This study analyzes tree, soil, and microtopographic patterns present within the Cranberry Glades, a bog wetland complex located in the mountains of West Virginia. The Cranberry Glades are comprised of four open bog meadows, which provide unique habitat to several rare and endangered plant species. However, these meadows are filling in with trees and alder. This research is a study on the factors that may be involved in the processes and patterns influencing tree encroachment into the bog meadows across the open meadow – bog forest ecotone. To determine the patterns of infilling and the potential relationships among the trees, microtopography, and soil conditions, I collected and analyzed data on each of these factors within nine belt transects located across the ecotone. I gathered tree data on the following: location within transect, species, diameter at breast height or diameter at ground level, height class, associated microtopography, and growing conditions on 1,389 trees. Soil samples were gathered across the ecotone and analyzed for percent moisture, pH, and various nutrients and metals. I assessed historical aerial photographs to gain a temporal history on the patterns of infilling. The results indicate that trees decrease in density across the ecotone towards the peatland interior, and that trees are likely to be growing on hummock features and within tree islands. Soil properties resulted in mixed conclusions. The aerial photograph assessment revealed that trees and alders have been steadily encroaching into the open peatlands for at least the past 52 years. The finding of this research lend to increased knowledge on southern peatlands, wetland succession, and the Cranberry Glades Botanical Area. / Master of Science

Invasive species introductions, namely the chestnut blight fungus (Cryphonectria parasitica) and hemlock woolly adelgid (Adelges tsugae), have permanently altered the overstory canopy of Appalachian forests by causing the dramatic die-offs of two ecologically significant tree species, American chestnut (Castanea dentata) and eastern hemlock (Tsuga canadensis). These canopy dominants once had significant roles in regulating understory communities. The loss of these trees, along with fire suppression, has driven two common evergreen shrubs, rosebay rhododendron (Rhododendron maximum) and mountain laurel (Kalmia latifolia), to expand and proliferate in areas where they were once restricted. These two common shrubs are recognized agents of change in Appalachian forests because of their abilities to modify soil seed banks, regulate light, and alter the local soil chemistry. This study documented evergreen shrub expansion across the Coweeta Creek basin over the past 36 years analyzing changes in winter greenness using harmonized multi-decadal archives of Landsat imagery. We found the greatest change in winter greenness in relatively dry areas: higher elevations (1275–1300 m), steeper slopes (33°–35°), southward aspects, and far from streams (600–800 m). Historical field data collected in three unmanaged watersheds at Coweeta showed a simultaneous decrease in T. canadensis and increase in R. maximum. We also documented the decline of a xerophytic canopy tree species, pitch pine (Pinus rigida), and an associate understory shrub, K. latifolia. Our analysis of the influence of terrain variables on evergreen shrub expansion allowed us to determine which of the two species was expanding in various locations with reasonable certainty. This study provides spatially explicit data on the expansion of two evergreen shrub species at the Coweeta Hydrologic Laboratory that could be used to pinpoint areas for future management interventions. / Master of Science / Forests in the eastern United States have changed substantially in response to the introduction of highly competitive invasive species. Some overstory tree species have been virtually eliminated from their functional role in regulating understory vegetation in many southern Appalachian ecosystems. Die-offs of these trees have allowed understory evergreen shrubs to expand into areas where they were once restricted. Shrubs that have expanded in response to overstory tree die-offs can alter the ecology of forests for the foreseeable future. Our work leveraged multi-decadal archives of wintertime satellite imagery to document the spread of understory evergreen shrubs in a watershed located in western North Carolina. We investigated the relationship of this spread to local environmental characteristics like elevation, steepness (slope), slope direction (north, south, east, west), and distance-from-stream. The greatest changes in evergreen vegetation were documented on terrain at relatively high elevations, locations farther from streams, on southerly aspects, and on relatively steep terrain. We included historical field data collected during the same time period that showed a simultaneous increase in two understory evergreen shrub species after the die-off of ecologically significant overstory tree species. This information will help forest managers by describing areas where substantial spread has occurred and potentially use this information to inform future management action.

