Sour rot of tomatoes, caused by Geotrichum candidum, occurs in the field and postharvest settings regularly, although postharvest losses are severe only in some years on the Eastern Shore of Virginia (ESV) and other tomato production regions. Fungicide products and cultural control methods are tested for efficacy utilizing a traditional wounding technique that does not properly reflect natural sour rot infections. A new inoculation technique was optimized for G. candidum using negative pressure to infiltrate the tomato stem scar with pathogenic spores. This new method creates consistently high rates of infection and more successfully creates infections in mature green and breaker fruit. The population of G. candidum on the Eastern Shore of VA (ESV) was characterized using multilocus sequencing technique. The resulting phylogenetic tree defines four distinct groups, including two with uncommon loci that distinguish them from the majority of the population. Thirty-seven G. candidum isolates were inoculated to media amended with ten fungicides and antimicrobial compounds commonly used in tomato production and postharvest treatments. Propiconazole and tebuconazole completely inhibited growth of all colonies. Cultivar trials were conducted to determine if resistance or tolerance to G. candidum occurs. Ten commonly grown round and Roma cultivars on the ESV were similarly susceptible to G. candidum, even at low inoculum levels. Field and postharvest surveys of sour rot on tomato fruit attempted to correlate disease incidence with weather conditions in order to better understand the cause of sporadic infection. Few patterns were seen consistently throughout harvest periods and years. Rainfall was positively correlated with disease 2-3 days before surveys and temperature was negatively correlated with disease 5-7 days before surveys. No in-field weather conditions were correlated with postharvest disease incidence. Greenhouse trials were conducted to assess the influence of water congested tomato fruit on susceptibility to sour rot. Tomato plants were exposed to water inundation to mimic rainfall and varying levels of irrigation, both in order to congest tomato fruit. Though water congestion was achieved, tomato fruit were equally susceptible to sour rot infections. / Ph. D.

O miclobutanil é fungicida quiral da família dos triazóis, comercializado como mistura racêmica. Apesar dos enantiômeros apresentarem as mesmas propriedades físico-químicas, estes podem diferir em termos de atividade, metabolismo, excreção e toxicidade. No presente trabalho, foram realizados estudos in vitro enantiosseletivos de metabolismo empregando microssomas hepáticos de humanos cujos objetivos foram determinar os parâmetros cinéticos das enzimas do citocromo P450 (CYP450) após metabolismo do miclobutanil (na forma de racemato e enantiômeros isolados), determinar quais isoformas do CYP450 são responsáveis pelo metabolismo do praguicida e também a capacidade deste praguicida em inibir as principais enzimas do CYP450. Os estudos foram realizados empregando a mistura racêmica e também os enantiômeros isolados. Para tanto, foi desenvolvido e validado um método para análise enantiosseletiva do miclobutanil em meio microssomal empregando a cromatografia líquida de alta eficiência acoplada a espectrometria de massas. A separação dos enantiômeros foi realizada na coluna Chiralpak AD® empregando metanol (100%) como fase móvel. Após a validação do método, os parâmetros cinéticos foram determinados, com valores de Vmáx, Km e CLint de 66,06 + 4,59 nmol min-1 mg-1, 3,61 + 0,88 ?mol L-1 e 18,30 mL min-1 mg-1 respectivamente, quando o substrato foi o racemato e de 305,50 + 18,39 nmol min-1 mg-1, 6,85 + 1,29 ?mol L-1 e 44,60 mL min-1 mg-1 respectivamente, quando o (+)-miclobutanil foi empregado como substrato. O (?)-miclobutanil não foi metabolizado pelas enzimas presentes nos microssomas hepáticos de humanos. As isoformas responsáveis pelo metabolismo do miclobutanil foram a CYP2C19 e a CYP3A4. Os estudos in vitro de inibição mostraram que o miclobutanil é um inibidor moderado das enzimas CYP2D6 e CYP2C9 um inibidor forte das enzimas CYP3A4/5 e CYP2C19. / Myclobutanil is a chiral triazole fungicide, sold as a racemic mixture. Although the enantiomers have the same physico-chemical properties, they may exhibit different bioactivity, metabolism, excretion and toxicity. In the present work, in vitro enantioselective metabolism studies were carried out by using human liver microsomes, aiming to determine the kinetic parameters of cytochrome P450 (CYP450) enzymes after myclobutanil metabolism and the main CYP450 isoforms involved in the metabolism. In addition, the myclobutanil inhibition capacity over the main CYP450 enzymes was evaluated. The studies were carried out with rac-myclobutanil as well as with the isolated enantiomers. To accomplish that, an enantioselective method for myclobutanil analysis was developed and validated by using high performance liquid chromatography coupled with mass spectrometry. The separation of enantiomers was realized on a Chiralpak AD® column and methanol (100%) was used as mobile phase. The enzymatic kinetics, Vmáx, Km and CLint, were: 66.06 + 4.59 nmol min-1 mg-1, 3.61 + 0.88 ?mol L-1 and 18.30 mL min-1 mg-1, respectively, for rac-myclobutanil and 305.50 + 18.39 nmol min-1 mg-1, 6.85 + 1.29 ?mol L-1 and 44.60 mL min-1 mg-1, respectively, for the (+)-myclobutanil. The (?)-myclobutanil was not metabolized by CYP450 enzymes. The isoforms involved in myclobutanil metabolism were CYP2C19 and CYP3A4. In vitro inhibition studies showed that myclobutanil is a medium inhibitor of CYP2D6 and CYP2C9 enzymes and a strong inhibitor of CYP3A4/A5 and CYP2C19 enzymes.

This study was undertaken to determine the sensitivity of grape downy mildew (DM, Plasmopara viticola) and powdery mildew (PM, Erysiphe necator) to commonly used single-site fungicides in Virginia and nearby states. DM and PM isolates were collected from 2005 to 2007. In grape leaf disc bioassays, 92% of the DM isolates were QoI (azoxystrobin)-resistant, but none were resistant to mefenoxam. Eighty-two percent of the PM isolates were QoI-resistant, but none were resistant to boscalid and quinoxyfen. The frequency of the G143A point mutation, which confers high levels of QoI resistance, was quantified in DM and PM isolates by real-time PCR. Most of the QoI-resistant DM and PM isolates contained >95% of the 143A allele. QoI-sensitive DM isolates contained less than 1% of 143A. One out of 145 and 14 out of 154 QoI-resistant DM and PM isolates (able to grow on azoxystrobin concentration ï ³ 1 µg/ml), respectively, contained less than 1% 143A. Most PM isolates exhibited reduced sensitivity to five DMI fungicides when compared to a sensitive subgroup (n=9) and compared to published reports for unexposed populations; the resistance factor (median EC50 of the entire isolate collection divided by median EC50 of sensitive subgroup) was highest for tebuconazole (360) and myclobutanil (350), followed by triflumizole (79), triadimefon (61), and fenarimol (53). Sensitivities to all five DMI fungicides, but also azoxystrobin, were moderately to strongly correlated (pairwise r-values ranging from 0.60 to 0.88). / Master of Science in Life Sciences