune responses in vaccinated mice --- p.86 / Chapter 3.2 --- Materials --- p.87 / Chapter 3.2.1 --- Mouse strains --- p.87 / Chapter 3.2.2 --- Chemicals --- p.87 / Chapter 3.2.3 --- "Culture Medium, buffer and other solutions" --- p.87 / Chapter 3.2.4 --- Nucleic acids --- p.87 / Chapter 3.2.5 --- Kits and reagents --- p.88 / Chapter 3.2.6 --- Solutions --- p.88 / Chapter 3.2.7 --- Enzymes --- p.88 / Chapter 3.2.8 --- Primers --- p.89 / Chapter 3.3 --- Methods --- p.90 / Chapter 3.3.1 --- "Construction of pET-P30, pET-GRA2 and pET-ROP2" --- p.90 / Chapter (a) --- Construction of pET-GRA2 --- p.93 / Chapter (i) --- Preparation of total RNA from tachyzoite of T. gondii (RH strain) --- p.93 / Chapter (ii) --- Reverse-transcription polymerase chain reaction (RT-PCR) --- p.93 / Chapter (iii) --- Cloning of pET-GRA2 --- p.94 / Chapter (b) --- Construction of pET-ROP2 --- p.95 / Chapter 3.3.2 --- "Expression and characterization of his-tag P30, his-tag GRA2 and his-tag ROP2" --- p.95 / Chapter (a) --- "Expression profile of his-tag P30, his-tag ROP2 and his-tag GRA2" --- p.96 / Chapter (b) --- Western blot of induced bacterial lysate with mono-clonal anti-his-tag antibody --- p.96 / Chapter (c) --- Western blot of induced bacterial lysate with anti-serum against his-tag MEA --- p.97 / Chapter (d) --- "Purification of his-tag P30, his-tag GRA2 and his-tag ROP2 from induced bacterial lysate" --- p.97 / Chapter (e) --- "Western blot of his-tag P30, his-tag GRA2 and his-tag ROP2 with sero- positive serum of mice and human" --- p.98 / Chapter (f) --- "Western blot of T. gondii lysate by anti-serum against his-tag GRA2, his-tag P30 and his-tag ROP2" --- p.99 / Chapter 3.3.3 --- Measurement of cellular immune responses in his-tag MEA vaccinated mice --- p.99 / Chapter (a) --- Isolation of spleenocytes from vaccinated mice --- p.99 / Chapter (b) --- T-cell proliferation assay --- p.100 / Chapter (c) --- Determination of Thl/ Th2 cytokines expression profile by RT-PCR --- p.100 / Chapter 3.3.4 --- Protection efficacy of different vaccine constructs against lethal challenge --- p.102 / Chapter 3.4 --- Results --- p.102 / Chapter 3.4.1 --- Construction of pET-GRA2 and pET-ROP2 --- p.102 / Chapter 3.4.2 --- "Expression and characterization of his-tag P30, his-tag GRA2 and his-tag ROP2" --- p.106 / Chapter 3.4.3 --- Measurement of cellular immune responses in his-tag MEA vaccinated mice --- p.116 / Chapter 3.4.4 --- Protection efficacy of different vaccine constructs against lethal challenge --- p.119 / Chapter 3.5 --- Discussion --- p.121 / Chapter 3.5.1 --- Construction of pET-GRA2 and pET-ROP2 --- p.121 / Chapter 3.5.2 --- "Expression and characterization of his-tag P30, his-tag GRA2 and his-tag ROP2" --- p.121 / Chapter 3.5.3 --- Measurement of cellular immune responses in his-tag MEA vaccinated mice --- p.124 / Chapter 3.5.4 --- Protection efficacy of different vaccine constructs against lethal challenge --- p.126 / Chapter Chapter 4 --- : Expression of the multi-epitopic antigen in Arabidopsis thaliana --- p.129 / Chapter 4.1 --- INTRODUCTION --- p.129 / Chapter 4.1.1 --- Transgenic plants as vaccine production systems --- p.129 / Chapter (a) --- Advantages of using plants as bioreactor --- p.130 / Chapter (b) --- Transgenic plants for vaccine production --- p.131 / Chapter (c) --- Limitations --- p.135 / Chapter (i) --- Low yields --- p.135 / Chapter (ii) --- Plant-specific glycans --- p.135 / Chapter 4.1.2 --- Model plant - Arabidopsis thaliana --- p.136 / Chapter 4.1.3 --- Strategies for expressing the transgene (MEA) in plant --- p.137 / Chapter (a) --- Seed-specific phaseolin promoter --- p.138 / Chapter (b) --- Lysine-rich protein (LRP) as fusion partner --- p.138 / Chapter (c) --- Fusion protein with membrane anchor for targeting to specific vacuolar compartments --- p.139 / Chapter 4.2 --- MATERIALS --- p.141 / Chapter 4.2.1 --- Bacterial strains --- p.141 / Chapter 4.2.2 --- Arabidopsis strains --- p.141 / Chapter 4.2.3 --- Chemicals --- p.141 / Chapter 4.2.4 --- Antibiotics --- p.141 / Chapter 4.2.5 --- Nucleic acids --- p.141 / Chapter 4.2.6 --- Solutions --- p.142 / Chapter 4.2.7 --- Enzymes and buffers --- p.142 / Chapter 4.2.8 --- Primers --- p.143 / Chapter 4.3 --- METHODS --- p.144 / Chapter 4.3.1 --- Construction of plant expression vectors --- p.144 / Chapter 4.3.1.1 --- Strategy 1: Lysine-rich protein (LRP) fusion --- p.144 / Chapter a) --- Construction of pBI121/ Phaseolin Promoter/ LRP1/ MEA/ his-tag/ phaseolin terminator --- p.149 / Chapter b) --- Construction of pBI121/ Phaseolin Promoter/ LRPIIA/ MEA/ phaseolin terminator --- p.150 / Chapter 4.3.1.2 --- Strategy 2: Fusion proteins with membrane anchor for vesicle targeting to specific vesicle compartments --- p.151 / Chapter ai) --- Construction of pBI121/Phaseolin Promoter/ SP/ MEA/ 491/NOS terminator --- p.156 / Chapter aii) --- Construction of pBI121/Phaseolin Promoter/ SP/ MEA(J)/ 526/ NOS terminator --- p.157 / Chapter 4.3.1.3 --- Construction of transgenic control pBI121/phaseolin promoter/ MEA/ phaseolin terminator --- p.157 / Chapter 4.3.2 --- Agrobacterium-mediated transformation of Arabidopsis thaliana by vaccum infiltration --- p.160 / Chapter (a) --- Preparation of competent cell for Agrobacterium GV3101 --- p.160 / Chapter (b) --- Transformation of electro-competent agrobacterium with plant expression vector by electroporation --- p.160 / Chapter (c) --- PCR screening for agrobacterium carrying the desirable plant expression vector --- p.161 / Chapter (d) --- Vacuum infiltration --- p.161 / Chapter 4.3.3 --- Screening of homozygous transgenic plants with single insertion of transgene --- p.162 / Chapter 4.3.4 --- Detection of MEA or MEA fusion protein in transgenic plants --- p.163 / Chapter (a) --- Extraction of seed protein (Soluble and membrane fractions) --- p.163 / Chapter (b) --- Western blot of seed protein by anti-serum against HisMEA --- p.163 / Chapter 4.4 --- RESULTS --- p.164 / Chapter 4.4.1 --- Construction of plant expression vectors and transgenic A. thaliana --- p.164 / Chapter (a) --- Construction of pBI121/ phaseolin promoter/ LRPI or LRP II/ MEA/ Phaseolin terminator --- p.164 / Chapter (b) --- Construction of pBI121/ PP/ SP/ MEA(J)/ 491 or 526/ PT --- p.165 / Chapter (c) --- Construction of transgenic control pBI121/ PP/ MEA/ PT --- p.166 / Chapter (d) --- Agrobacterium-mediated transformation of A. thaliana --- p.167 / Chapter 4.4.2 --- Screening of homozygous transgenic plant with single insertion of transgene --- p.172 / Chapter 4.4.3 --- Molecular analysis of the MEA/ MEA fusion in transgenic plants --- p.181 / Chapter 4.5 --- DISCUSSION --- p.188 / Chapter 4.5.1 --- Construction of plant expression vector --- p.188 / Chapter 4.5.2 --- Screening of homozygous transgenic plant with single insertion of transgene --- p.189 / Chapter 4.5.3 --- Molecular analysis of transgenic MEA/ MEA fusion in transgenic plants --- p.190 / Chapter Chapter 5 --- : General Discussion --- p.193 / Chapter 5.1 --- Development of a vaccine for toxoplasmosis: current status --- p.193 / Chapter 5.1.1 --- Current status --- p.193 / Chapter (a) --- Vaccine for agricultural animals --- p.193 / Chapter (b) --- Other vaccine candidates and the protective response induced --- p.194 / Chapter 5.1.2 --- Appropriate vaccine design - the multi-epitopic antigen (MEA) --- p.194 / Chapter 5.2 --- "Expression, Characterization and Immunological studies of the MEA expressed in prokaryotic system" --- p.195 / Chapter 5.2.1 --- Expression and characterization of E. coli- expressed his-tag MEA --- p.195 / Chapter 5.2.2 --- Immunological studies on the E. coli- expressed his-tag MEA --- p.196 / Chapter 5.3 --- Expression of MEA in transgenic plants --- p.197 / Chapter 5.4 --- Preclinical Safety Assessment: Considerations in Vaccine Development --- p.198 / References --- p.200

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