Thesis (MSc)--Stellenbosch University, 2013. / ENGLISH ABSTRACT: Alien invasive species are a global concern not only threating biodiversity, but also negatively impacting regional economies. Consequently research aimed at understanding the invasion process is crucial for management of invasive alien species to reduce these impacts. Identifying accurate natal ranges is the key first step for efficient alien plant management, especially biological control. Such knowledge may assist in selecting host-specific biological control agents and help prevent non-target impact on native species. A case in point is the genus Cardiospermum of which species have been extensively moved around the globe with two species now being possible widespread invaders (C. grandiflorum and C. halicacabum), and a third species (C. corindum) having significant invasion potential. However, in some regions the native statuses of these species are not clear, hampering management. In order to minimize potential non-target impacts it is prudent to determine the relationships between Cardiospermum taxa in unknown native ranges prior to the release of biological control agents. With this thesis I aim to review available literature on the genus Cardiospermum, determine potential spread to suitable habitats globally for selected taxa, resolve unknown native ranges in southern Africa, and investigate rapid speciation of an endemic Namib Desert species of balloon vine. Through exhaustive searches for available literature on the genus Cardiospermum I report on the biology and ecology of selected species within the genus, with special focus on the most widespread species. Specifically, using species distribution modelling I investigate the potential spread of C. halicacabum, C. corindum and C. grandiflorum globally and assess the accuracy with which this can be determined using known native ranges to predict current alien ranges. Results indicate that these species have significant potential to spread, though highlighting that species distribution modelling over-fit predicted suitable ranges when using native range data alone. To resolve uncertain native ranges of selected species within the genus I reconstructed a dated multi-gene phylogeny and chloroplast haplotype network to investigate relationships within and among Cardiospermum species. I conclude that C. halicacabum is non-native in southern Africa due to polyphyletic relationships among accessions, while C. corindum is native due to natural long distance dispersal as indicated by a single monophyletic southern African clade. The close relationship observed between C. corindum and the African species, C. pechuelii, lead to a population-level genetic investigation of these two taxa. For this, I constructed a multi-gene phylogeny, chloroplast haplotype network and conducted population genetic diversity analyses which all indicated that the African arid adapted taxa, C. pechuelii, endemic to the Namib Desert of Namibia, evolved from C. corindum following long distance dispersal from South America. This study firstly provides insights into the ecology and biology of Cardiospermum, warning against further introduction due to potential spread. Secondly I resolved the unknown native statutes of Cardiospermum species in southern Africa and, lastly, illustrated the origin of African C. pechuelii. My research findings have major implications for on-going biological research against C. grandiflorum in South Africa and cautions strongly against the release of already-identified biological control agents due to their potential non-target impacts. / AFRIKAANSE OPSOMMING: Indringerspesies is 'n wêreldwye probleem as gevolg van hul direkte bedreiging van biodiversiteit asook hul negatiewe impakte op streeksekonomieë. Gevolglik is navorsing aangaande die indringingsproses van uiterste belang om doeltreffende beheer van indringerspesies te verseker. Die bepaling van die inheemse herkoms van indringerpopulasies is die eerste belangrike stap tot doeltreffende beheer, veral biologiese beheer. Hierdie informasie kan help met die identifisering van gasheer-spesifieke biologiese agente en om potensiële nie-teiken impakte op inheemse plant spesies verhoed. ‘n Voorbeeld is ballon rankplante in die genus Cardiospermum, waarvan verskeie spesies wêreldwyd verspreid is, met die gevolg dat minstens twee spesies (C. halicacabum en C. grandiflorum) nou moontlike wydverspreide indringers is en ‘n derde spesie (C. corindum) ook potensiaal toon as ‘n indringerspesie. In sommige streke is die in- of uitheemse statusse van hierdie spesies onbekend en belemmer gevolglik hul doeltreffende beheer. Met hierdie tesis streef ek om die genus Cardiospermum te hersien en potensiële verspreiding van geselekteerde spesies na geskikte habitatte te bepaal, om onbekende inheemse streke binne Suider-Afrika op te los en laastens, om die herkoms van ‘n ware Afrika spesie (C. pechuelii) te ondersoek. Na deeglike ondersoek van beskikbare literatuur doen ek verslag omtrent die biologie en ekologie van spesies binne Cardiospermum, met spesiale fokus op die mees wydverspreidste spesies. Deur gebruik te maak van spesies verspreidings modelle bestudeer ek die potensiaal van verdere verspreiding wêreldwyd vir C. halicacabum, C. corindum en C. grandiflorum en rapporteer ook omtrent die akkuraatheid van hierdie tegniek. Resultate toon dat alle spesies aansienlike potensiaal toon om verder te versprei, maar beklemtoon ook dat hierdie metode inheemse streek data “oor-aanpas”. Om enige onsekerhede aangaande inheemse streke op te los, het ek ‘n gedateerde multi-geen filogenie en ‘n chloroplas haplotipe netwerk opgetrek om die verhoudings binne en tussen geselekteerde Cardiospermum spesies te bepaal. Ek kom tot gevolgtrekking dat C. halicacabum nie inheems in Suider-Afrika is nie, as gevolg van polifiletiese verhoudings, en dat C. corindum inheems is en moontlik ook ‘n voorbeeld van natuurlike langafstand verspreiding, soos aangedui deur ‘n enkele monofiletiese groep. Die naverwante filogetiese verhouding tussen C. corindum en C. pechuelii het daartoe gelei dat ek die herkoms van C. pechuelii in Afrika ondersoek het. ‘n Multi-geen filogenie, chloroplas haplotipe netwerk en populasie genetiese diversiteit analises het aangedui dat C. pechuelii endemies is tot die Namib Woestyn van Namibië, en die produk is van lang afstand verspreiding van C. corindum vanaf Suid-Amerika. Hierdie studie gee eerstens insig tot die ekologie en biologie van Cardiospermum en waarsku teen verdere verspreiding. Tweedens dui my studie ook die opgeloste inheemse streke in Suider-Afrika aan van sekere Cardiospermum spesies, en laastens, illustreer ek die herkoms van C. pehuelii. My navorsing het baie belangrike gevolge vir die huidige biologiese beheer program teen C. grandiflorum in Suid-Afrika en waarsku teen die vrystelling van reeds geïndentifiseerde biologiese beheer agente weens potensiële nie-teiken impakte op inheemse spesies.

