Submitted by Marlene Santos (marlene.bc.ufg@gmail.com) on 2014-10-01T15:50:01Z No. of bitstreams: 2 Tese - Allan Valle Toledo da Silveira - 2013.pdf: 1647435 bytes, checksum: 49a815f9117230a88dd9f9443c919f33 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) / Approved for entry into archive by Jaqueline Silva (jtas29@gmail.com) on 2014-10-01T16:46:58Z (GMT) No. of bitstreams: 2 Tese - Allan Valle Toledo da Silveira - 2013.pdf: 1647435 bytes, checksum: 49a815f9117230a88dd9f9443c919f33 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) / Made available in DSpace on 2014-10-01T16:46:58Z (GMT). No. of bitstreams: 2 Tese - Allan Valle Toledo da Silveira - 2013.pdf: 1647435 bytes, checksum: 49a815f9117230a88dd9f9443c919f33 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Previous issue date: 2013-04-05 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / This thesis evaluated the variables that influence the distribution of aquatic insects, along different spatial scales, aiming to establish a biologic index of water quality based on these organisms. The study area was the Rio dos Bois watershed, one of the most important from Goiás State, due to its vocation for agricultural and cattle production. Thus, the community of aquatic insects occurring in forty two streams was sampled, as well as a series of water physicochemical variables. Surrounding the streams (up to a distance of 200 m), and along the watershed above the sampling units, percentages of land use (agriculture, pasture and native vegetation) were estimated based on LandSat 5/TM satellite images from July 2012. The main results showed that (1) smaller spatial scales seem to provide better estimates of water quality and aquatic insects community than the watershed level scale, being recommended to use habitat integrity indexes (HII); (2) the variance partition held to define the contribution of the spatial processes and environmental variables on the community structure of aquatic insects did not present statistically significant values to corroborate none of the two sets of predictors and (3) only four from the 26 biodiversity metrics studied were enough to compose a multimetric index for the watershed, (% Plecoptera, Ephemeroptera richness, EPT richness and the BMWP/ASPT index). (4) Based on this index, it was possible to classify the streams from the study area as very disturbed (41%), with intermediate impacts (46%) and minimally disturbed (13%). This study may contribute to future studies of biomonitoring and conservation of water resources in the Goiás State and Brazil. / escalas espaciais, na tentativa de estabelecer um índice biológico de qualidade de água baseado nesses organismos. A área de estudo adotada foi a Bacia Hidrográfica do Rio dos Bois, uma das mais importantes do estado de Goiás, devido a sua vocação agropecuária. Desta forma, a comunidade de insetos aquáticos pertencentes a quarenta e dois córregos foi amostrada, bem como uma série de variáveis físico químicas da água . Nos arredores dos córregos (até 200 m de distância), bem como em toda a bacia à montante do local amostrado, porcentagens de classes de uso de solo (agricultura, pecuária e vegetação) foram estimadas a partir de imagens de satélite LandSat 5/TM datadas de julho de 2012. Os principais resultados evidenciam que (1) escalas espaciais menores parecem ser melhores preditores da qualidade da água e das comunidades de insetos aquáticos do que a escala ao nível de bacia, sendo recomendada a utilização de índices de integridade ambiental (IIA); (2) a partição de variância realizada para determinar as contribuições dos processos espaciais e variáveis ambientais na estruturação da comunidade de insetos aquáticos não apresentou valores estatisticamente significativos para corroborar nenhum dos dois conjuntos de preditores e (3) apenas quatro de 26 métricas de biodiversidade estudadas foram satisfatórias para compor um índice multimétrico para a bacia, (% Plecoptera, riqueza de Ephemeroptera, riqueza de EPT e o índice BMWP/ASPT). (4) Baseado neste índice, pôde-se classificar os córregos da área estudada como: muito impactadas (41%), com impactos intermediários (46%) e minimamente impactadas (13%). Acredita-se que este estudo possa contribuir para futuros estudos de biomonitoramento e conservação de recursos hídricos no estado de Goiás e no Brasil.

