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k-Nearest Neighbour Classification of Datasets with a Family of DistancesHatko, Stan January 2015 (has links)
The k-nearest neighbour (k-NN) classifier is one of the oldest and most important supervised learning algorithms for classifying datasets. Traditionally the Euclidean norm is used as the distance for the k-NN classifier. In this thesis we investigate the use of alternative distances for the k-NN classifier.
We start by introducing some background notions in statistical machine learning. We define the k-NN classifier and discuss Stone's theorem and the proof that k-NN is universally consistent on the normed space R^d. We then prove that k-NN is universally consistent if we take a sequence of random norms (that are independent of the sample and the query) from a family of norms that satisfies a particular boundedness condition. We extend this result by replacing norms with distances based on uniformly locally Lipschitz functions that satisfy certain conditions. We discuss the limitations of Stone's lemma and Stone's theorem, particularly with respect to quasinorms and adaptively choosing a distance for k-NN based on the labelled sample. We show the universal consistency of a two stage k-NN type classifier where we select the distance adaptively based on a split labelled sample and the query. We conclude by giving some examples of improvements of the accuracy of classifying various datasets using the above techniques.
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Applying Supervised Learning Algorithms and a New Feature Selection Method to Predict Coronary Artery DiseaseDuan, Haoyang 15 May 2014 (has links)
From a fresh data science perspective, this thesis discusses the prediction of coronary artery disease based on Single-Nucleotide Polymorphisms (SNPs) from the Ontario Heart Genomics Study (OHGS). First, the thesis explains the k-Nearest Neighbour (k-NN) and Random Forest learning algorithms, and includes a complete proof that k-NN is universally consistent in finite dimensional normed vector spaces. Second, the thesis introduces two dimensionality reduction techniques: Random Projections and a new method termed Mass Transportation Distance (MTD) Feature Selection. Then, this thesis compares the performance of Random Projections with k-NN against MTD Feature Selection and Random Forest for predicting artery disease. Results demonstrate that MTD Feature Selection with Random Forest is superior to Random Projections and k-NN. Random Forest is able to obtain an accuracy of 0.6660 and an area under the ROC curve of 0.8562 on the OHGS dataset, when 3335 SNPs are selected by MTD Feature Selection for classification. This area is considerably better than the previous high score of 0.608 obtained by Davies et al. in 2010 on the same dataset.
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Applying Supervised Learning Algorithms and a New Feature Selection Method to Predict Coronary Artery DiseaseDuan, Haoyang January 2014 (has links)
From a fresh data science perspective, this thesis discusses the prediction of coronary artery disease based on Single-Nucleotide Polymorphisms (SNPs) from the Ontario Heart Genomics Study (OHGS). First, the thesis explains the k-Nearest Neighbour (k-NN) and Random Forest learning algorithms, and includes a complete proof that k-NN is universally consistent in finite dimensional normed vector spaces. Second, the thesis introduces two dimensionality reduction techniques: Random Projections and a new method termed Mass Transportation Distance (MTD) Feature Selection. Then, this thesis compares the performance of Random Projections with k-NN against MTD Feature Selection and Random Forest for predicting artery disease. Results demonstrate that MTD Feature Selection with Random Forest is superior to Random Projections and k-NN. Random Forest is able to obtain an accuracy of 0.6660 and an area under the ROC curve of 0.8562 on the OHGS dataset, when 3335 SNPs are selected by MTD Feature Selection for classification. This area is considerably better than the previous high score of 0.608 obtained by Davies et al. in 2010 on the same dataset.
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