Abstract Mycorrhizal symbiosis is generally advantageous for plants in nutrient-poor soils. Arcto-alpine areas are relatively nutrient-poor, but abundantly inhabited by non-mycorrhizal species. Possibly, mycorrhizal symbiosis is not favoured due to the harsh climatic conditions and the short growing season, which constrain the photosynthetic gain and growth of the arcto-alpine plants. This hypothesis was theoretically evaluated by assuming that optimal mycorrhizal colonization maximizes the net carbon gain of the host plant. In addition, the prevalence of arbuscular mycorrhizal (AM) and dark-septate endophytic (DSE) fungi along an altitudinal gradient was studied in the field, and their effects on the plant performance were tested in the laboratory. In the model, the photosynthetic nutrient use efficiency (PNUE) had a key role in determining whether mycorrhizal strategy would be optimal for the plant net carbon gain. The model generated several colonization patterns depending on possible changes in PNUE and soil nutrient concentrations along altitudinal gradients. Field studies indicated that species-level colonizations do not yield a consistent pattern along the altitude except for fine endophyte, which increased along an altitudinal gradient. In a high-alpine field site root fungal colonizations were rare. Seasonal shifts in colonizations in low-alpine conditions were not found. DSE fungi were common root-associates in the field. In the laboratory, AM had a positive impact on the performance of Gnaphalium norvegicum at 15°C, but not at 8°C. DSE-inoculation did not colonize the roots, but it had a positive impact on seedling performance, which may be due to the saprophytic activity of the fungus in the substrate. Additionally, mycorrhizal inoculum was found to decrease the performance of a non-mycorrhizal plant in a competition experiment. Species-level mycorrhizal colonization patterns may differ from community-level pattern along altitudinal gradients and the relative abundance of different fungal symbionts may change along with the altitude. The performance of mycorrhizal plants in high-alpine conditions may be decreased due to several factors e.g. low temperature constraints on plant and fungal physiology and allocation, soil disturbances and low availability of inoculum. Climatic constraints for plant photosynthesis may thus affect the mycorrhizal colonization patterns in arcto-alpine conditions, but are not necessarily the primary cause for lower performance of mycorrhizal plants at higher altitudes.

Existing evidence suggested that nursery inoculation with Trichoderma harzianum and arbuscular mycorrhizal fungi (AMF) could reduce deleterious effects of biotic and abiotic stresses and improve seedling quality, fruit yield and quality of tomato (Solanum lycopersicum L.). However, studies of their combined inoculation on seedling growth, fruit yield and quality of tomato plants are not well-documented. Experiments were carried out to investigate the combined effect of T. harzianum and AMF on tomato crop performance under various conditions. When combined with a T. harzianum and AMF mixture, seaweed extract from Ecklonia maxiama inhibited AMF root colonisation of tomato seedlings. Treating seedlings with a mixture of T. harzianum and AMF reduced the incidence of Verticillium wilt in tomato grown in a nethouse at early season, with negligible effect on fruit yield. Further investigations were initiated to find out whether T. harzianum and AMF were efficient when applied as a mixture or alone, at different inoculation times. Co-inoculation with T. harzianum and AMF (Glomus mosseae) improved seedling growth and development, except when both fungi were simultaneously applied two weeks after sowing. When the seedlings were allowed to grow up until full harvest in a greenhouse, both fungal inoculants increased total yield and marketable yield, but these increases were not significant. Furthermore, inoculation with AMF increased the percentage of extra-large fruit. Field experiments conducted under commercial tomato production confirmed greenhouse studies. Inoculation of tomato with T. harzianum and AMF, either alone or in combination increased early fruit yield (four first harvesting weeks). Throughout the studies, percentage AMF root colonisation in seedlings and plants remained low, despite nursery inoculation. Field experiments investigated the effects of AMF-inoculated transplants combined with biochar-amended soils on AMF root colonisation and their resultant effects on overall crop performance and microbial community structure. Biochar had no effect on AMF root colonisation, and also when combined with AMF, it had no influence on tomato productivity. Interestingly, biochar altered the fungal community while AMF might have influenced the bacterial community such as plant-growth promoting rhizobacteria, which are associated with improved plant growth, nutrient uptake and disease control in the rhizosphere. These benefits could contribute to improved yield and fruit quality. In conclusion, although the results were variable, there was a clear indication that T. harzianum and AMF can play an important role in tomato production. / Thesis (PhD)--University of Pretoria, 2012. / Plant Production and Soil Science / unrestricted

No description available.