Taxonomic composition and spatio-temporal variability of macroinvertebrates inhabiting snags were examined from an 8-km segment of the Elm Fork of the Trinity River. Seventy-seven macroinvertebrate taxa were collected from submerged wood during the study. Assemblages were highly variable spatially and temporally, especially among seasons. An ordination of species and environment did not find snag taxa to have striking correlations with many of the selected environmental variables, although there were some trends in flow-mediated species distributions. There were significant seasonal differences in the abundances of some taxa, particularly among the Chironomidae (Diptera). The Tribe Orthocladiini was numerically abundant during the winter, while the Tribes Chironomini and Tanytarsini dominated the summer and autumn. Additionally, this study included a secondary production and microdistribution analysis of a population of the caddisfly Cyrnellus fraternus. Distributions of C. fraternus were restricted to snags, the most stable substratum for retreat building and for resisting periodic high waters. Larvae were not found in the soft sand and mud benthic habitats near submerged wood. The insects were multivoltine with a minimum of three generations per year. Pupae were collected July through September and adults emerged from May through October. The population overwintered as larvae. Estimated annual production was 1,015.4 mg/m2/yr. Mean standing stock biomass was 61.24 mg/m2, the cohort production/biomass ratio was 4.59, and the annual production/biomass rate was 16.58/yr for this population. Standing stock biomass ranged from 1.6 to 349.1 mg/m2 during the year and was significantly higher in autumn and summer than winter. Larvae were more abundant in the lower portions of the study area where flow was reduced for much of the year, than in the upper reaches, characterized by higher current velocities. C. fraternus larvae were found in their highest numbers on snags with dense deposits of silt and sand.

Appreciation of the ecological and economic values associated with healthy salt marshes has led to a recent rise in the number of marshes that are being targeted for restoration by dike removal. The success of restoration is often measured by the return of marsh plants, though this overlooks a key component of salt marshes, that of the invertebrate community within marsh sediments. To evaluate the short-term recovery of these invertebrates, sediment cores were collected across an elevational gradient in a recent dike removal marsh, one and two years post removal, and a nearby reference marsh. Abundance, richness and diversity as well as morphospecies community composition were compared across treatment groups (Reference, Removal) and elevation zone (High Marsh, Low Marsh). Morphospecies richness, abundance and diversity were significantly higher in Low Marsh samples than in High Marsh samples, though no statistically significant differences were found across treatments of the same elevation (e.g., Reference Low Marsh versus Removal Low Marsh). Pair-wise ANOSIM results found significant differences between community compositions across treatments, specifically Reference Low Marsh and Removal Low Marsh. The marsh edge, the lowest point of vascular plant growth before transitioning to tide flats, is considered a high stress environment for emergent vegetation. Plant establishment and survival in this low elevation zone is limited by the tolerance to inundation duration and frequency and anoxic sediments. Bioturbation and burrowing by macroinvertebrates increases the surface area exposed to surface water for gas exchange, increasing the depth of the redox potential discontinuity layer. Crabs that make stable, maintained burrows have been shown to increase oxygen penetration into sediment, improving plant productivity. Such crabs are not found in salt marshes of the Pacific Northwest of North America. However, other burrowing invertebrates may have a positive impact on plant health in these areas by reducing abiotic stress due to anoxic sediments, thereby allowing plants to establish and survive lower in the intertidal zone. To assess this potential relationship, study plots of Distichlis spicata were selected at equivalent elevations at the lowest point of plant establishment at the marsh edge. Focal plant rhizomes were severed from upland ramets and assigned an invertebrate abundance treatment based on a visual burrow count surrounding each plant (9 cm diameter). Focal plants were visited monthly from July to September 2016, plant health variables of chlorophyll content and chlorophyll fluorescence (photosynthetic efficiency), and sediment ORP readings were collected. Plant survivorship was significantly higher in plots with invertebrates, 96% of plants in 'With Invertebrate' plots and 50% of plants in 'No Invertebrates' plots survived the duration of the study. Plant health (chlorophyll content and chlorophyll fluorescence) generally increased with increased invertebrate presence though, not statistically significant. There may be potential for improved plant productivity and resilience to plants at the marsh edge due to invertebrate burrowing activity. This benefit could help mitigate projected losses in plant productivity due to sea level rise, though more research is needed to investigate the mechanism by which these invertebrates confer a health benefit to plants at the marsh edge.

