Ontology repair remains one of the main bottlenecks for the development of ontologies for practical use. Many automated methods have been developed for suggesting potential repairs, but ultimately human intervention is required for selecting the adequate one, and the human expert might be overwhelmed by the amount of information delivered to her. We propose a decomposition of ontologies into smaller components that can be repaired in parallel. We show the utility of our approach for ontology repair, provide algorithms for computing this decomposition through standard reasoning, and study the complexity of several associated problems.