No description available.

This study identifies the biogeographic factors that structure small mammal communities on mountains of the Colorado Plateau and adjacent regions. Forty six isolated ranges were characterized across a 5-state study area encompassing the Colorado Plateau, including the central high plateaus of Utah and the Basin and Range Province (i.e. the Great Basin and mountains of Arizona and New Mexico). Presence/absence data of 25 montane mammal species were used to explore the interactions between historical and ecological processes affecting local and regional diversity patterns. Multivariate analyses, such as non-metric dimensional scaling, were used to explore factors which influence community composition. Results of these analyses revealed the Colorado River as a significant biogeographic barrier that affects montane mammal community structure. MtDNA cytochrome b sequence variation was analyzed among populations of the long-tailed vole, Microtus longicaudus, sampled from five interior ranges of the Colorado Plateau- Abajo, LaSal, Henry, and Chuska Mts., and Boulder Mountain of the Aquarius Plateau-and analyzed using traditional phylogenetic approaches (parsimony and likelihood) as well as nested clade analysis. Results support previous documentation of a major east-west phylogeographic break occurring between populations southeast of the Colorado River (eastern Arizona, Colorado, Wyoming and New Mexico) and all other western populations, which include a central clade, a northwest clade, and an Alaskan island clade. Evidence also supports differentiation of a 'southern Rockies' clade and a distinct 'southwest island' clade. Populations of M. longicaudus north and west of the Colorado River (Boulder and Henry Mts.) share two haplotypes, form a well-supported subclade with populations from the Kaibab plateau, and are closely related to the Northwest clade. Past approaches to studying montane mammal communities utilizing theory based on island biogeography have overemphasized area and isolation as the only forces structuring insular communities. As a result, there has been a lack of recognition of the influences of environmental factors, species turnover, and barriers that create and maintain regional diversity on the Colorado Plateau and adjacent areas.

