Please read the abstract in the section 00front of this document / Dissertation (MSc (Genetics))--University of Pretoria, 2007. / Genetics / unrestricted

The ability of corals to build reefs can be attributed to their relationship with single-celled algae of the familySymbiodiniaceae.Through the process of photosynthesis, these algae can provide their coral hosts with over 90% of their daily energy requirements. Most coral species acquire multiple species of symbionts from the surrounding water during their larval stage or immediately after settling. However, over time, the coral will select a dominant symbiont speciesthat can depend on the local environment. Until this study, the size or age of the coral at which this transition from multiple Symbiodiniaceaespecies to one dominant species occurs has remained uncertain. Likewise, it was unclear whether the selection of Symbiodiniaceaespeciesis influenced by the environment. The environmental conditions and symbiont composition of one hundred and eighteen juvenile Siderastrea siderea were assessed across four sites in Broward County, Florida. Presuming newly settled corals acquire multiple symbionts and then select just one dominant species, it was determined that the transition from multiple symbiont speciesto one dominant species in Siderastrea sidereaoccurs in the single polyp stage, between the time of settlement and approximately 4 to 6 months of age. The results also suggest that the selection of these dominant symbiont speciesis influenced by the environment, and that juveniles commonly select the same species as adults inhabiting similar environmental conditions. The selection of symbionts homologous to adult corals combined with environmental influences may be an early indicator of acclimatization in Siderastrea siderea.

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Pastoralism on the Mongolian steppe encompasses limited physical resources and evolving anthropogenic influences. Little-studied, the Inner Asian region encounters changing climates, evolving land use practices, and socio-economic transition that impact the natural and human geography. This thesis investigates how bio-physical factors and herder action determine the pastoral environment in the Gobi Desert, Mongolia. Research, focusing on drought, degradation and the extreme winter conditions that define pastoralism in Mongolia, examines pastoralists' perception of and interaction with their environment. This approach highlights steppe ecological and social processes within the global dryland debate. Fieldwork in Omnogovi and Ovorhangai Province established that drought is endemic in the region. However, drought events were independent of extreme winter conditions and did not exacerbate their impact. Degradation was not found at water points as vegetation cover decreased with distance from water. While remote sensing showed a decline in vegetation cover over time, it did not establish desertification on the steppe. Changing physical, socio-economic, and political conditions since 1990 continue to impact Mongolian pastoralism. Environmental conditions, particularly water resources and pasture quality, were paramount herder concerns. This research showed that pastoralists are economically motivated, differentiate on multiple dimensions, and value communal land stewardship. On the steppe, traditional mobile livestock practices improve livelihoods and remain an effective management approach. However, the future of pastoralism is uncertain as herders settle, the population ages, and children become educated. Thesis results emphasize the interaction of physical and social environments will define pastoralism's role in the Gobi Desert

Modem measurement methods ofthe surface turbulent fluxes (STF) of heat, moisture and momentum in the near surface atmospheric layer by the eddy correlation method and their calculation, relay on the validity of the similarity theory of Monin-Obukhov, which requests stationarity and horizontal homogeneity. Experimental data taken at specially selected sites allowed to develop this concept. Recently performed experiments, purposely conducted in non-ideal conditions showed an underestimation ofthe STF values. To systematise this effect it is suggested to parameterize such underestimation as the influence of inhomogeneity and nonstationarity of the landscape and the atmosphere around the point of observation. This scheme might prove to be useful for the design of new validation experiments in non-ideal terrain. / Modeme Meßmethoden zur Erfassung der turbulenten Oberflächenflüsse für fühlbare und latente Wärme sowie Impuls mit Hilfe der Eddy-Korrelations-Methode basieren für die bodennahe Grenzschicht auf der Monin-Obukhov-Turbulenztheorie, die stationäre und horizontal homogene Verhältnisse voraussetzt. Über speziell ausgewählten Oberflächen wurde dieses Konzept häufig mit Erfolg überprüft. Experimente jedoch, die gezielt unter inhomogenen Verhältnissen durchgeführt werden, zeigen oft eine Unterschätzung der turbulenten Oberflächenflüsse. Es wird vorgeschlagen, diese Unterschätzungen als einen Einfluß inhomogener Umbegungsbedingungen und instationärer atmosphärischer Prozesse zu interpretieren und zu systematisieren. Dieses Schema kann dazu beitragen, eine neue Art von Validierungsexperimenten unter natürlichen Verhältnissen einer inhomogenen Umgebung zu entwerfen.