Abstract not available

Arid and semiarid river systems in Western Queensland, Australia, are characterized by the unpredictable and highly variable nature of their hydrological regimes as a result of the episodic nature of rain events in the region. These dryland rivers typically experience episodic floods and extremely low or no flow periods. During low or no flow periods, water persists only in relatively wide and deep sections of the river channels, which are called 'waterholes'. These isolated waterholes serve as refugia for aquatic species during protracted intervals between floods. In such discontinuous riverine habitat, dispersal of freshwater species may be achieved only during wet seasons, when water is flowing in rivers and the nearby floodplains. Obligate aquatic species occur in habitats that represent discrete sites surrounded by inhospitable terrestrial landscapes. Thus, movements are very much limited by the physical nature and arrangement of the riverine system. In addition, the distribution of a species may be also largely dependent on historical events. Landscape and river courses continually change over geological time, often leaving distinct phylogenetic 'signatures', useful in reconciling species' biology with population connectivity and earth history. The main aim of this study was to resolve the relative importance of contemporary and historical processes in structuring populations of two freshwater species in Western Queensland river systems. To address this aim, a comparative approach was taken in analysing patterns of genetic variation of two freshwater invertebrates: a snail (Notopala sublineata) and a prawn (Macrobrachium australiense). Mitochondrial sequences were used for both the species. In addition, allozyme and microsatellites markers were employed for N. sublineata. These species have similar distributions in Western Queensland region, although N. sublineata appears to be extinct in some catchments. M. australiense is thought to have good dispersal abilities due to a planktonic larval phase in its life cycle and good swimming capabilities, whereas N. sublineata is thought to have limited dispersal abilities, because of its benthic behaviour and because this species is viviparous. It was hypothesised that these freshwater invertebrates, would display high levels of genetic structure in populations, because physical barriers represented by terrestrial inhospitable habitat, are likely to impede gene flow between populations inhabiting isolated river pools. Genetic data for the two species targeted in this study supported this hypothesis, indicating strong population subdivision at all spatial scales investigated (i.e. between and within catchments). This suggests that contemporary dispersal between isolated waterholes is relatively restricted, despite the potential good dispersal abilities of one of the species. It was hypothesised that levels of gene flow between populations of aquatic species were higher during the Quaternary (likely movements of individuals across catchment boundaries) and that they have been isolated relatively recently. There is evidence that historically gene flow was occurring between populations, suggesting that episodic dispersal across catchment boundaries was likelier in the past. Episodic historical movements of aquatic fauna were facilitated by higher patterns of river connectivity as a result of the climate changes of the Pleistocene. Because the two species targeted in this study exhibit analogous spatial patterns of evolutionary subdivision it is likely that they have a shared biogeographic history. The unpredictable flow regime of rivers in Western Queensland is likely to have considerable effects on the genetic diversity of aquatic populations. First, if populations of obligate freshwater organisms inhabiting less persistent waterholes are more likely to experience periodic bottlenecks than those inhabiting more persistent ones, they would be expected to have lower levels of genetic diversity. Second, if populations inhabiting less persistent waterholes periodically undergo local extinction with subsequent recolonisation, there should be higher levels of genetic differentiation among them, due to the founder effects, than among those populations inhabiting more persistent waterholes. Contrary to the first prediction, the observed levels of genetic diversity in both N. sublineata and M. australiense were high in both more persistent and less persistent waterholes. There was no tendency for genetic diversity to be lower in less persistent than in more persistent waterholes. However, when Cooper waterholes were ranked in order of persistence, positive correlation between water persistence time in waterholes and genetic diversity was detected in N. sublineata but not in M. australiense. Contrary to the second prediction, highly significant genetic differentiation was found among populations from both less persistent and more persistent waterholes. This indicates that not only populations from less persistent but also those from more persistent waterholes were very dissimilar genetically. This study demonstrated the importance of both contemporary and historical processes in shaping the population structure of obligate freshwater species in Western Queensland river systems. It has indicated that contemporary movements of freshwater species generally are extremely limited across the region, whereas episodic dispersal across catchment boundaries was possible during the Pleistocene, due to different patterns of river connectivity.

