The technique of non-redundant masking (NRM) transforms a conventional telescope into an interferometric array. In practice, this provides a much better constrained point-spread function than a filled aperture and thus higher resolution than traditional imaging methods. Here, we describe an NRM data reduction pipeline. We discuss strategies for NRM observations regarding dithering patterns and calibrator selection. We describe relevant image calibrations and use example Large Binocular Telescope data sets to show their effects on the scatter in the Fourier measurements. We also describe the various ways to calculate Fourier quantities, and discuss different calibration strategies. We present the results of image reconstructions from simulated observations where we adjust prior images, weighting schemes, and error bar estimation. We compare two imaging algorithms and discuss implications for reconstructing images from real observations. Finally, we explore how the current state of the art compares to next-generation Extremely Large Telescopes.

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As computers have become more and more advanced, with even the most basic computer capable of tasks almost unimaginable only a decade ago, researchers and developers are focusing on improving the way that computers interact with people in their everyday lives. A core goal, therefore, is to develop a computer system which can understand and react appropriately to natural human behavior. A key requirement for such a system is the ability to automatically, and in real time, recognises human facial expressions. In addition, this must be successfully achieved regardless of the inherent differences in human faces or variations in lighting and other external conditions. The focus of this research was to develop such a system by evaluating and then utilizing the most appropriate of the many image processing techniques currently available, and, where appropriate, developing new methodologies and algorithms. The first key step in the system is to recognise a human face with acceptable levels of misses and false positives. This research analysed and evaluated a number of different face detection techniques, before developing a novel algorithm which combined phase congruency and template matching techniques. This novel algorithm provides key advantages over existing techniques because it can detect faces rotated to any angle, and it works in real time. Existing techniques could only recognise faces which were rotated less than 10 degrees (in either direction) and most could not work in real time due to excessive computational power requirements. The next step for the system is to enhance and extract the facial features. To successfully achieve the stated goal, the enhancement and extraction of the facial features must reduce the number of facial dimensions to ensure the system can operate in real time, as well as providing sufficient clear and detailed features to allow the facial expressions to be accurately recognised. This part of the system was successfully completed by developing a novel algorithm based on the existing Contrast Limited Adaptive Histogram Equalization technique which quickly and accurately represents facial features, and developing another novel algorithm which reduces the number of feature dimensions by combining radon transformation and fast Fourier transformation techniques, ensuring real time operation is possible. The final step for the system is to use the information provided by the first two steps to accurately recognise facial expressions. This is achieved using an SVM trained using a database including both real and computer generated facial images with various facial expressions. The system developed during this research can be utilised in a number of ways, and, most significantly, has the potential to revolutionise future interactions between humans and computers by assisting these reactions to become natural and intuitive. In addition, individual components of the system also have significant potential, with, for example, the algorithms which allow the recognition of an object regardless of its rotation under consideration as part of a project aiming to achieve non-invasive detection of early stage cancer cells.

Σκοπός της παρούσας Διπλωματικής Εργασίας είναι η ανάπτυξη και εφαρμογή τεχνικών ψηφιακής επεξεργασίας εικόνων για τον εντοπισμό του οφθαλμού και τον υπολογισμό συγκεκριμένων παραμέτρων που συνδέονται με την κατάσταση του χρήστη. Συγκεκριμένα, χρησιμοποιήθηκε ένα ολοκληρωμένο Σύστημα Εντοπισμού Οφθαλμού που περιλαμβάνει τα υποσυστήματα της CMOS κάμερα, της μεταφοράς δεδομένων – εικόνων, της ψηφιοποίησης των δεδομένων, και τέλος το υποσύστημα της επεξεργασίας εικόνων οφθαλμού και του υπολογισμού παραμέτρων. Στα πλαίσια του τελευταίου αυτού υποσυστήματος αναπτύχθηκαν δύο μεθοδολογίες που βασίστηκαν στην εφαρμογή αλγορίθμων ψηφιακής επεξεργασίας εικόνων. Η πρώτη μεθοδολογία βασίστηκε στον υπολογισμό της μέσης φωτεινότητας για την άνω και την κάτω περιοχή του οφθαλμού. Η χρονική μεταβολή των δύο τιμών της φωτεινότητας χρησιμοποιήθηκε για την εξαγωγή πληροφοριών για την κατάσταση του οφθαλμού (ανοιχτός ή κλειστός). Η δεύτερη μεθοδολογία στηρίχτηκε σε ένα συνδυασμό τεχνικών ψηφιακής επεξεργασίας εικόνων. Η επεξεργασία κάθε εικόνας της ακολουθίας video περιλαμβάνει τέσσερα βασικά βήματα: (α) ευθυγράμμιση της εικόνας σε σχέση με ένα κοινό σύστημα αναφοράς, (β) εφαρμογή δύο φίλτρων για την ανίχνευση των κορυφών και των κοιλάδων της εικόνας, (γ) σύντηξη των δύο φιλτραρισμένων εικόνων που προκύπτουν και (δ) μετατροπή της εικόνας σύντηξης σε δυαδική με εφαρμογή κατάλληλου κατωφλίου. Η καταμέτρηση των λευκών εικονοστοιχείων της δυαδικής εικόνας στην περιοχή του οφθαλμού καθορίζει την κατάσταση του οφθαλμού (ανοικτός ή κλειστός). Τέλος, και μέσω του λογισμικού, υπολογίζονται οι σχετικές παράμετροι της κατάστασης του οφθαλμού όπως ο αριθμός ανοιγο-κλεισίματος οφθαλμού, η διάρκεια κάθε ανοιγο-κλεισίματος οφθαλμού και οι χρονικές αποστάσεις μεταξύ των προσδιορισμένων ανοιγο-κλεισιμάτων σε μια αλληλουχία συλλεγμένων εικόνων. / The scope of the thesis was the development and application of digital image processing techniques in order to detect human eye in video sequences and determine parameters related to the user’s state. Specifically, an integrated Eye-Tracking System was used in order to obtain the necessary image frames for further processing. The System consists of four modules, the CMOS camera module, the transfer module, the digitization module and the software module. The software module was based on the application of image processing techniques to detect the eye and calculate specific parameters. Two image processing techniques were developed and tested throughout this thesis. The first method was based on the calculations of the mean brightness of the upper and lower eye region for each frame of the video sequence. The temporal variation of this mean value provided useful information for the eye state (open/closed). The second method was based on a combination of various image processing techniques. The processing of each video frame comprises of four basic steps: a) registration of the image in relation to the first frame of the video sequence, b) filtering in order to detect the peaks and valleys of the image being processed, c) fusion of the filtered images, and d) binarization of the fused image by thresholding. The calculation of the number of white pixels in the eye region of the binary image indicates the state of the eye (open/closed) and allows the determination of the blink parameters related to the user’s state (vigilance/somnolence). The parameters being measured throughout this thesis were the number of eye blinks, the blink duration and the blink interval.