Over drainage due to water management practices, abundance of native and rare species, and low-lying topography makes the coastal Everglades especially vulnerable to Sea-Level Rise (SLR). Water depths have shown to have a significant relationship to vegetation community composition and organization while also playing a crucial role in vegetation health throughout the Everglades. Modeling potential habitat change and loss caused by increased water depths due to SLR requires better vertical Root Mean Square Error (RMSE) and resolution Digital Elevation Models (DEMs) and Water Table Elevation Models (WTEMs). In this study, an object-based machine learning approach was developed to correct LiDAR elevation data by integrating LiDAR point data, aerial imagery, Real Time Kinematic (RTK)-Global Positioning Systems (GPS) and total station survey data. Four machine learning modeling techniques were compared with the commonly used bias-corrected technique, including Random Forest (RF), Support Vector Machine (SVM), k-Nearest Neighbor (k-NN), and Artificial Neural Network (ANN). The k-NN and RF models produced the best predictions for the Nine Mile and Flamingo study areas (RMSE = 0.08 m and 0.10 m, respectively). This study also examined four interpolation-based methods along with the RF, SVM and k-NN machine learning techniques for generating WTEMs. The RF models achieved the best results for the dry season (RMSE = 0.06 m) and the wet season (RMSE = 0.07 m) WTEMs. Previous research in Water Depth Model (WDM) generation in the Everglades focused on a conventional-based approach where a DEM is subtracted from a WTEM. This study extends the conventional-based WDM approach to a rigorous-based WDM technique where Monte Carlo simulation is used to propagate probability distributions through the proposed SLR depth model using uncertainties in the RF-based LiDAR DEM and WTEMs, vertical datums and transformations, regional SLR and soil accretion rates. It is concluded that a more rigorous-based WDM technique increases the integrity of derived products used to support and guide coastal restoration managers and planners concerned with habitat change under the challenge of SLR. Future research will be dedicated to the extension of this technique to model both increased water depths and saltwater intrusion due to SLR (saltwater inundation). / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2018. / FAU Electronic Theses and Dissertations Collection

The hydrological and topographical variation of wetlands can affect the behavior, population growth, and local densities of aquatic species, which in turn can drive the behavior and density dynamics of gleaning predators. Prey availability, primarily determined by prey density and water depth in wetlands, is an important limiting factor for nesting wading bird populations, top predators in the south Florida Everglades. The Everglades is able to support large colonies of nesting wading birds because of the microtopographic variation in the landscape. Some types of prey concentrate in flat, shallow sloughs or become trapped in isolated pools as they move down from higher elevation ridges with receding water levels. Manipulations to the hydrology and landscape of the Everglades has negatively impacted nesting wading bird populations in the past, and may continue to be detrimental by allowing flat, shallow sloughs to be intersected by deep canals, a potential refuge for wading bird prey. In addition, the subtle elevation differences between the ridge and slough landscape may be an important mechanism for increasing slough crayfish (Procambarus fallax) prey availability for the most abundant and seemingly depth-sensitive Everglades wading bird, the White Ibis (Eudocimus albus). I implemented a 2-year experimental study in four replicated manmade wetlands with controlled water recession rates in order to determine the effects of proximate deep water (akin to canals) on fish prey concentrations in the sloughs, as water levels receded similarly to a natural Everglades dry season. I also calculated average daily wading bird densities with game cameras (Reconyx PC800 Hyperfire) using timelapse imagery over 60 days to determine when and where wading birds responded to changing prey concentrations. I completed an additional observational study on White Ibis and slough crayfish prey from the first year of data (2017). Crayfish make up the majority of the diet for nesting White Ibis, and literature has suggested crayfish are most abundant at slough depths much deeper than previously proposed foraging depth limitations for White Ibis. This study specifically compared recent determinations about crayfish movement dynamics in the ridge and slough system with White Ibis foraging behavior and depth limits. Results from the first experimental study suggest that canals might be an attractive refuge for relatively large prey fishes (> 3 cm SL) in sloughs, but it is uncertain if the fencing blocked all prey fish movement. The second observational study determined White Ibis foraging activity was primarily driven by a down-gradient crayfish flux from ridge to slough, with the majority of foraging activity occurring at much deeper slough depths than previously suggested water depth limitations for White Ibis. Results from both of these studies support the importance of preserving the ridgeslough landscape of the Everglades to sustain high prey availability for wading birds. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2018. / FAU Electronic Theses and Dissertations Collection

The purpose of this thesis is to investigate associations between parasite infection and host life-history variation in the wild Soay sheep population of the islands of St Kilda, NW Scotland. Studying host-parasite interactions in wild animal populations is of interest because of the importance of heterogeneity in resource availability, genetics, and environmental conditions in determining resistance to parasites, with implications for human populations and wildlife conservation and management. However, very few studies are able to investigate these associations in a longitudinal manner, which is essential in order to understand how infection is associated with life-history variation across ages and environmental conditions. In this thesis, I investigate associations between parasite resistance and ageing and the importance of maternal effects on offspring parasite resistance. I also establish the shape of natural selection on parasite resistance, and associations between measures of parasite burden and antibody responses. The principle findings of the analyses presented in this thesis are: i) Adult sheep of both sexes show a decline in parasite resistance in old age which is consistent with senescence. Furthermore, the rate of decline in parasite resistance with age is accelerated in individuals that have experienced more stressful environmental conditions over their lifespan. ii) Aspects of maternal phenotype and lamb early life performance are significantly associated with parasite resistance in lambs. Some of these effects persist into adult life and may even affect late-life changes in parasite resistance with age. iii) Analysis of ageing in five female reproductive traits shows that the contributions of individual senescence, terminal effects, and selective disappearance vary across traits, and that therefore multiple traits should be studied in order to understand ageing more fully. Most strikingly, there was no evidence for significant senescence in the probability of producing twins. iv) The first estimate of the strength of natural selection on parasite resistance in a longitudinally-monitored population provided evidence for positive selection on parasite resistance in lambs but not adults. Selection in lambs also varied across environmental conditions, being stronger in years of more favourable conditions. v) Analysis of associations between estimates of parasite burden and antibody responses showed that an estimate of parasite burden was not correlated with either a general or parasite-specific antibody response. However, antibody responses were positively correlated, and there was some evidence for a genetic correlation between the two in lambs but not adults.