Arbuscular mycorrhizal (AM) fungi are obligate biotrophs that formsymbiosis with plants by colonizing their roots. The fungus supplies thehost plant with various nutrients, including phosphorus. Phosphorus iscrucial for the development of plants and is hard to acquire in soilsince it can be scarce and has a slow motility. The fungus utilizes itslong hyphal threads to contact more soil to obtain phosphorus andtransport it back to the plant. It does so with its use of differentphosphorus transporters (PTs) located in its membranes. Here we havedone a phylogenetic analysis of different PTs from a variety of fungifrom different phyla together with plants and new sequence data from AMfungi. In total, 955 genomes were screened, 26 of which belong to AMfungi. This work resulted in a database of 1351 PT sequences, 907 fromfungi (243 from AM) and 444 from plants, and two phylogenetic trees tovisualize the data. One phylogeny was made of the branch of the PT Pho87which was selected for building a Hidden Markov model, which canfacilitate future searches of PTs.

Arbuscular mycorrhizal fungi (AMF) are a group of root obligate symbionts that are part of the fungal sub-phylum Glomeromycotina, which provide water, nutrients, and pathogen protection to about 80% of land plants in exchange for their photosynthetic products. AMF thus act as “biofertilizers”, have a profound effect and influence on the biodiversity of plants, and play a major role in life on land. From an evolutionary point of view, AMF are a puzzling group of organisms, thought to have propagated for over 400 million years without sexual reproduction, a rarity among eukaryotes. However, this assumption is largely based on the absence of definitive observations of sexual reproduction through microscopic tools. One clue into the sexual activity of AMF is evidence of a dikaryotic-like genome organization in their multi-nucleated mycelium. The recent identification of multi-allelic mating-type loci (MAT locus) potentially places AMF among other heterothallic or bipolar species, who’s mating compatibility is determined by their MAT locus. The presence of a hidden sexual cycle in AMF is still a possibility, and recent findings on the meiotic gene content of AMF suggests an alternative narrative to how these fungi have escaped extinction for so long. Seven meiosis-specific genes (MSG) were found to exist in AMF, indicating that these fungi are likely undergoing a cryptic sexual cycle. The main goal of this research is to determine if/when MSG are expressed in an in-vitro model of AMF. To build onto this research, we established crossings between isolates with hypothetically compatible mating types, in order to determine if fusion of their hyphae can trigger the expression of MSG. Together, these experiments will assess expression at varying stages of the putative cycle of sexual reproduction and give further insight into the elusive sexual life of AMF.

A continuously growing world population with a projected size of more than 9 billion inhabitants in the year 2040 requires huge efforts in food production while concurrently avoiding adverse side effects such as the use of pesticides or fertilizers. Among them phosphorous (P) is an important mineral fertilizer for which only few renewable sources exist and which is becoming increasingly scarce. Therefore, methods to reduce P fertilization or enhance fertilization efficiency are urgently needed. One idea is to look how plants in natural ecosystems cope with the problem of nutrient limitation. A strategy, found in almost all plant species is interaction with mycorrhizal fungi. Plants usually deliver carbohydrates (C) to the fungi and get nutrients, like phosphorous (P), in exchange. In natural ecosystems, plants usually interact with multiple fungi which perform differently in their P delivery. However, in agro-ecosystems not all these fungi are helpful. Fungi which are carbon demanding but deliver just few P, might even result in lower plant growth. Therefore a deep knowledge of the mechanisms driving the P and C dynamics is necessary. This can be gained by a computer simulation model which is possible to examine the influence of different nutrient exchange strategies in detail and make prediction how they perform. In this PhD thesis, a spatially explicit simulation model of arbuscular mycorrhizal fungi (AMF) was developed and specific laboratory experiments have been conducted and used for model calibration. This model has been used to evaluate the performance of different nutrient exchange strategies by the emerging maximum achievable fungal biomass, the C uptake rate from the plant and the P delivery rate to the plant. On this basis, three functional types could be identified: parasitic type, intermediate type, mutualistic type. In further steps these functional types have been used to investigate their performance to smooth temporal P pulses (i.e., by transforming them into a continuous P flux delivered to the plant) and to take up spatially heterogeneously distributed P. In both cases, the mutualistic type was found to perform worst and parasitic type best. Two key mechanisms for efficient resource use in spatiotemporally heterogeneous environments could be identified. By the ability of quick fungal biomass growth, AMF can efficiently explore space and store P inside the fungal mycelium. By the creation of spores that do not need C for 6 maintenance, AMF can use the saved C to grow new hypha for further spatial exploration. Through these two mechanisms AMF are able to adapt their mycelium to the spatial and temporal conditions of the P distribution and thus have the potential to largely enhance Puse efficiency. This finally might reduce the application of P fertilizers.

