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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Ageing by passive aggregation and stochastic distribution of protein aggregates

Coelho, Miguel 07 March 2012 (has links) (PDF)
In this work we report a new mechanism for ageing, where passive aggregation and stochastic segregation of protein aggregates can switch cells from a non-ageing to an ageing state. This switch is activated by the increase in the total amount of protein aggregates. We established a damage reporter system by labeling Hsp104, a chaperone which binds protein aggregates, with GFP. By observing that the accumulation of Hsp104 labeled aggregates correlated with the majority of cell death in the population, and that cells which are born with a high level of aggregates are more likely to die, we validated protein aggregation as being an ageing factor in S. pombe. To identify the mechanism of damage segregation, we monitored nucleation, fusion and partition of aggregates at division. We established that aggregates are present in the cytoplasm fraction which is not occupied by vacuoles and lipid vesicles, and that they are not actively transported by the cytoskeleton. Protein aggregates were not distributed in a biased manner at division. Their position in the cytoplasm dictates to which cell they will be partitioned at division, as confirmed by studies using an asymmetrically dividing mutant, pom1Δ, in which the larger cells inherited more aggregates. This shows that aggregate segregation in S.pombe is a stochastic process. Stochastic distribution contributes to a constant dilution of damage and the maintenance of a non-ageing division, where the total levels of damage in the individuals are on average maintained constant. Together with Steven Lade and Thilo Gross, from the MPI-PKS, we designed a model in which passive aggregation and stochastic segregation reproduced our experimental results. Surprisingly, when cells are exposed to heat stress and the total levels of protein aggregates increase, aggregates are unequally segregated, i.e., ageing is turned on. The switch in segregation results from increased fusion due to a higher number of aggregates, which generates large single aggregates, which are retained by one of the cells at division. Our model reproduced the heat stress condition, showing that fusion is an essential parameter to generate clean cells quickly after the levels of damage increase. Fission yeast cells can therefore switch between non-ageing and ageing like division depending on the total amount of damage at birth. To clarify if other cellular components could be ageing factors in S. pombe, we tested if the inheritance of the old cell wall at the cell pole was associated with an increase in division time, similarly to what occurs in E. coli. We also tested if the inheritance of the new centrosome-analog, the SPB, which is segregated to the ageing mother cell in S. cerevisiae, resulted in an increase in division time. We did not find evidence for ageing associated with these structures. Finally we determined that the feature of slow division was not a transmissible trait, i.e., daughters of slow diving cells divided faster than their mothers. Another ageing hallmark, the cumulative increase in division time with the total number of divisions before death, was not present in S.pombe. Our combined results from damage segregation and pedigree analysis show that stochastic segregation of damage is a viable strategy to avoid ageing. Passive aggregation in the presence of a high number of aggregates can switch on ageing, representing an alternative to active segregation mechanisms and to the existence of pre-defined ageing lineages, as shown for other organisms. Finally, our results show that ageing is not ubiquous to life, and that it can be a facultative strategy to cope with stress.
2

Ageing by passive aggregation and stochastic distribution of protein aggregates

Coelho, Miguel 01 February 2012 (has links)
In this work we report a new mechanism for ageing, where passive aggregation and stochastic segregation of protein aggregates can switch cells from a non-ageing to an ageing state. This switch is activated by the increase in the total amount of protein aggregates. We established a damage reporter system by labeling Hsp104, a chaperone which binds protein aggregates, with GFP. By observing that the accumulation of Hsp104 labeled aggregates correlated with the majority of cell death in the population, and that cells which are born with a high level of aggregates are more likely to die, we validated protein aggregation as being an ageing factor in S. pombe. To identify the mechanism of damage segregation, we monitored nucleation, fusion and partition of aggregates at division. We established that aggregates are present in the cytoplasm fraction which is not occupied by vacuoles and lipid vesicles, and that they are not actively transported by the cytoskeleton. Protein aggregates were not distributed in a biased manner at division. Their position in the cytoplasm dictates to which cell they will be partitioned at division, as confirmed by studies using an asymmetrically dividing mutant, pom1Δ, in which the larger cells inherited more aggregates. This shows that aggregate segregation in S.pombe is a stochastic process. Stochastic distribution contributes to a constant dilution of damage and the maintenance of a non-ageing division, where the total levels of damage in the individuals are on average maintained constant. Together with Steven Lade and Thilo Gross, from the MPI-PKS, we designed a model in which passive aggregation and stochastic segregation reproduced our experimental results. Surprisingly, when cells are exposed to heat stress and the total levels of protein aggregates increase, aggregates are unequally segregated, i.e., ageing is turned on. The switch in segregation results from increased fusion due to a higher number of aggregates, which generates large single aggregates, which are retained by one of the cells at division. Our model reproduced the heat stress condition, showing that fusion is an essential parameter to generate clean cells quickly after the levels of damage increase. Fission yeast cells can therefore switch between non-ageing and ageing like division depending on the total amount of damage at birth. To clarify if other cellular components could be ageing factors in S. pombe, we tested if the inheritance of the old cell wall at the cell pole was associated with an increase in division time, similarly to what occurs in E. coli. We also tested if the inheritance of the new centrosome-analog, the SPB, which is segregated to the ageing mother cell in S. cerevisiae, resulted in an increase in division time. We did not find evidence for ageing associated with these structures. Finally we determined that the feature of slow division was not a transmissible trait, i.e., daughters of slow diving cells divided faster than their mothers. Another ageing hallmark, the cumulative increase in division time with the total number of divisions before death, was not present in S.pombe. Our combined results from damage segregation and pedigree analysis show that stochastic segregation of damage is a viable strategy to avoid ageing. Passive aggregation in the presence of a high number of aggregates can switch on ageing, representing an alternative to active segregation mechanisms and to the existence of pre-defined ageing lineages, as shown for other organisms. Finally, our results show that ageing is not ubiquous to life, and that it can be a facultative strategy to cope with stress.

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