Indiana University-Purdue University Indianapolis (IUPUI) / Understanding the mechanical properties of peripheral nerves is essential for chronically implanted device design. The work in this thesis aimed to understand the relationship between local deformation responses to global strain changes in peripheral nerves. A custom-built mechanical testing rig and sample holder enabled an improved cyclical uniaxial tensile testing environment on rabbit sciatic nerves (N=5). A speckle was placed on the surface of the nerve and recorded with a microscope camera to track local deformations. The development of a semi-automated digital image processing algorithm systematically measured local speckle dimension and nerve diameter changes. Combined with the measured force response, local and global strain values constructed a stress-strain relationship and corresponding elastic modulus. Preliminary exploration of models such as Fung and 2-Term Mooney-Rivlin confirmed the hyperelastic nature of the nerve. The results of strain analysis show that, on average, local strain levels were approximately five times smaller than globally measured strains; however, the relationship was dependent on global strain magnitude. Elastic modulus values corresponding to ~9% global strains were 2.070 ± 1.020 MPa globally and 10.15 ± 4 MPa locally. Elastic modulus values corresponding to ~6% global strains were 0.173 ± 0.091 MPa globally and 1.030 ± 0.532 MPa locally.

Ce manuscrit de thèse présente l’étude des techniques de super-résolution latérale en nanoscopie optique, qui est une des nouvelles techniques d'imagerie haute résolution, aujourd'hui largement utilisée en biophysique et en imagerie médicale, pour imager et caractériser des nanostructures, tout en conservant les avantages de l'imagerie optique en champ lointain comme un vaste champ, la visualisation et l’analyse en temps réel…Un des défis futurs de la microscopie 3D super-résolue est d’éviter l’utilisation des marqueurs fluorescents. La microscopie interférométrique fait partie des techniques d’imagerie 3D sans marquage permettant la détection de nanostructures. Pour améliorer le pouvoir de détection de ce système optique, un premier protocole de traitement d’images a été développé et implémenté, permettant ainsi de révéler des structures initialement non mesurables. Puis, pour améliorer la résolution latérale du système, une nouvelle technique combinant l’interférométrie et le principe du nano-jet photonique a été développée permettant l’observation d’objets de taille inférieure à la limite de diffraction de l’instrument optique. / This manuscript presents the study of the lateral super-resolution techniques in optical nanoscopy, which is a new high-resolution imaging method now widely used in biophysics and medical imaging, to observe and measure nanostructures, with the advantages of far field optical imaging, such as a large field of view, visualization and analysis in real time…One of the future challenges of 3D super resolution microscopy is to avoid the use of fluorescent markers. Interferometric microscopy is a 3D label-free imaging technique enabling the detection of nanostructures. To improve the detection capability of this optical system, a first version of a protocol composed of image processing methods was developed and implemented, revealing structures initially unmeasurable. Then, to improve the lateral resolution of the system, a new technique combining interferometry and the principle of the photonic nano-jet has been developed, thus allowing the observation of objects of a size smaller than the diffraction limit of the optical instrument.