Isotopic analyses of d18O and d2H of water through the hydrologic cycle have allowed hydrologists to make better interpretations related to climate and relationships between precipitation, surface water, and groundwater. In this study 394 precipitation samples 1917 surface water samples and 1405 groundwater samples across Massachusetts was used to create an isoscape for each respective water. All samples have been collected by volunteers throughout Massachusetts. A state meteoric water line: d2H = 7.7*d18O + 9.8, surface water line: d2H = 5.7*d18O – 4.2, and groundwater line: d2H = 6.5*d18O + 2.9 was created for the state of Massachusetts. The d18O isoscape for each of the above-mentioned waters shows an isotopic separation along an east-west topographic gradient where isotopes were enriched in the eastern portion of Massachusetts and depleted in the western portion of Massachusetts. Precipitation, surface water, and groundwater show unique isotopic variability. The isotopic variability of precipitation is primarily due to seasonality, moisture source and differences in topography across Massachusetts. The d18O and d2H isotopic variability of surface water is due to a biasing of precipitation as well an enrichment due to an open water system as the surface water dataset correlates with surface water type and precipitation isotopic values. The d18O and d2H isotopic variability of groundwater is due to the dampening of surface water and precipitation because of hydrogeologic processes and the biasing of surface waters that have gone through open water isotopic variability.

Insect migration stands as a phenomenon of paramount ecological importance, influencing ecosystems through a myriad of mechanisms, from facilitating pollination to aiding at disease transmission. Many insect species undertake multi-generational migrations in the Afro-tropical and Palearctic ranges, and increasing evidence highlights a number of migratory circuits across the entire Afro-Palearctic. Yet unravelling the migratory connectivity of the successive generations of these insects remains challenging given the impossibility to apply traditional biologger technology (e.g., radiotelemetry, light loggers), because of the small size, short life span and often large population sizes and ranges of insects. To address this challenge, this research pioneers the application of dual stable isotopic geolocation techniques based on hydrogen (δ2H) and strontium (⁸⁷Sr/⁸⁶Sr). Isotope geolocation consists of comparing the isotopic signatures of a mobile individual (e.g., migratory insect) to a map predicting isotope variations on the landscape (i.e., isoscape). Consequently, applying isotope geolocation to reconstruct insect migratory routes and connectivity requires the development of isoscapes across the migratory circuit. We first developed a novel δ2H isoscape in insect wing tissues across the Afro-Palearctic range. We analyzed wing tissue from resident butterflies across the Afro-Palearctic. A strong linear relationship between δ2H in local known-origin butterfly wings and local growing-season precipitation δ2H values was found across the Afro-Palearctic allowing the development of a robust isoscape. However, the relationship was weaker in the Afrotropics due to the region’s unique environmental characteristics, notably highly variable evaporation rates and relative humidity. Achieving increased geolocation precision in this region will necessitate the development of novel modeling approaches, incorporating more time-specific environmental and climate data as well as combining other independent geolocation tools. To enhance the isotope geolocation potential of migratory butterflies across the Afro-Palearctic range, we developed a bioavailable strontium isoscape. Strontium isotope variations on the landscape are usually independent from those of hydrogen providing a second level of geolocation evidence and enhancing geolocation potential. To build a ⁸⁷Sr/⁸⁶Sr isoscape, we first compiled bioavailable ⁸⁷Sr/⁸⁶Sr data across the range and analyzed a series of plant samples to fill existing spatial gaps. We then applied a novel spatial interpolation ensemble machine learning approach to predict bioavailable ⁸⁷Sr/⁸⁶Sr ratios across the range. Our analysis emphasizes the influence of factors such as geology, lithology, soil properties but also desert dust and volcanic aerosol deposition on bioavailable ⁸⁷Sr/⁸⁶Sr. The novel ensemble machine learning approach outperforms the traditional random forest regression approach and provides a better assessment of spatial uncertainty to produce the most accurate and unbiased bioavailable ⁸⁷Sr/⁸⁶Sr isoscape across the Afro-Palearctic range. As a first test to demonstrate the potential of this dual δ2H-⁸⁷Sr/⁸⁶Sr geolocation approach, we applied it to study the migratory routes and connectivity of Vanessa cardui individuals collected from each side of the Sahara Desert. Dual isotope-based metrics elucidated painted lady migration across the Sahara in unprecedented detail, notably moderate population connectivity across the Sahara with dominance of latitudinal migratory trajectories, a leapfrog migration during the southern leg across the Sahara, and incremental shorter distance migration during the northern leg of the migratory cycle. The study also highlighted the important role of the Arabian Peninsula as a significant stepping-stone for individuals traveling between Europe, Africa, and Asia. Such patterns and knowledge of this species' connectivity level will help conservation practitioners better assess risks and improve conservation strategies. In conclusion, this thesis presents two novel isoscapes, each with a range of applications. The δ2H isoscape is applicable to trace regional dispersal or migration of insects across the Palearctic, including both bidirectional migration and one-way dispersive behavior. The ⁸⁷Sr/⁸⁶Sr isoscape provides a basis to study mobility across the African continent and is applicable not only to trace the mobility of terrestrial insects but also the origin of other animals, humans, and manufactured materials across Africa. Together those isoscapes considerably advance the possibility of reconstructing the mobility of migratory insects to solve novel questions as evidenced by our case study on painted ladies.

