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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Stress driven changes in the kinetics of bilayer embedded proteins: a membrane spandex and a voltage-gated sodium channel

Boucher, Pierre-Alexandre 27 May 2011 (has links)
Bilayer embedded proteins are affected by stress. This general affirmation is, in this thesis, embodied by two types of proteins: membrane spandex and voltage-gated sodium channels. In this work, we essentially explore, using methods from physics, the theoretical consequences of ideas drawn from experimental biology. Membrane spandex was postulated to exist and we study the theoretical implications and possible benefits for a cell to have such proteins embedded in its bilayer. There are no specific membrane spandex proteins, rather any protein with a transition involving a large enough area change between two non-conducting states could act as spandex. Bacterial cells have osmovalve channels which open at near-lytic tensions to protect themselves against rupture. Spandex expanding at tensions just below the osmovalves’ opening tension could relieve tension enough as to avoid costly accidental osmovalve opening due to transient bilayer tension excursions. Another possible role for spandex is a tension-damper: spandex could be used to maintain bilayer tension at a fixed level. This would be useful as many bilayer embedded channels are known to be modulated by tension. The Stress/shear experienced in traumatic brain injury cause an immediate (< 2 min) and irreversible TTX-sensitive rise in axonal calcium. In situ, this underlies an untreatable condition, diffuse axonal injury. TTX sensitivity indicates that leaky voltage-gated sodium (Nav) channels mediate the calcium increase. Wang et al. showed that the mammalian adult CNS Nav isoform, Nav1.6, expressed in Xenopus oocytes becomes “leaky” when subjected to bleb-inducing pipette aspiration. This “leaky” condition is caused by a hyperpolarized-shift (left-shift or towards lower potentials, typically 20 mV) of the kinetically coupled processes of activation and inactivation thus effectively degrading a well-confined window conductance into a TTX-sensitive Na leak. We propose experimental protocols to determine whether this left-shift is the result of an all-or-none or graded process and whether persistent Na currents are also left-shifted by trauma. We also use modeling to assess whether left-shifted Nav channel kinetics could lead to Na+ (and hence Ca2+ ) loading of axons and to study saltatory propagation after traumatizing a single node of Ranvier.
2

Stress driven changes in the kinetics of bilayer embedded proteins: a membrane spandex and a voltage-gated sodium channel

Boucher, Pierre-Alexandre 27 May 2011 (has links)
Bilayer embedded proteins are affected by stress. This general affirmation is, in this thesis, embodied by two types of proteins: membrane spandex and voltage-gated sodium channels. In this work, we essentially explore, using methods from physics, the theoretical consequences of ideas drawn from experimental biology. Membrane spandex was postulated to exist and we study the theoretical implications and possible benefits for a cell to have such proteins embedded in its bilayer. There are no specific membrane spandex proteins, rather any protein with a transition involving a large enough area change between two non-conducting states could act as spandex. Bacterial cells have osmovalve channels which open at near-lytic tensions to protect themselves against rupture. Spandex expanding at tensions just below the osmovalves’ opening tension could relieve tension enough as to avoid costly accidental osmovalve opening due to transient bilayer tension excursions. Another possible role for spandex is a tension-damper: spandex could be used to maintain bilayer tension at a fixed level. This would be useful as many bilayer embedded channels are known to be modulated by tension. The Stress/shear experienced in traumatic brain injury cause an immediate (< 2 min) and irreversible TTX-sensitive rise in axonal calcium. In situ, this underlies an untreatable condition, diffuse axonal injury. TTX sensitivity indicates that leaky voltage-gated sodium (Nav) channels mediate the calcium increase. Wang et al. showed that the mammalian adult CNS Nav isoform, Nav1.6, expressed in Xenopus oocytes becomes “leaky” when subjected to bleb-inducing pipette aspiration. This “leaky” condition is caused by a hyperpolarized-shift (left-shift or towards lower potentials, typically 20 mV) of the kinetically coupled processes of activation and inactivation thus effectively degrading a well-confined window conductance into a TTX-sensitive Na leak. We propose experimental protocols to determine whether this left-shift is the result of an all-or-none or graded process and whether persistent Na currents are also left-shifted by trauma. We also use modeling to assess whether left-shifted Nav channel kinetics could lead to Na+ (and hence Ca2+ ) loading of axons and to study saltatory propagation after traumatizing a single node of Ranvier.
3