Throughout the Pacific, many species of echinoderms and molluscs have cultural value and are harvested extensively in subsistence fisheries. Many of these species are sedentary and often associated with distinct reef-top habitats. Despite the significance of reef habitats and their fauna for fisheries and biodiversity etc, little information has been available on the distribution of habitats and their influence on the reef-top fauna in the Cook Islands. This thesis developed a novel approach to assess the status of the shallow-water reef-tops of Rarotonga, Cook Islands, to provide critical information to fisheries and conservation managers. The approach used remote sensing (aerial photography with ground truthing) to map the spatial arrangement and extent of the entire reef-top habitats accurately, and historical wind data and coastline shape to determine the windward and leeward sides of the island. The benthic habitat maps and degree of wind exposure were used to design and undertake a stratified sampling programme to assess the distribution and abundance of the epibenthic macroinvertebrate fauna of the reef-top. I quantified the distribution and abundance of the epibenthic macroinvertebrates and how they varied with habitat, assessed the effectiveness of a traditional ra�ui (marine protected area) for conserving stocks of Trochus niloticus and other invertebrates, and investigated the reproductive biology and impacts of traditional gonad harvesting on Holothuria leucospilota. There were four major habitat types (rubble/rock, sand/coral matrix, algal rim and sand) identified, the most extensive being rubble/rock (45%) and sand/coral matrix (35%). The degree of exposure to winds was found to correlate with the reef development and habitat distribution. The assemblage composition of each major habitat type differed significantly from every other habitat. The rubble/rock habitat had the greatest substratum heterogeneity and structural complexity, and the highest number of species and individuals. The overall abundance of the fauna was dominated by holothurians (68%) and echinoids (30%), while Trochus niloticus and Tridacna maxima accounted for the remaining 2% of the total invertebrate assemblage. Clear habitat partitioning was also found for adult and juvenile Trochus niloticus and Tridacna maxima. In the traditional fishery for Holothuria leucospilota, the mature gonads of males are harvested by making an incision in the body-wall of the animal, removing the gonads and then returning the animal to the reef to allow regeneration. Monthly collections of H. leucospilota were used to describe the reproductive biology of this species. Gametogenesis and spawning were synchronous between the sexes and spawning occurred annually during summer, when water temperature and photoperiod were at their highest. Although the incision in the body-wall and gonad removal had no impact on the survival of H.leucospilota in experimental cages, their body weight, and general sheltering and feeding behaviors were affected. Gonads took at least 41 days to start regenerating, suggesting a considerable delay in the spawning of fished individuals. In 1998, five Rarotongan communities re-introduced the traditional ra�ui system of resource management, prohibiting all fishing and gathering from their reefs. The performance of the Nikao ra�ui, which had been put in place to allow trochus stocks to increase, was investigated. Comparisons of macroinvertebrate assemblage composition and species density were made between three fishing treatments, i.e. fished areas adjacent to the ra�ui, within the ra�ui after two years of protection, and in the ra�ui after it had been lifted for three weeks to allow a commercial trochus harvest. Analysis of variance on the count data for the twelve most abundant species, and non-metric multi-dimensional scaling indicated that there were no differences in the microhabitat or the invertebrate assemblage composition between the three fishing treatments. However, there were significant differences between the rubble/rock and sand/coral matrix habitat types. The results on the effectiveness of the Nikao ra�ui are equivocal, due to the small sample size, and the variability between samples which was highlighted by the wide confidence intervals. This study highlights the importance of habitat to the macroinvertebrate fauna of the reef-top and the need for accurate habitat maps to increase the cost-effectiveness of future resource surveys, to provide information to management, and for the design of Marine Protected Areas. The mapping and survey methods must be reliable and repeatable in terms of the limitations of time, and the availability of expertise, funding and resources. The results provide important information for fisheries and conservation managers of Rarotonga and other Pacific Islands to better design rigorous sampling programmes for monitoring the status of reef-top resources, and for evaluating and planning Marine Protected Areas.

Invertebrate spatial patterns were investigated in 36 and 12 spring and runoff-fed streams in New Zealand and in Northern Spain, respectively. Moss biomass and resource levels were more abundant in springbrooks than in runoff-fed streams. Invertebrate densities were greater in spring habitats, but invertebrate richness was higher and lower at more stable sites in New Zealand and Spain, respectively. These differences in invertebrate diversity may be related to the larger diversity of invertebrate predators in New Zealand springbrooks, and the lack of temperature mediated life history cues in the New Zealand invertebrate fauna. I carried out two experiments to look at the effect of local factors on the spatial distribution of invertebrate communities. The first experiment investigated the effect that algal biomass and habitat structure had on stream invertebrate communities. To do this I used artificial canopies to reduce algal growth and artificial substrates with different habitat complexities. Numbers of invertebrate taxa and individuals were both lower on bricks under the artificial canopies and on the simplest substrates. Algal productivity may enhance invertebrate richness by increasing the number of individuals in a given area, whereas habitat complexity may increase invertebrate richness by providing greater food and/or space resources. The second experiment examined the effects of primary productivity and physical disturbance on stream invertebrates by using artificial canopies and by kicking and raking patches of the stream bed (10 m2). We compared the effects of natural versus experimental disturbance on the benthic invertebrate fauna Invertebrate fauna in high productivity patches recovered quicker than in low productivity patches after both experimental and natural disturbance. The experimental disturbance reduced number of invertebrate taxa and individuals to a greater extent than the spate. Primary productivity limited the recovery of the invertebrate fauna after the disturbances. I also investigated temperature patterns in five runoff and seven spring-fed streams in the North and South Islands of New Zealand. The invertebrate fauna was sampled at 4 distances (0, 100, 500 and 1 km) from seven spring sources. Temperature variability was much larger for runoff-fed streams than for springs, and it increased with distance from the source. Flow, altitude, and the number and type (i.e., spring or runoff-fed) of tributaries joining the springbrook channel determined the degree of temperature variability downstream of the spring sources. Moving downstream, invertebrate communities progressively incorporated taxa with higher mobility and those more common to runoff-fed streams. Changes in substrate composition, stability and invertebrate drift are more likely explanations of the observed longitudinal patterns in the invertebrate communities than changes in temperature regimes.

