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Geomycology : fungal bioweathering, bioleaching, bioprecipitation and biotransformation of metals and mineralsLiang, Xinjin January 2015 (has links)
Fungi play important geoactive roles in the biosphere, particularly element biotransformations and biogeochemical cycling, metal and mineral transformations, decomposition, bioweathering, and soil and sediment formation. Fungi can apply various mechanisms to effect changes in metal speciation, toxicity and mobility, mineral formation and/or mineral dissolution. This research has examined fungal roles in bioweathering and bioleaching of zinc sulfide ore, together with an investigation of the role of fungal phosphatases in the bioprecipitation of uranium and lead when utilising an organic phosphorus-containing substrate as the sole phosphorus source. The results obtained revealed that test fungal species showed bioweathering effects on zinc sulfide ore, and clear evidence of biotransformation and bioleaching of zinc sulfide was obtained after growth of A. niger. The formation of zinc oxalate dihydrate resulted from oxalic acid excretion. The formation of uranium- and lead-containing biominerals after growth of yeasts and filamentous fungi with organic phosphorus sources have also been demonstrated and characterized. Test fungi were capable of precipitating uranium phosphate and pyromorphite, and also produced mycogenic lead oxalate during this process. This work is the first demonstration that filamentous fungi are capable of precipitating a variety of uranium- and lead-containing phosphate biominerals when grown with an organic phosphorus source. The role of fungal processes in the bioweathing and bioleaching of mineral ores, and the significance of phosphatases in the formation of uranium and lead secondary minerals has thrown further light on potential fungal roles in metal and mineral biogeochemistry as well as the possible significance of these mechanisms for element biorecovery or bioremediation.
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Getting out of the water and into the air: Understanding aerosolization of the bacterium Pseudomonas syringae from aquatic environmentsPietsch, Renee 04 May 2016 (has links)
Aquatic environments contain a great diversity of microorganisms, some of which may be aerosolized and transported long distances through the atmosphere. The bacterium Pseudomonas syringae can be found in aquatic environments and in the atmosphere and may express an ice nucleation protein (bacteria expressing the protein are Ice+ and bacteria not expressing the protein are Ice-). Ice+ bacteria may be involved in cloud formation and precipitation processes due to their ability to freeze water at warmer temperatures. Freshwater aerosolization processes are not well understood, particularly the role the Ice+ phenotype may play. Water samples were collected from Claytor Lake, Virginia, USA and screened for Ice+ P. syringae. Results indicated that between 6% and 15% of Pseudomonas colonies assayed were Ice+. Preliminary phylogenetic analysis of cts (citrate synthase) sequences from strains of P. syringae showed a surprising diversity of phylogenetic subgroups present in the lake. A Collison nebulizer was used to aerosolize an Ice+ and an Ice- strain of P. syringae under artificial laboratory conditions. The aerosolization of P. syringae was not influenced by water temperature between 5° and 30°C. In general, the culturability (viability) of P. syringae in aerosols increased with temperature between 5 and 30°C. The Ice+ strain was aerosolized in greater numbers than the Ice- strain at all temperatures studied, suggesting a possible connection between the Ice+ phenotype and aerosol production. A quantitative empirical assessment of aerosolized droplets was generated using a laboratory flume and high-speed video. Droplet diameter and initial velocity upon leaving the water surface were examined at four wind speeds (3.5, 4.0, 4.5, and 5.0 m/s), and the results showed that droplet diameter and velocity had a gamma distribution and droplet mass flux increased exponentially with wind speed. An estimate of the potential amount of bacteria capable of aerosolizing was made for each wind speed. An interdisciplinary unit for advanced high school students has been developed presenting biological aerosolization and ice nucleation. This interdisciplinary work combines modeling and experimental approaches across biology and engineering interfaces, with the goal of increasing our understanding of microbial aerosols from aquatic environments that may impact our planet's water cycle. / Ph. D.
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