La classification actuelle de la famille des Phytoseiidae n'est pas basée sur de réelles études phylogénétiques et par conséquent, de nombreuses questions se posent sur la validité des taxa supra-spécifiques mais également vis-à-vis des taxa spécifiques. Ce travail de thèse avait donc pour objectif de répondre à de telles questions pour deux genres : Phytoseiulus et Neoseiulella, en utilisant pour la première fois des approches phylogénétiques moléculaires et morphologiques. Ces études phylogénétiques ont été également associées à des études biogéographiques. Les résultats obtenus par ces deux approches sont congruents et semblent montrer que ces deux genres ne sont pas monophylétiques : le genre Phytoseiulus semble au mieux paraphylétique, tandis que le genre Neoseiulella serait polyphylétique. Ces résultats sont différents de ceux développés dans les diverses révisions successives de ces deux taxa. Ce travail de thèse a permis de répondre également à des questionnements sur cinq synonymies au sein du genre Neoseiulella. L'étude de pratiquement tous les types des espèces du genre Neoseiulella nous a permis de redéfinir le genre, en excluant trois espèces et en discutant certaines synonymies. Une clé d'identification des adultes femelles des espèces valides a également été proposée. Des études complémentaires, notamment des analyses moléculaires, seront nécessaires afin de conclure plus définitivement sur les relations évolutives entre les taxa étudiés / The present classification of the family Phytoseiidae is not based on solid phylogenetic studies and therefore, many taxonomic questions still arise, concerning the validity of supra-specific and specific taxa identified to-date. This thesis thus aimed to answer such questions for two genera, Phytoseiulus and Neoseiulella, using for the first time molecular and morphological phylogenetic analyses. Biogeographic analyses have been also carried out. Results obtained by both morphological and molecular approaches are congruent and seem to show that both genera are not monophyletic: Phytoseiulus seems paraphyletic whereas Neoseiulella seems polyphyletic. These results are different from those obtained with previous revisions of these two taxa. Furthermore, this study allowed to conclude on five synonymies within the genus Neoseiulella. The observation of nearly the totality of the species belonging to the genus Neoseiulella permitted to redefine this genus, excluding three species and discussing some synonymies. Lastly, an identification key of the adult females was proposed for the valid species of the genus Neoseiulella. Further experiments, including molecular investigations, are however still required in order to obtain more reliable conclusions on the evolutionary relationships of the studied taxa.

We report a new chameleon-like Anolis species from Hispaniola that is ecomorphologically similar to congeners found only on Cuba. Lizards from both clades possess short limbs and a short tail and utilize relatively narrow perches, leading us to recognize a novel example of ecomorphological matching among islands in the well-known Greater Antillean anole radiation. This discovery supports the hypothesis that the assembly of island faunas can be substantially deterministic and highlights the continued potential for basic discovery to reveal new insights in well-studied groups. Restricted to a threatened band of midelevation transitional forest near the border of the Dominican Republic and Haiti, this new species appears to be highly endangered.

The genus Schefflera is the largest in Araliaceae, with approximately 900 species. Recent studies have shown that Schefflera is polyphyletic and represents no fewer than five distinct clades, each corresponding to a specific geographic region including Asia, continental Africa and Madagascar, Melanesia, the Neotropics, and a small clade distributed throughout several islands in the insular Pacific Ocean. The Afro-Malagasy clade contains nearly 50 species distributed throughout tropical, sub-Saharan Africa, Madagascar, the Comoros, and the Seychelles islands. Previous studies have suggested that this group is monophyletic, identifying two smaller subclades within Afro-Malagasy Schefflera corresponding roughly to informal groups identified as “Meiopanax” and “Sciodaphyllum” on the basis of morphology. Using sequence data from nuclear rDNA spacers and plastid markers derived from 32 of the 48 currently circumscribed species of Afro-Malagasy Schefflera, this study tested the monophyly of Afro-Malagasy Schefflera and of each of its two proposed subclades. Trees based on this molecular data were used to examine patterns of morphological evolution and biogeography among species in the clade. Results support the monophyly of Afro-Malagasy Schefflera and both subclades, which correspond closely to “Meiopanax” and “Sciodaphyllum” which are herein referred to as Neocussonia and Astropanax, respectively. Additional interspecific relationships were examined, which provides evidence for hybridization among several species. Schefflera myriantha, the most widely distributed species of Afro-Malagasy Schefflera, is paraphyletic with respect to two other species, S. humblotiana and S. monophylla. Many morphological features historically used to distinguish species of Afro-Malagasy Schefflera appear to be evolutionarily labile, with a history of gains and losses (e.g., reduction in leaflet number, which occurs independently in both subclades). Biogeographic analyses suggest an African ancestry for the entire Afro-Malagasy Schefflera clade, and for both subclades, with two independent divergence events to Madagascar.

