Thesis (M.S.)--University of Delaware, 2006. / Principal faculty advisor: Daniel T. Simmons, Dept. of Biological Sciences. Includes bibliographical references.

Thesis (Ph.D. in Molecular Biology) -- University of Colorado Denver, 2007. / Typescript. Includes bibliographical references (leaves 198-221). Free to UCD affiliates. Online version available via ProQuest Digital Dissertations;

African horsesickness virus (AHSV) , a member of the genus Orbivirus in the family Reo viridae, is the aetiological agent of African horsesickness, a highly infectious non-contagious disease of equines. The AHSV virion is composed of seven structural proteins organised into a double layered capsid, which encloses ten double-stranded RNA segments. The double stranded (ds) RNA genome of AHSV encodes, in addition to the seven structural proteins, at least three non-structural proteins (NS1 to NS3). The assembly of viral proteins in AHSV-infected cells results in at least three characteristic particulate structures. The first of these structures are the complete virions and viral cores. Empty virions or particles that simulate the virion surface can be produced synthetically by the co-expression of various combinations of AHSV structural genes in insect cells. Apart from the core particles and complete virions, there are two additional structures observed in AHSV-infected cells. Unique virus-specified tubular structures, composed of NS1, are observed in the cytoplasm of all orbivirus-infected cells. The second structure, distinctive hexagonal crystals, is unique to AHSV and is composed entirely of VP7, the major core protein. The assembly of all these particles can be produced synthetically when expressed individually in an insect cell expression system. The aim of this investigation was first of all to investigate the structure and assembly of these structures and secondly to evaluate their use as vehicles for foreign immunogens. The NS1 gene of AHSV-6 was cloned as a complete and full-length cDNA fragment from purified dsRNA genome segment 5 and the complete nucleotide sequence determined. The gene was found to be 1749 bp in length with one major open reading frame (ORF) of 1645 bp, encoding a protein comprising 548 amino acids. The 5' and 3' termini of the gene were found to contain the conserved terminal hexanucleotide sequences of AHSV RNA fragments, followed by inverted heptanucleotide repeats. The deduced amino acid sequence was analysed and found to define a hydrophobic protein of 63 kDa. Antigenic profile analysis indicated a hydrophilic domain with relative high antigenicity in the C-terminus of the protein. This represents a possible insertion site for immunogenic epitopes. The cloned NS1 gene of AHSV-6 was modified at the 5' and 3' terminal ends to facilitate expression of the gene. In vitro expression yielded a protein corresponding to the predicted size of NS1. The gene was also expressed in insect cells, using a recombinant baculovirus and yields of approximately 1.0mg NS1 protein/106 cells were obtained. Expression of NS1 in insect cells resulted in the intracellular formation of tubular structures with diameters of 23 ±2 nm. Biophysical analysis of the AHSV tubules suggests that they are more fragile and unstable than BTV NS1 tubules. To gain more insight into the structure, assembly and the biochemical characteristics of AHSV cores and virions, a number of baculovirus multigene expression vectors have been developed and utilised to co¬express various combinations of AHSV genes. Cells infected with a dual-recombinant baculovirus, expressing AHSV-9 VP3 and VP7 genes, contained high levels of VP7 and low levels of VP3. The simultaneous expression of the two proteins resulted in the spontaneous intracellular assembly of empty multimeric core-like particles (CLPs) with a diameter of approximately 72 nm. These particles structurally resembled authentic AHSV cores in size and appearance. The yield of CLP production was low as a result of the insolubility of VP7, which aggregates preferably into large hexagonal crystal as well as the low yield of VP3. The interaction of CLPs with either VP2 or VP5 was investigated by co-infection of the VP3 and VP7 dual recombinant baculovirus with a VP2 or VP5 single recombinant baculovirus. Each of the outer capsid proteins interacted separately with CLPs. Co-expression of all four major structural proteins of AHSV, using two dual recombinant baculoviruses one expressillJg VP2 and VP3, the other VP5 and VP7, resulted in the spontaneous assembly of empty virus-like particles with a diameter of 82 nm. Although co¬expression of the different combinations of AHSV proteins was obtained, the levels of expression were low. This low levels of the AHSV capsid proteins and the aggregation of VP7 down regulated the assembly process. In order to investigate the possibility of the use of CLPs and VP7 crystals as particulate delivery systems, insertion analysis of VP7 was used to identify certain sequences in the VP7 protein that are not essential for the assembly of CLPs or trimer-trimer interactions in the crystals. Two insertion mutants of VP7 (mt177 and mt200) were constructed. In each case three unique restriction enzyme sites were introduced that coded for six amino acids. In mt177 these amino acids were added to the hydrophilic RGD loop at position 177-178 and for mt200 to amino acid 200 - 201. Both regions were located in the top domain of VP7. Insertion mt177 increased the solubility of VP7, but did not abrogate trimerisation and CLP formation with VP3. The yield of mutant CLPs was significantly higher than the normal CLPs, possibly due to the increased solubility and availability of VP7 trimers. Evidence about the size of an insert that can be accommodated by VP7 was provided by the insertion of a 101 amino acid region of VP2, containing a previously identified immunodominant region of VP2. The two chimeric VP7/TrVP2 proteins were investigated for their ability to form crystal structures and CLPs. The chimeric proteins did not produce the typical hexagonal crystal structure, but rather small ball-like structures. This investigation yielded valuable information regarding the structure and assembly of AHSV tubules, CLPs and VLPs. These findings also have practical value, since the multimeric structures can be utilised as delivery systems for immunogens, like the AHSV VP2 immunodominant epitopes. / Thesis (PhD (Genetics))--University of Pretoria, 2007. / Veterinary Tropical Diseases / unrestricted