A dissertation submitted to the Faculty of Science, University of the Witwatersrand, Johannesburg, in fulfilment of requirements for the degree of Master of Science. / Phytoremeditation of mine tailings provides the most cost-effective means of alleviating their pollutant effects. Research has shown that successful revegetation of mine tailings can be optimised by providing appropriate microbial symbionts for the plants. The aim of this study was to assess the arbuscular mycorrhizal (AM) status of trees currently being used for phytoremediation trials of mine tailings in the Welkom gold fields, and to determine the AM fungal diversity of these sites. The Acacia spp. analysed were growing on rehabilitated gold and uranium mine tailings which had undergone different rehabilitation regimes. Planted acacia trees which had been inoculated with crude AM fungal inocula were present on one mine tailing site as compared to the second mine tailing site on which the acacias were naturally colonisers and the site had been ameliorated with garden refuse. Root and slime samples were collected in early spring and half if each initial sample was used immediately for colonisation analysis and to identify AM fungi through molecular analysis of the small subunit rRNS gene sequences; the other half of each sample was used to produce trap cultures which were used later for colonisation and molecular analysis. Total AM fungal colonisation of initial samples for planted acacies was 19 % and for naturally colonising acacias was 66 %. The total AM fungal colonisation of trap culture samples for planted acacias increased to 32 % and for naturallhy colonising acacias it increased to 78 %. Spore counts of initial samples averaged 402 spores per 100 g-1 soil for planted acacias and 455 spores per 100 g-1 soil for naturally colonising acacias. For trap culture samples, spore counts decreased by approximately 50 %. The AM fungi identified fell within 8 genera, namely, Diversispora, Rhizophagus, Scutellospora, Claroideoglomus, Cetraspora, Sclerocystis, Glomus and Redecker. The study represents a first report utilising molecular biosystematics with AM fungal DNA from colonised roots as the template. The results will assist in making decisions about future AM fungal surveys and applying AM fungal inoculum in phytoremediation trials of mine waste sites. Key words: Phytoremediation, mine tailings, arbuscular mycorrhizal (AM) fungus, Acacia, molecular identification, SSU rRNA gene sequence

No description available.

No description available.

Arbuscular mycorrhizal fungi (AMF) are an ancient group of obligate symbionts, colonizing the roots of over 72% of land plants, increasing the uptake of nutrients from the soil, and providing many fitness benefits to their host plants. The multinucleate and coenocytic nature of AMF have interested researchers for decades, leading to many theories of the evolution, and genetic organization of these organisms. Recent findings propose that AMF carry two types of strains, identified based on putative MAT-loci, as either homokaryotic, carrying multiple and genetically similar nuclei, or dikaryotic with co-existing nuclei deriving from two parental strains. In other fungi, hyphal fusions, or anastomosis, between compatible strains results in nuclear transfer, creating heterokaryotic spore progeny. It has been hypothesized that dikaryotic AMF strains arose from the anastomosis between compatible homokaryons harbouring different nucleotypes. The goal of this research is to determine whether anastomosis events, known to occur in other fungi, like homokaryon-homokaryon, homokaryon-dikaryon (Buller phenomenon), and/or dikaryon-dikaryon nuclear exchanges also occur in AMF. To achieve this, the anastomosis frequencies between 15 crosses of homokaryotic and dikaryotic strains of the model AMF species Rhizophagus irregularis were examined using microscopy and droplet digital PCR (ddPCR) to determine if nuclear transfer between strains is possible. Overall, these experiments build on the existing evidence of compatible interactions between strains of R. irregularis.