Thesis (Ph. D.)--University of Washington, 1986. / Vita. Bibliography: leaves [216]-241.

Thesis (M.S. in environmental science)--Washington State University, December 2008. / Title from PDF title page (viewed on Mar. 4, 2009). "School of Earth and Environmental Science." Includes bibliographical references (p. 24-27).

A study of plankton communities in the Strait of Georgia was undertaken in order to determine qualitatively and quantitatively the distribution in time and space of both zooplankton and phytoplankton. In order to gain some picture of the seasonal, variations in the plankton communities two cruises were made in the Strait, one in June, 1955, and the other in November 1955. 165 plankton collections were taken. A complete count of zooplankton organisms was made in 5cc. of each sample and the number of diatoms cells per liter was tabulated. Copepods and diatoms were analysed to species; other groups to class or genera. Surface temperatures were taken. The physical and chemical data, used to account for the biological distributions were obtained largely from oceanographic data already available for the area. The correlation of these data have resulted in a number of conclusions concerning the distribution of plankton in the Strait of Georgia. The chief factor affecting the general distribution of plankton in the Strait of Georgia is the salinity gradient. The inflow of fresh water from the Fraser River forms zones of varying properties, and leads to the development of different plankton communities. The extent to which physical and chemical factors may determine the presence or absence of certain organisms from the zones described is discussed. / Science, Faculty of / Zoology, Department of / Graduate

Summary in English. / Bibliography: p. [199]-210. / The primary aim of the study was to assess the status and productivity of chokka squid. Main hypotheses examined are the following: that the sharp decline in the trawl fishery catch per unit effort (CPUE) data in the early 1980s, reflects a real decline in the trawlers catch rate; that the decline in the trawl CPUE index is caused by the jig fishery removing the biomass that otherwise would be available to the trawl fishery; that the jig fishery "disturbs" the spawning process and causes a decline in subsequent recruitment. Catch and effort data from the two fisheries, as well as biomass estimates from spring and autumn research surveys, were used. The two main fisheries and the catch and effort data are described. General Linear Modelling (GLM) was performed on the CPUE data from the trawl fishery in order to obtain annual indices of abundance. Further, results from a GLM analysis on two years of monthly jig CPUE data are presented. The dynamics of the stock biomass on the spawning grounds were modelled in order to assess the effects of current levels of effort and the existing closed season on the resource. The dynamics of the stock and the fishery were captured by a simple biomass-based model. Two dynamic methods were used to estimate model parameters: 1. a process-error estimator; 2. an observation-error estimator. All model parameter were estimated by maximum likelihood, and the corresponding confidence intervals were estimated by bootstrapping.

Coccolithophores are a biogeochemically important phytoplankton group, fulfilling an important role in the global carbon cycle through primary production and the formation and export of calcium carbonate. Despite this biogeochemical importance, relatively little is known about their ecophysiology, for example their response to nutrient availability in terms of both macronutrient (nitrate, phosphate) and micronutrient (trace metal) or how this impacts on their competition with other phytoplankton groups (e.g. diatoms, Synechococcus). Hence, this study investigated the response of coccolithophores to trace metal (iron, zinc and cobalt) additions in the high latitude North Atlantic (Iceland and Irminger basins) and the Southern Ocean (Great Calcite Belt, Scotia Sea). The response of coccolithophores to environmental conditions was investigated by examining distribution patterns in situ and in targeted bioassays where natural communities were incubated with elevated levels of trace metal concentration. The wide range of initial conditions for these bioassays (e.g. temperature, macro- and micro-nutrient availability and phytoplankton community composition), provided valuable insights into coccolithophore responses to trace metal addition across a range of different biogeographic regions. These responses were investigated in terms of coccolithophore cell abundances, species composition, calcite production and growth rates, and were contrasted with responses of the total phytoplankton community (chlorophyll α) and abundances of diatoms and other phytoplankton groups (e.g. Synechococcus). The major finding of this thesis is that iron addition positively enhances coccolithophore growth rates and calcite production in both the Northern and Southern subpolar oceans. Another significant finding was that zinc addition also positively enhanced growth rates of coccolithophores (and diatoms) in a number of bioassays across the Great Calcite Belt (Southern Ocean). Thus, the trace metals iron and zinc are important micronutrients to consider in regulating coccolithophore growth and calcite production. As climate change potentially altering the flux of such trace metals to the ocean it is therefore important to further investigate the role of these micronutrients in regulating coccolithophore communities and their biogeochemical impact.