The deep ocean (> 200-m depth) covers more than 65 percent of earth's surface and is known as the largest active carbon sink of the planet. Photosynthesis fixes inorganic carbon into organic rich-compounds to fuel the biological production in the upper ocean. A small portion of the photosynthetic carbon eventually sinks to the seafloor to support diverse deep-sea life. In this dissertation, the phytoplankton production and export flux of particulate organic carbon (POC) to the seafloor were linked to standing stocks and compositional changes of the deep-sea soft bottom assemblages. The pattern and processes of energy transfer from the surface ocean to the deep sea was examined by modeling the global benthic bacteria, meiofauna, macrofauna, and megafauna biomass from remotely sensed ocean color images and the seafloor relief. The analysis was then scaled down to the macrofauna of the Gulf of Mexico (GoM) to examine the global pattern on regional oceanic features with contrasting productivity regimes. These results suggested a universal decline of benthic standing stocks down the continental margins that is caused by an exponential decrease of export POC flux with depth. A revisit of historical epibenthic invertebrate sampling in the North Atlantic showed that both individual species and multi-species assemblages occurred in narrow depth bands that hugged the topography from the upper continental slope out to the Hatteras Abyssal Plain. The continuum compositional change suggested that the continuous decline of benthic food supply with depth was the potential driving force for the pattern of bathymetric faunal zonation. A broad, systematic survey across multiple depth transects in the northern GoM suggested that macrofauna zonation is not only taking place across isobaths, but also form the northeast to the northwest GoM due to a horizontal productivity gradient created by the nutrient-laden Mississippi River. Analyses of long-term demersal fish data from 1964 to 2002 in the northern GoM showed no evidence of large-scale faunal change across different sampling times. Base on the pooled data, a shift in rate of fish species replacement may be caused by complex biological interactions or changes in environmental heterogeneity along depth or productivity gradients.

Several hypotheses from community ecology were tested using habitat and diet patterns for six catostomid fishes of the Assiniboine River, Manitoba. Specifically, I examined expected assemblage patterns based on the equilibrium-nonequilibrium continuum that are based on competition as a structuring mechanism. The catostomid assemblage showed characteristics of both equilibrium and nonequilibrium assemblages. Habitat utilization was not proportional to habitat availability for depth, velocity, and substrate indicating habitat selection occurs. These patterns are influenced by the distributions of soft Lake Agassiz deposits and harder glacial till-plain habitats and therefore localized. Species co-occurred in relation to abundance indicating negative associations assumed in competition-based theory were not apparent. In addition, species from the same subfamily co-occurred more often than expected by chance, indicating positive within-group comparisons, except for silver redhorse, which did not co-occur differently than random. Species from the same feeding group co-occur most frequently with conspecifics, indicating species have specific habitat patterns. Benthic invertebrate distributions and fish distributions were positively correlated with fish diet. Within-feeding-group comparisons indicated species that co-occurred frequently consumed the same food items, but showed subtle differences in abundance of diet items. The most common diet items varied among white sucker, silver redhorse, golden redhorse, and shorthead redhorse, indicating that, although these species co-occur, subtle differences in feeding behavior may account for differences in relative abundance and frequency of diet items. Quillback and bigmouth buffalo shared a few core food items, but co-occurred infrequently. Inter-specific interactions showed silver redhorse diets were a subset of white sucker diets, white sucker diets were a subset of golden redhorse diets, shorthead redhorse diets were a subset of silver redhorse and golden redhorse diets, while bigmouth buffalo diets were a subset of quillback diets. Lower richness and prevalence of organisms in quillback and bigmouth buffalo diets were due to highly aggregated prey items. Benthic invertebrate distributions were aggregated and dependent on the predictable patterns of substrates, based on hydraulic sorting in the meandering along the river. Large-scale