Consumers in marine and estuarine environments have a strong reliance on planktonic and benthic primary production. These two basal resources form the foundation of aquatic food webs, yet the abundance of phytoplankton and benthic algae are frequently inversely related due to competition for light and nutrients. As a result, optimal habitats for benthic and planktonic consumers vary spatially and temporally. To investigate these trends, three studies were conducted focusing on light attenuation and basal resources in a bay, river, and on a continental shelf. δ13C and δ15N stable isotopes can be used as endogenous tracers to determine both the trophic level and basal resource use of consumers. δ13C values of primary producers are determined by the isotopic values of available CO2 and by the degree of photosynthetic fractionation (εp) that occurs during photosynthesis. εp by aquatic algae is greater in high CO2concentrations, high light, during slow growth rates, and for cells with a small surface area to volume ratio. Interaction among these parameters complicates prediction of algal εp in a natural setting, prompting the investigation as to which factors would impact εp and δ13C in a dynamic estuary. Community-level fractionation of an assemblage of filamentous algae, pennate diatoms, and centric diatoms grown on glass plates was found to be positively correlated with photosynthetically active radiation (PAR), resulting in higher δ13C values for organic matter in low-light conditions. These results support the concept that the low-light benthic environment may contribute to the widely observed phenomenon of ~5 / higher δ13C values in benthic algae compared to phytoplankton. Spatial and temporal variability in the isotopic baseline provides evidence of shifting biogeochemical controls on primary production. The West Florida Shelf in the eastern Gulf of Mexico transitions from a eutrophic ecosystem near the Mississippi River to an oligotrophic ecosystem in offshore continental shelf waters. Spatiotemporal variability in the δ13C and δ15N signatures of primary producers and fish populations were examined along this gradient. Muscle δ15N from three widely distributed fish species exhibited strong longitudinal isotopic gradients that coincided with the principal trophic gradient, whereas δ13C values of fish muscle and benthic algae were correlated with depth. The three fish species had relatively high site fidelity, as isotopic gradients were consistent between seasons and years. Isotopic mixing models showed all three fish species had a significant reliance on benthic algae as a basal resource. Dynamic models of the West Florida Shelf isotopic baseline were created using spatial data and satellite-derived water quality characteristics as predictors. Models were constructed using data from three fish species and tested on four other species to determine if the models could be extrapolated to new taxa. Both dynamic and static δ15N models had similar predictive capabilities, indicating a fairly stable δ15N baseline. The satellite-derived dynamic variables explained more variation in baseline δ13C than static spatial descriptors. Planktonic primary production can directly impact benthic food chains through phytoplankton deposition. A novel phytoplankton deposition detection method that combined water-column and benthic fluorometry with surficial sediment sampling was developed and assessed in a two-year study of the Caloosahatchee River estuary. Classifications based upon this detection method showed phytoplankton deposition dominated the upstream region and deposition was associated with reduced dissolved oxygen concentrations. Benthic algae dominated in downstream regions, particularly during low freshwater flow conditions when light absorption by colored dissolved organic matter was low. This same Caloosahatchee River estuary study was used to determine if zooplankton aggregate in regions with optimal basal resource availability. The isopod Edotia triloba was found to associate with chlorophyll peaks when freshwater velocity was constant. Chlorophyll peaks were offset downstream or upstream from isopod aggregations when freshwater flow was accelerating or decelerating, implying that phytoplankton and isopods have different response times to changes in flow. Temporal and spatial fluctuations in water quality and primary production introduce instability to aquatic consumers that primarily rely on one basal resource. The current global trends in eutrophication and increasing planktonic production are likely to be a liability for benthic consumers due to increased benthic hypoxia and light attenuation. The results of these studies indicate that both the location of consumers and their isotopic signatures can be impacted by factors, such as light attenuation, that control benthic and planktonic primary production.

No description available.