Stress driven changes in the kinetics of bilayer embedded proteins: a membrane spandex and a voltage-gated sodium channel

Boucher, Pierre-Alexandre 27 May 2011 (has links)
Bilayer embedded proteins are affected by stress. This general affirmation is, in this thesis, embodied by two types of proteins: membrane spandex and voltage-gated sodium channels. In this work, we essentially explore, using methods from physics, the theoretical consequences of ideas drawn from experimental biology. Membrane spandex was postulated to exist and we study the theoretical implications and possible benefits for a cell to have such proteins embedded in its bilayer. There are no specific membrane spandex proteins, rather any protein with a transition involving a large enough area change between two non-conducting states could act as spandex. Bacterial cells have osmovalve channels which open at near-lytic tensions to protect themselves against rupture. Spandex expanding at tensions just below the osmovalves’ opening tension could relieve tension enough as to avoid costly accidental osmovalve opening due to transient bilayer tension excursions. Another possible role for spandex is a tension-damper: spandex could be used to maintain bilayer tension at a fixed level. This would be useful as many bilayer embedded channels are known to be modulated by tension. The Stress/shear experienced in traumatic brain injury cause an immediate (< 2 min) and irreversible TTX-sensitive rise in axonal calcium. In situ, this underlies an untreatable condition, diffuse axonal injury. TTX sensitivity indicates that leaky voltage-gated sodium (Nav) channels mediate the calcium increase. Wang et al. showed that the mammalian adult CNS Nav isoform, Nav1.6, expressed in Xenopus oocytes becomes “leaky” when subjected to bleb-inducing pipette aspiration. This “leaky” condition is caused by a hyperpolarized-shift (left-shift or towards lower potentials, typically 20 mV) of the kinetically coupled processes of activation and inactivation thus effectively degrading a well-confined window conductance into a TTX-sensitive Na leak. We propose experimental protocols to determine whether this left-shift is the result of an all-or-none or graded process and whether persistent Na currents are also left-shifted by trauma. We also use modeling to assess whether left-shifted Nav channel kinetics could lead to Na+ (and hence Ca2+ ) loading of axons and to study saltatory propagation after traumatizing a single node of Ranvier.
4

Déclenchement d'activité ectopique et infidélité de la transmission dans un axone endommagé : une modélisation fondée sur le décalage cinétique des canaux sodiques

Lachance, Mathieu 08 January 2014 (has links)
Les neurones endommagés développent de l'activité ectopique, c'est-à-dire qu'ils déchargent en l'absence de stimulus, ce qui engendre ensuite des douleurs neuropathiques. Des mesures expérimentales ont lié cette activité ectopique à un décalage cinétique (coupled left-shift, CLS) des canaux sodiques tensiodépendants. Nous avons donc construit un modèle numérique d'axone où une portion endommagée subit un tel décalage. Deux résultats fondamentaux et nouveaux sont obtenus : 1) En présence d'activité ectopique, une stimulation à haute fréquence peut entraîner la zone ectopique de l'axone à décharger à la même fréquence que le stimulus. La propagation est alors presque normale. 2) Dans un axone faiblement endommagé, sans activité ectopique au départ, un stimulus temporaire peut déclencher une activité ectopique qui perdure. Ceci amplifie le stimulus et peut donc être lié aux symptômes de douleurs neuropathiques. En plus de ces travaux de recherche, cette thèse propose une imposante section pédagogique, adressé au physicien qui débute en neurosciences. Injured neurons exhibit ectopic activity (ie. they fire without being stimulated), leading to neuropathic pain. Experiments have linked this ectopic activity to a kinetic shift (coupled left-shift, CLS) of the voltage-gated sodium channels. Therefore, we have designed a computational model axon where a damaged zone is affected by such a left-shift. Two important novel results were obtained : 1) In an ectopic axon, high-frequency stimulation can force the ectopic zone to phase-lock to the stimulation frequency. Propagation is then almost normal. 2) In a weakly damaged axon, without initial ectopic activity, a short stimulus can trigger a long lasting ectopic activity. This amplifies the stimulus and can thus be linked to neuropathic pain-like symptoms. In addition to this research work, this thesis encompasses a large educational section, addressed to physicists just starting in neuroscience.
5