redundancy of species-habitat associations was correlated with historical (phylogenetic) or adaptive (morphological) constraints on habitat selection. Stream habitats are constrained by regional factors of slope and sediments, but also determined by stable, repetitive and predictable local processes of erosion, transport, and deposition (meandering). The fish-habitat associations of catostomids in the Assiniboine River provide an example of interaction between the abundance of the component species, the phylogenetic constraints on the niche, and the deterministic nature of the spatial distribution of habitats. Within-feeding-group pairs showed that local habitat overlap is positively correlated with geographic overlap, while local diet overlap is negatively correlated with geographic overlap. Two species pairs (silver redhorse and golden redhorse and bigmouth buffalo and quillback) were concluded to have symmetric overlaps at the geographic scale and stable interactions. Using the functional niche concept ecological theory provides a link between ecology and biogeography of sympatric species. The multi-analytical approaches in this study provide insights into the structuring of north temperate prairie river fish communities, through hypothesis testing and correlation that have application beyond Prairie Rivers. / October 2005

Gli ecosistemi acquatici sono il comparto ambientale finale per molti contaminanti introdotti nell’ambiente, specialmente per quelli persistenti, provenienti da diverse attività antropiche. Gli organismi acquatici sono esposti simultaneamente a differenti classi di composti chimici e, la loro fisiologia può esserne affetta anche da basse concentrazioni ambientali che ne determinano un effetto a cascata drammatico sull’intero ciclo vitale delle stesse. Per identificare gli effetti ecotossicologici si devono scegliere delle variabili di studio che sono sensibili a cambiamenti di esposizione e quindi possono registrare informazioni a differenti livelli di organizzazione biologica (ad es.: comunità, specie, alterazioni cellulari, molecolari). Il presente lavoro ha come scopo di studiare biomarker biochimici e bioindicatori su invertebrati acquatici capaci di rispondere all’effetto dei contaminanti e predirne il rischio di tossicità, requisito fondamentale dell’attuale legislazione comunitaria ambientale. Questo lavoro, nell’ambito della Water Frame Directive (WFD), affronta questa tematica con diversi tipi di approccio per implementare un sistema di monitorizzazione efficiente. Lo SPEAR ad esempio è in grado di diagnosticare la contaminazione di ecosistemi acquatici da pesticidi operando a livello di comunità di invertebrati acquatici. Inoltre si sono presi in considerazione anche biomarker a livello cellulare in bivalvi (Tapes philipphinarum and Mya arenaria): attività enzimatiche coinvolti nelle risposte aerobiche (CCO) e antiossidative (SOD and CAT), risposte genotossicologiche come la frequenza dei micronuclei, e, infine, a livello di organismo, risposte di carattere comportamentale. / Aquatic ecosystems are the final sink for most of contaminants introduced in the environment, especially persistent organic pollutants coming from different human activities. Most of the freshwater and coastal organisms are exposed simultaneously to different classes of chemicals, and their physiology may be affected by toxic chemical even at low environmental concentrations with a cascade event on population dynamics. Identifying ecotoxicological effects requires descriptors that are sensitive to changes in exposure and thus can indicate information at different levels of biological organisation (i.e. communities, sub-individual level). The present work aims to investigate biochemical biomarkers and bioindicators in aquatic invertebrates able to detect biological effects and predict risk of toxicity, with a special focus paid to the requirements of current EU regulation. Therefore, the present work faced on different kinds of approach identified to be efficient tools within the context of the WFD requirements (Water Frame Directive, 2000/60/EC), for investigative and operational monitoring. Work include the SPEAR approach as trait based indicator descriptor of freshwater aquatic macroinvertebrates communities, able to diagnose pesticide contamination in aquatic ecosystems. Further diagnostic approaches in environmental status are included, as assay representing biological responses for different enzymes involved in the aerobic (CCO) and antioxidant responses, (SOD, and CAT), behavioural endpoints, and genotoxicity biomarker associated with micronuclei frequency in bivalve species (Tapes philipphinarum and Mya arenaria).