Recent research using stable isotope analysis has shown a dependence on migrating or breeding populations of vertebrates as vectors for the transfer of marine-derived nutrients within coastal ecosystems. Sable Island, Nova Scotia, Canada supports numerous species of plants, a variety of seabird colonies (including common [Sterna hirundo] and Arctic [Sterna paradisaea] terns), the world’s largest grey seal (Halichoerus grypus) breeding colony, and a self-sustaining population of wild (feral) horses (Equus ferus caballus). I hypothesize that nitrogen cycling within this island ecosystem is highly influenced by the input of nutrients from seals and seabirds (‘biogenic vectors’), affecting primary production and potentially stabilizing higher trophic levels (i.e., horses). To examine this relation I developed a spatially-explicit isoscape for Sable Island through stable isotope analysis of nitrogen (δ15N) in samples (n = 282) of marram grass (Ammophila breviligulata). I incorporated significant variables (i.e., distance to vector colony and distance to shoreline, r2 = 0.41) into the final parsimonious interpolation model using universal co-kriging techniques. The greatest 15N enrichment occurred within the tips and along the perimeter of the island, coinciding with greater densities of grey seals, while the lowest values occurred within the centre of the island. I then identified individual contributions of seal-, tern- and horse-mediated transfer of marine-derived nutrients inland. Marram grass exhibited higher δ15N within seal (μ = 7.5‰) and tern (μ = 5‰) colonies, while horses and biogeochemical processes (i.e., volatilization, ammonification, etc.) most likely contributed to the homogeneity within the centre of the island (μ = 3.6‰). Due to the higher densities, wider distribution, and greater 15N enrichment of marram tissues, grey seals appear to be the most important vector species while seabirds have a more localized effect. The greater availability of N within vector colonies supplemented the local vegetation community, contributing to greater vegetation cover within colony boundaries. This relation had secondary effects on the horse population, which showed correspondingly higher horse δ15N values within the tips of the island (δ15N + 1.6‰) due to consumption of 15N enriched forage. I conclude that biogenic vector species promote nutrient transfer by establishing nutrient gateways which indirectly cause cascading effects throughout the food web.

A travers le monde, les zones côtières abritent une grande diversité d’ingénieurs de l’écosystème accomplissant des fonctions clés comme le recyclage de la matière organique et des nutriments. Les habitats résultants de l’activité biologique de ces espèces sont exposés à de nombreuses perturbations comme la surpêche, le piétinement ou via l’aménagement des côtes. Dans ce contexte, il est urgent de comprendre le fonctionnement de ces habitats ingénieurés et comment ils sont affectés par des perturbations croissantes. Pendant ma thèse, j’ai utilisé l’habitat récifal construit par le polychète grégaire tubicole Sabellaria alveolata comme cas d’étude. Tout d’abord, les changements environnementaux et biotiques associés à la mise en place d’un récif à S. alveolata et à sa perturbation croissante ont été évalué, se concentrant sur les paramètres du sédiment (e.g. granulométrie, contenu en matière organique) ainsi que la diversité taxonomique et les assemblages d’espèces. De manière similaire, le troisième article se penche sur le fonctionnement trophique de la communauté récifale et d’une communauté contrôle afin de comprendre les effets de la mise en place de l’espèce ingénieur sur les transferts de carbone, s’intéressant successivement à l’ensemble de la communauté des consommateurs, aux consommateurs primaires et à l’importance des sources de nourriture autochtones (microphytobenthos et Ulva sp.) vs allochtone (phytoplancton). Dans cette partie, j’ai utilisé les isotopes stables du carbone et de l’azote ainsi que différentes approches analytiques telles que des mesures de la niche isotopique et des modèles de mélange. L’article 2 a pour but de comprendre les interactions entre complexité de l’habitat récifal, hétérogénéité des sources de nourriture autochtones et échelles spatiales dans l’explication des variations du rapport isotopique du carbone de S. alveolata et d’un suspensivore associée. Dans les deux derniers chapitres, j’ai traité la question du fonctionnement de l’habitat ingénieuré de manière directe, en utilisant des incubations de carottes benthiques pour mesurer des flux biogéochimiques (e.g. demande en oxygène), ou indirecte, en utilisant des indices de diversité fonctionnelle et isotopique intégratifs. Cette dernière partie révèle l’existence d’un optimum de densité de S. alveolata, utilisée comme proxy des perturbations, où la niche trophique et le fonctionnement biogéochimique du récif sont tous les deux maximaux. / Coastal zones worldwide are home to a large diversity of ecosystem engineers that perform key functions such as the recycling of organic matter and nutrients. The habitats resulting from the biological activity of these species are exposed to numerous disturbances such as over harvesting and trampling or via coastal modification. In this context, it is becoming key to understand the functioning of these engineered habitats and how they are affected by increasing disturbances. During my PhD, I used the reef habitat built by the gregarious tubiculous polychaete Sabellaria alveolata as a study case. First, the environmental and biotic changes associated with the establishment of a S. alveolata reef and its increasing disturbance were assessed, focusing on sediment characteristics (e.g. grain-size distribution, organic matter content) along with taxonomic diversity and species assemblage. In the same vain, the third article looks into the trophic functioning of the reef community and a control community to understand the effects of the establishment of the engineer species on carbon transfers, successively looking at the whole consumer community, the primary consumers and the importance of autochthonous (microphytobenthos and Ulva sp.) vs allochthone (phytoplankton) food sources. In this part, I used carbon and nitrogen stable isotopes and different analytical approaches such as isotopic niche metrics and mixing models. Article 2 aims towards understanding the interactions between reef habitat complexity, autochthonous food source heterogeneity and spatial scales in explaining the carbon isotopic ratio variations of S. alveolata and an associated suspension-feeder. In the last two chapters, I address the functioning of the engineered habitat either directly, using benthic core incubations to measure biogeochemical fluxes (e.g. oxygen demand) or indirectly, through the use of integrative functional and isotopic diversity indices. This last part reveals the existence of an optimum value of S. alveolata density, used as a disturbance proxy, where the trophic niche and the biogeochemical functioning of the reef are both maximal.