Thesis (Ph. D.)--University of Tasmania, 2003. / Title from PDF title page (viewed on Feb. 19, 2006). Includes bibliographical references (p. 290-315).

Macroalgae are abundant on shallow temperate reef environments, often forming complex communities that comprise several strata. In southern Australia, these assemblages are dominated by large canopy forming taxa from the Orders Laminariales and Fucales. The presence of subtidal fucoid macroalgae differentiates these communities from that elsewhere, and emphasises the need for local studies rather than relying on generalisations made elsewhere. Like most natural systems, temperate reefs are often threatened by human activity with degradation reported from many locations in close proximity to urban settlements. The work presented in this thesis involves an examination of the temporal and spatial variability in the structure of macroalgal communities from reefs along the Adelaide (South Australia) metropolitan coast. The work looked specifically at the effects of a dispersed sediment plume, resulting from the 1997 beach sand-replenishment dredging program, on shallow sub-tidal reef systems. An examination of the structure of canopy forming phaeophycean macroalgae in Gulf St Vincent (South Australia), noted large amounts of both spatial and temporal heterogeneity. Notwithstanding, this variation was not random, but demonstrated considerable structure that could be linked to a number of important underlying processes. In particular, macroalgal assemblages appeared as a mosaic of patches, each of which comprised a high-density state clearly dominated by a single genus (Cystophora, Sargassum, or Ecklonia), or alternatively a lower density mixed assemblage (Variable Low Abundance, VLA). Macroalgal community structure appeared to be driven by biotic interactions at small scales (metres), such that patches comprised of different species of algae in high density states rarely abutted one another. Instead, VLA assemblages frequently formed a buffer being situated between these mono generic patches. In terms of successional processes, the high-density states appeared to be relatively stable whereas the VLA state, at least in some systems, was transitory. This finding was supported by the absence of intermediary high- density states (e.g. a mix of Cystophora and Ecklonia) implying that state changes must occur via the VLA state following some form of disturbance. Larger scale patterns appeared to be driven by environmental variation, with factors such as wave exposure influencing habitat suitability for individual species and thereby affecting community composition. These phenomena were examined in terms of life history strategies that tend to promote stability, and which are common in late successional taxa. The importance of properties enhancing stability and the role of disturbance was investigated experimentally using a dispersed sediment plume, which entirely engulfed two reefs, as a pulse impact. This disturbance was of particular relevance given that degradation of macroalgal communities in close proximity to the City of Adelaide has been, at least in part, attributed to the effects of elevated levels of sediment. Follow up surveys revealed that the sedimentation from the plume had primarily affected newly recruiting individuals, with few juveniles surviving to one year of age. Over the following few years, the effect of this recruitment failure cascaded into the adult stand. In broader terms, unfavourable climatic conditions prior to the start of the study, including a particularly severe El Nino event, had a widespread effect on local assemblages, causing high levels of both adult and juvenile mortality. As such, at the commencement of the study, macroalgal communities across the study area were in the process of recovery. This was observed at control sites over the duration of the study. In contrast, recruitment failure at the sediment-affected sites retarded the recovery process, exacerbating the problems associated with prior unfavourable climatic events and leaving them in a degraded state. This study demonstrated that macroalgal assemblages are equipped (under natural conditions) to handle 'normal' environmental fluctuations (such as inter-annual variability). However, the additional stress associated with certain anthropogenic impacts has the potential to push them over the limit, causing degradation. The loss of canopy macroalgae reduces the structural complexity of the system, leading to a concomitant reduction in their ability to recover. As such, these findings are of particular relevance to those charged with the responsibility for managing near-shore marine environments. The plume was created accidentally during a dredging operation for beach sand replenishment of Adelaide's eroding shoreline. / Thesis (Ph.D.)--School of Earth and Environmental Sciences, 2004.