A diarréia por rotavírus tem sido umas das principais causas de mortalidade infantil. Pesquisas, que relatam a presença de IgA no leite e colostro humanos reativos com o rotavírus. Nosso objetivo foi avaliar a presença de anticorpos IgA anti-G3P[2] em amostras de leite e colostro e anti-G9P[8] em amostras de leite pela técnica de ELISA, verificar sua capacidade neutralizante e analisar a reatividade pelo Immunoblotting. Todas as amostras apresentaram anticorpos detectados pelo ELISA e neutralização do vírus G3P[2] e G9P[8]. Não foi observada correlação entre os títulos de ELISA e os neutralizantes para G3P[2], mas para o sorotipo G9P[8] foi possível estabelecer uma correlação significante. As amostras reconheceram frações do antígeno viral no ensaio de Immunoblotting, mas não foi possível estabelecer uma correlação entre altos títulos e alguma fração antigênica específica. Este trabalho fornece subsídios para avaliações das estratégias de vacinação. / The rotavirus diarrhea is one of the main causes of infant mortality. Studies have shown the presence of IgA in milk and colostrum reactive with human rotavirus. Our aim was to evaluate the presence of IgA anti-G3P[2] in milk and colostrum samples and anti-G9P[8] in milk ones, evaluate the IgA reactivity by ELISA and evaluate the IgA reactivity by immunoblotting. In addition, this work aimed to verify the neutralizing all titles of the samples. All of them had antibodies reactive with G3P[2] and G9P[8] and showed varied neutralization titles. There was a significant correlation between anti-G9P[8] IgA titers and the neutralizing ones, but the same was not observed for serotype G3P[2]. All samples recognized some viral antigenic fraction in immunoblotting test, but it was not possible establish a correlation between high antibodies levels and some specific antigenic fraction. This approach may be important for studies concerning vaccination strategies.

A diarréia por rotavírus tem sido umas das principais causas de mortalidade infantil. Pesquisas, que relatam a presença de IgA no leite e colostro humanos reativos com o rotavírus. Nosso objetivo foi avaliar a presença de anticorpos IgA anti-G3P[2] em amostras de leite e colostro e anti-G9P[8] em amostras de leite pela técnica de ELISA, verificar sua capacidade neutralizante e analisar a reatividade pelo Immunoblotting. Todas as amostras apresentaram anticorpos detectados pelo ELISA e neutralização do vírus G3P[2] e G9P[8]. Não foi observada correlação entre os títulos de ELISA e os neutralizantes para G3P[2], mas para o sorotipo G9P[8] foi possível estabelecer uma correlação significante. As amostras reconheceram frações do antígeno viral no ensaio de Immunoblotting, mas não foi possível estabelecer uma correlação entre altos títulos e alguma fração antigênica específica. Este trabalho fornece subsídios para avaliações das estratégias de vacinação. / The rotavirus diarrhea is one of the main causes of infant mortality. Studies have shown the presence of IgA in milk and colostrum reactive with human rotavirus. Our aim was to evaluate the presence of IgA anti-G3P[2] in milk and colostrum samples and anti-G9P[8] in milk ones, evaluate the IgA reactivity by ELISA and evaluate the IgA reactivity by immunoblotting. In addition, this work aimed to verify the neutralizing all titles of the samples. All of them had antibodies reactive with G3P[2] and G9P[8] and showed varied neutralization titles. There was a significant correlation between anti-G9P[8] IgA titers and the neutralizing ones, but the same was not observed for serotype G3P[2]. All samples recognized some viral antigenic fraction in immunoblotting test, but it was not possible establish a correlation between high antibodies levels and some specific antigenic fraction. This approach may be important for studies concerning vaccination strategies.