Migratory insects are vital components of global ecosystems and provide important ecosystem services, yet the migration phenomenon is understudied in insects compared to vertebrates. In this thesis, I aim to deepen our understanding of insect migration, using the monarch butterfly Danaus plexippus (L.) and the painted lady butterfly Vanessa cardui (L.) as model systems. Studying insect migration is notoriously difficult given the small size, high abundance, and short lifespans of insects. Isotope geolocation has shown promise for overcoming these obstacles. Here, I develop and apply metals and metal isotopes, specifically strontium isotope ratios (⁸⁷Sr/⁸⁶Sr), to increase the spatial precision of isotope geolocation and demonstrate how isotopic geolocation tools can advance our understanding of insect migration at the population level. In the first chapter, I test the validity of using ⁸⁷Sr/⁸⁶Sr, lead isotopes, and a suite of 23 metals and metalloids to estimate the natal origins of migratory insects, by investigating the pathways of metal incorporation into butterfly wing tissues. Using an 8-week diet-switching experiment, I show that the concentrations of many metals in insect wings can be altered through the adult diet or dust deposition, making them poor candidates for geolocation but potentially interesting tools to study insect physiology, diet, or toxicology. For example, lead was found to accumulate on butterfly wings from external sources, and lead isotopes could potentially be used to quantify the exposure of migratory insects to metal pollution. Some metals, including Ba, Cs, Mg, Na, Rb, Sr, Ti, Tl, and U, are good candidates for developing geolocation tools. I focused on ⁸⁷Sr/⁸⁶Sr and demonstrated that, despite some caveats, this tool is valid for isotope geolocation. In the second chapter, I outline the steps required to use ⁸⁷Sr/⁸⁶Sr for the geolocation of insects, including the calibration of a spatial model of isotopic variation (i.e., an isoscape) using random forest regression. I then combine hydrogen isotope values (δ²H) and ⁸⁷Sr/⁸⁶Sr into a dual assignment framework to estimate the natal origins of a single generation of monarch butterflies in eastern North America. I demonstrate that combining these two isotopes provides a more spatially constrained estimate of natal origin than using either isotope alone. In the third chapter, I apply this framework to characterize the migratory patterns and migratory connectivity of an insect species across a geographical barrier, the Sahara. Painted ladies journeying northwards across the Sahara appear to do so in a gradual progression, although spatiotemporal sampling limitations prevented a complete characterization of this movement. In contrast, painted ladies migrating southwards appear to journey in a broad front, parallel migration pattern with little longitudinal movement. Evidence for a leapfrog migration pattern was found in the western region, wherein butterflies of northernmost origin journey farther south than butterflies bred in more southerly regions. This leapfrog migration pattern suggests distinct migratory behaviours within painted lady butterflies wherein some individuals migrate longer distances than others. In the fourth chapter, I apply isotope geolocation to characterize the migration distances of multiple individuals and assess the potential genetic differentiation of butterflies migrating distinct distances. I use δ²H and ⁸⁷Sr/⁸⁶Sr-based geographic assignment to confirm that some painted ladies migrate up to 4,000 km from Europe to sub-Saharan Africa, while others migrate shorter distances from Europe to the circum-Mediterranean region. Despite these differences in migration distance, genome-wide analysis revealed a lack of adaptive variation between short- and long-distance migrants. Instead, variation in migration distance in painted lady butterflies is likely the result of a plastic response to environmental conditions. Overall, the methodological developments presented in this thesis are a step forward in studying insect migration. The development and application of metals and metal isotopes for insect geolocation opens new avenues to study the migration phenomenon at different scales with widespread relevance for conservation and pest management.