Stress driven changes in the kinetics of bilayer embedded proteins: a membrane spandex and a voltage-gated sodium channel

Boucher, Pierre-Alexandre January 2011 (has links)
Bilayer embedded proteins are affected by stress. This general affirmation is, in this thesis, embodied by two types of proteins: membrane spandex and voltage-gated sodium channels. In this work, we essentially explore, using methods from physics, the theoretical consequences of ideas drawn from experimental biology. Membrane spandex was postulated to exist and we study the theoretical implications and possible benefits for a cell to have such proteins embedded in its bilayer. There are no specific membrane spandex proteins, rather any protein with a transition involving a large enough area change between two non-conducting states could act as spandex. Bacterial cells have osmovalve channels which open at near-lytic tensions to protect themselves against rupture. Spandex expanding at tensions just below the osmovalves’ opening tension could relieve tension enough as to avoid costly accidental osmovalve opening due to transient bilayer tension excursions. Another possible role for spandex is a tension-damper: spandex could be used to maintain bilayer tension at a fixed level. This would be useful as many bilayer embedded channels are known to be modulated by tension. The Stress/shear experienced in traumatic brain injury cause an immediate (< 2 min) and irreversible TTX-sensitive rise in axonal calcium. In situ, this underlies an untreatable condition, diffuse axonal injury. TTX sensitivity indicates that leaky voltage-gated sodium (Nav) channels mediate the calcium increase. Wang et al. showed that the mammalian adult CNS Nav isoform, Nav1.6, expressed in Xenopus oocytes becomes “leaky” when subjected to bleb-inducing pipette aspiration. This “leaky” condition is caused by a hyperpolarized-shift (left-shift or towards lower potentials, typically 20 mV) of the kinetically coupled processes of activation and inactivation thus effectively degrading a well-confined window conductance into a TTX-sensitive Na leak. We propose experimental protocols to determine whether this left-shift is the result of an all-or-none or graded process and whether persistent Na currents are also left-shifted by trauma. We also use modeling to assess whether left-shifted Nav channel kinetics could lead to Na+ (and hence Ca2+ ) loading of axons and to study saltatory propagation after traumatizing a single node of Ranvier.
6

Déclenchement d'activité ectopique et infidélité de la transmission dans un axone endommagé : une modélisation fondée sur le décalage cinétique des canaux sodiques

Lachance, Mathieu January 2014 (has links)
Les neurones endommagés développent de l'activité ectopique, c'est-à-dire qu'ils déchargent en l'absence de stimulus, ce qui engendre ensuite des douleurs neuropathiques. Des mesures expérimentales ont lié cette activité ectopique à un décalage cinétique (coupled left-shift, CLS) des canaux sodiques tensiodépendants. Nous avons donc construit un modèle numérique d'axone où une portion endommagée subit un tel décalage. Deux résultats fondamentaux et nouveaux sont obtenus : 1) En présence d'activité ectopique, une stimulation à haute fréquence peut entraîner la zone ectopique de l'axone à décharger à la même fréquence que le stimulus. La propagation est alors presque normale. 2) Dans un axone faiblement endommagé, sans activité ectopique au départ, un stimulus temporaire peut déclencher une activité ectopique qui perdure. Ceci amplifie le stimulus et peut donc être lié aux symptômes de douleurs neuropathiques. En plus de ces travaux de recherche, cette thèse propose une imposante section pédagogique, adressé au physicien qui débute en neurosciences. Injured neurons exhibit ectopic activity (ie. they fire without being stimulated), leading to neuropathic pain. Experiments have linked this ectopic activity to a kinetic shift (coupled left-shift, CLS) of the voltage-gated sodium channels. Therefore, we have designed a computational model axon where a damaged zone is affected by such a left-shift. Two important novel results were obtained : 1) In an ectopic axon, high-frequency stimulation can force the ectopic zone to phase-lock to the stimulation frequency. Propagation is then almost normal. 2) In a weakly damaged axon, without initial ectopic activity, a short stimulus can trigger a long lasting ectopic activity. This amplifies the stimulus and can thus be linked to neuropathic pain-like symptoms. In addition to this research work, this thesis encompasses a large educational section, addressed to physicists just starting in neuroscience.

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