Schefflera is the largest genus in the angiosperm family Araliaceae, with about 900 species, of which c. 300 belong to five subgeneric groups in the Neotropical region. Previous phylogenetic studies of Schefflera have been limited to a small number of species from this region, and very little is know about phylogenetic relationships in the Brazilian-centered Didymopanax group of this genus. Therefore, to gain a better understanding of the diversity and evolution of the Didymopanax group of Schefflera, I investigated the systematics of these plants in the broader context of the entire Neotropical clade. The main goals were (1) to investigate pollen diversity in Neotropical species of Schefflera; (2) to test the monophyly of these species; (3) to provide a taxonomic revision for species of the Didymopanax group of Schefflera; and (4) to investigate evolutionary relationships within the Didymopanax group. Pollen morphology exhibits an uneven variability across Neotropical Schefflera. For example, pollen characters support the distinctiveness of the Didymopanax group from all remaining groups. Moreover, S. tremula has a distinctive pollen morphology compared to remaining species of the Sciodaphyllum group. However, among the remaining groups of Neotropical Schefflera, pollen characters are less distinctive. Molecular phylogenetic analyses have confirmed the monophyly of the Neotropical species of Schefflera, and helped to identify four major clades. One of these clades includes subclades representing the Didymopanax and Crepinella groups, while another clade includes all species from groups Cotylanthes and Sciodaphyllum, excluding Schefflera tremula, a finding that corroborates pollen data. In the formal taxonomic revision of Didymopanax, 37 species are recognized, together with three insufficiently known species. The revision also includes updated species circumscriptions and nomenclatural adjustments for 26 names. Phylogenetic analyses among Didymopanax species recovered four morphologically and geographically coherent clades (Atlantic Forest, Imeri, Five-carpellate and Savannic clades), but their phylogenetic inter-relationships were generally weakly supported. Poorly resolved relationships in the Savannic clade suggests a rapid diversification in the campos rupestres vegetation, which accounts for the greatest species richness in the group. The presence of multiple Didymopanax lineages in the Amazonian and Atlantic forests corroborates that these regions may be composite biogeographic areas.

Genome size in plants varies greatly; in angiosperms this variability can make a 2400- fold difference. This is why the subject of many studies is the attempt to explain these differences in various contexts. One of these is the phylogenetic viewpoint, which studies the relationships between genome size and different taxonomic groups. Many studies have been published so far which explore the plants of the temperate zone; there are however very few studies investigating genome size in tropical plants. For this reason, the subject of this thesis is the analysis of genome size in the pantropical family Costaceae Nakai. This family presently includes seven genera: Monocostus K.Schum., Dimerocostus Kuntze, Costus L., Paracostus C.D.Specht, Chamaecostus C.D.Specht & D.W.Stev, Hellenia Retz. and Tapeinochilos Miq., counting altogether about 300 species. The family is sister to the family Zingiberaceae, which has been notably better explored due to its economic importance. One of the aims of this thesis was a partial revision of the phylogeny published by Specht (2006). Molecular methods were used to analyse the phylogenetic relationships; these methods included classical sequencing of the trnL-F region and next-generation sequencing, where probes designed in advance were used to obtain the targeted genes....