Thesis (Ph. D.)--University of Washington, 2002. / Vita. Includes bibliographical references (leaves 112-120).

Macroalgae are abundant on shallow temperate reef environments, often forming complex communities that comprise several strata. In southern Australia, these assemblages are dominated by large canopy forming taxa from the Orders Laminariales and Fucales. The presence of subtidal fucoid macroalgae differentiates these communities from that elsewhere, and emphasises the need for local studies rather than relying on generalisations made elsewhere. Like most natural systems, temperate reefs are often threatened by human activity with degradation reported from many locations in close proximity to urban settlements. The work presented in this thesis involves an examination of the temporal and spatial variability in the structure of macroalgal communities from reefs along the Adelaide (South Australia) metropolitan coast. The work looked specifically at the effects of a dispersed sediment plume, resulting from the 1997 beach sand-replenishment dredging program, on shallow sub-tidal reef systems. An examination of the structure of canopy forming phaeophycean macroalgae in Gulf St Vincent (South Australia), noted large amounts of both spatial and temporal heterogeneity. Notwithstanding, this variation was not random, but demonstrated considerable structure that could be linked to a number of important underlying processes. In particular, macroalgal assemblages appeared as a mosaic of patches, each of which comprised a high-density state clearly dominated by a single genus (Cystophora, Sargassum, or Ecklonia), or alternatively a lower density mixed assemblage (Variable Low Abundance, VLA). Macroalgal community structure appeared to be driven by biotic interactions at small scales (metres), such that patches comprised of different species of algae in high density states rarely abutted one another. Instead, VLA assemblages frequently formed a buffer being situated between these mono generic patches. In terms of successional processes, the high-density states appeared to be relatively stable whereas the VLA state, at least in some systems, was transitory. This finding was supported by the absence of intermediary high- density states (e.g. a mix of Cystophora and Ecklonia) implying that state changes must occur via the VLA state following some form of disturbance. Larger scale patterns appeared to be driven by environmental variation, with factors such as wave exposure influencing habitat suitability for individual species and thereby affecting community composition. These phenomena were examined in terms of life history strategies that tend to promote stability, and which are common in late successional taxa. The importance of properties enhancing stability and the role of disturbance was investigated experimentally using a dispersed sediment plume, which entirely engulfed two reefs, as a pulse impact. This disturbance was of particular relevance given that degradation of macroalgal communities in close proximity to the City of Adelaide has been, at least in part, attributed to the effects of elevated levels of sediment. Follow up surveys revealed that the sedimentation from the plume had primarily affected newly recruiting individuals, with few juveniles surviving to one year of age. Over the following few years, the effect of this recruitment failure cascaded into the adult stand. In broader terms, unfavourable climatic conditions prior to the start of the study, including a particularly severe El Nino event, had a widespread effect on local assemblages, causing high levels of both adult and juvenile mortality. As such, at the commencement of the study, macroalgal communities across the study area were in the process of recovery. This was observed at control sites over the duration of the study. In contrast, recruitment failure at the sediment-affected sites retarded the recovery process, exacerbating the problems associated with prior unfavourable climatic events and leaving them in a degraded state. This study demonstrated that macroalgal assemblages are equipped (under natural conditions) to handle 'normal' environmental fluctuations (such as inter-annual variability). However, the additional stress associated with certain anthropogenic impacts has the potential to push them over the limit, causing degradation. The loss of canopy macroalgae reduces the structural complexity of the system, leading to a concomitant reduction in their ability to recover. As such, these findings are of particular relevance to those charged with the responsibility for managing near-shore marine environments. The plume was created accidentally during a dredging operation for beach sand replenishment of Adelaide's eroding shoreline. / Thesis (Ph.D.)--School of Earth and Environmental Sciences, 2004.

Thesis (Ph.D.) - James Cook University, 2007. / Typescript (photocopy) Bibliography: leaves 183-195.