A hantavirose (infecção por Hantavírus) é uma das zoonoses que vem preocupando as autoridades sanitárias de todo o mundo. Sua ocorrência se deve principalmente os distúrbios ecológicos é transmitida ao homem através de inalação de partículas virais contida na excreta de roedores. São conhecidas duas doenças humanas distintas causadas pelo Hantavírus: a Febre Hemorrágica com Síndrome Renal (FHSR) e a Síndrome Pulmonar e Cardiovascular (SPCVH). O objetivo deste estudo foi verificar a ocorrência de anticorpos IgG anti-hantavírus, através do ELISA, em populações da Amazônia e Sudeste brasileiro, que vivem em contato com os roedores silvestres, utilizando a proteína recombinante do vírus Araraquara expressa em Escherichia coli. Do total de estudados 1308 soros humanos estudados, na Amazônia (1078) encontramos 59 soros positivos (5%). Na cidade Machadinho do OesteRO os soros coletados durante o ano 2003, foram analisados 638, onde foram encontrados 20 soros positivos (4,5%); e no Rio Machado RO. foram analisados 435 soros da população ribeirinha onde foram encontrados 39 (5%) soros positivos, respectivamente. Após análise realizada em 151 soros humanos provenientes do Vale do Ribeira, em 2007; e 84 no Pontal do Paranapanema, em 2008, foram observados 14 positivos (9%) e 6 (7%) das amostras, respectivamente. / The genus Hantavirus of the family Bunyaviridae includes a large number of rodent-borne viruses that are distributed worldwide. The occurrence is due mainly to ecological disturbances and it is transmitted to the humans through inhalation of virus particles contained in the excreta of wild rodents. Two different human diseases known to be caused by Hantavirus: are Hemorrhagic Fever with Renal Syndrome (HFRS) and Hantavirus Cardiopulmonary Syndrome (HPS). The main objective of this study was detected antibody against hanatavirus (IgG) by ELISA, in Amazon region and Brazilian Southwest populations who live in contact with the wild rodents, using recombinant protein (antigen) of the Araraquara virus expressed in Escherichia coli. We study 1308 human sera (1078 from Amazon region) and there were found 59 (5%) positive sera. From the city of Machadinho do Oeste RO (2003 year), 633 sera were analysed, where there were found to be 20 positive (4.5%) serums. In Machado river RO (2005 year), 435 sera of the river-dwelling population were analysed where there were found 39 (5%) positive sera, respectively. After analysis was accomplished for 151 human sera coming from the Vale do Ribeira - SP, in 2007, and 84 from the Pontal do Paranapanema - SP, in 2008, 14 (9%) and 6 (7%) of the samples were observed to be positive, respectively.

A hantavirose (infecção por Hantavírus) é uma das zoonoses que vem preocupando as autoridades sanitárias de todo o mundo. Sua ocorrência se deve principalmente os distúrbios ecológicos é transmitida ao homem através de inalação de partículas virais contida na excreta de roedores. São conhecidas duas doenças humanas distintas causadas pelo Hantavírus: a Febre Hemorrágica com Síndrome Renal (FHSR) e a Síndrome Pulmonar e Cardiovascular (SPCVH). O objetivo deste estudo foi verificar a ocorrência de anticorpos IgG anti-hantavírus, através do ELISA, em populações da Amazônia e Sudeste brasileiro, que vivem em contato com os roedores silvestres, utilizando a proteína recombinante do vírus Araraquara expressa em Escherichia coli. Do total de estudados 1308 soros humanos estudados, na Amazônia (1078) encontramos 59 soros positivos (5%). Na cidade Machadinho do OesteRO os soros coletados durante o ano 2003, foram analisados 638, onde foram encontrados 20 soros positivos (4,5%); e no Rio Machado RO. foram analisados 435 soros da população ribeirinha onde foram encontrados 39 (5%) soros positivos, respectivamente. Após análise realizada em 151 soros humanos provenientes do Vale do Ribeira, em 2007; e 84 no Pontal do Paranapanema, em 2008, foram observados 14 positivos (9%) e 6 (7%) das amostras, respectivamente. / The genus Hantavirus of the family Bunyaviridae includes a large number of rodent-borne viruses that are distributed worldwide. The occurrence is due mainly to ecological disturbances and it is transmitted to the humans through inhalation of virus particles contained in the excreta of wild rodents. Two different human diseases known to be caused by Hantavirus: are Hemorrhagic Fever with Renal Syndrome (HFRS) and Hantavirus Cardiopulmonary Syndrome (HPS). The main objective of this study was detected antibody against hanatavirus (IgG) by ELISA, in Amazon region and Brazilian Southwest populations who live in contact with the wild rodents, using recombinant protein (antigen) of the Araraquara virus expressed in Escherichia coli. We study 1308 human sera (1078 from Amazon region) and there were found 59 (5%) positive sera. From the city of Machadinho do Oeste RO (2003 year), 633 sera were analysed, where there were found to be 20 positive (4.5%) serums. In Machado river RO (2005 year), 435 sera of the river-dwelling population were analysed where there were found 39 (5%) positive sera, respectively. After analysis was accomplished for 151 human sera coming from the Vale do Ribeira - SP, in 2007, and 84 from the Pontal do Paranapanema - SP, in 2008, 14 (9%) and 6 (7%) of the samples were observed to be positive, respectively.