La conversion conformationnelle de la protéine prion cellulaire PrPC neuroprotectrice en protéine prion PrPSc infectieuse et pathogène caractérise les maladies à prions. Dans le cerveau infecté par les prions, la perte de PrPC, le gain de PrPSc neurotoxique et l’inflammation concourent à la mort neuronale par des mécanismes encore mal connus.Ces travaux valident les cultures organotypiques de cervelet de souris comme système expérimental ex vivo favorable à l’étude de ces mécanismes et montrent que l’absence de PrPC aussi bien que PrPSc activent des mécanismes apoptotiques et autophagiques qui conduisent à la mort des cellules de Purkinje du cervelet. Une deuxième étude in situ chez la souris montre que la compartimentation anatomo-fonctionnelle du cervelet est un paramètre endogène de la pathogenèse des prions de tremblante 22L. Une troisième série d’expériences in situ montre que les prions provoquent l’augmentation du récepteur TNFR1 de la cytokine pro-inflammatoire TNF-α à la membrane des astrocytes enveloppant les synapses excitatrices des cellules de Purkinje dans le cortex cérébelleux de souris infectées. Ceci implique une composante astrocytaire dans la réaction des complexes synaptiques aux prions. / The conversion of the protective cellular prion protein PrPC into an infectious, neurotoxic conformer PrPSc is a feature of prion diseases. In the prion-diseased brain, the loss of PrPC, the production of pathogenic PrPSc and inflammation contribute to neuronal death by still unknown mechanisms.The present results validate cerebellar organotypic cultures as a valuable experimental system to study ex vivo these mechanisms and provide insight into the apoptotic and autophagic processes activated by the absence of PrPC in Prnp-deficient mice and by PrPSc prions and lead to the death of the cerebellar Purkinje cells. A second line of research in situ showed that the anatomo-functional compartmentation of the mouse cerebellum is an endogenous parameter of the pathogenesis of the 22L scrapie prions. Finally, another in situ approach revealed that prions increase the levels of TNFR1, a receptor for the pro-inflammatory cytokine TNF-α at the membrane of the astrocytes enveloping Purkinje cell excitatory synapses in the cerebellar cortex of infected mice. This implies that the response of synaptic complexes to prions involves a glial component.

This thesis focuses on peptides derived from the Prion, Doppel and Influenza haemagglutinin proteins in the context of bilayer interactions with model membranes and live cells. The studies involve spectroscopic techniques like fluorescence, fluorescence correlation spectroscopy (FCS), circular and linear dichroism (CD and LD), confocal fluorescence microscopy and NMR. The peptides derived from the Prion and Doppel proteins combined with their subsequent nuclear localization-like sequences, makes them resemble cell-penetrating peptides (CPPs). mPrPp(1-28), corresponding to the first 28 amino acids of the mouse PrP, was shown to translocate across cell membranes, concomitantly causing cell toxicity. Its bovine counterpart bPrPp(1-30) was demonstrated to enter live cells, with and without cargo, mainly via macropinocytosis. The mPrPp(23-50) peptide sequence overlaps with mPrPp(1-28) sharing the KKRPKP sequence believed to encompass the driving force behind translocation. mPrPp(23-50) was however found unable to cross over cell membranes and had virtually no perturbing effects on membranes. mDplp(1-30), corresponding of the first 30 N-terminal amino acids of the Doppel protein, was demonstrated to be almost as membrane perturbing as melittin. NMR experiments in bicelles implied a transmembrane configuration of its alpha-helix, which was corroborated by LD in vesicle bilayers. The positioning of the induced alpha-helix in transportan was found to be more parallel to the bilayer surface in the same model system. Positioning of the native Influenza derived fusion peptide in bilayers showed no pH dependence. The glutamic acid enriched variant however, changed its insertion angle from 70 deg to a magic angle alignment relative the membrane normal upon a pH drop from 7.4 to 5.0. Concomitantly, the alpha-helical content dramatically rose from 18% to 52% in partly anionic membranes, while the native peptide’s helicity increased only from 39% to 44% in the same conditions.

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The conformational conversion of the cellular prion protein (PrPc) to the misfolded isoform (PrPsc) is the central pathogenic event in the transmissible neurodegenerative prion diseases. The recently shown transmissibility of variant Creutzfeldt-Jakob disease by blood transfusion emphasizes the need for better understanding of the PrPc in blood. In the current thesis, we focused on blood platelet PrPc, which has not been very well described so far. In the first part of the thesis, platelet PrPc was characterized as glycosylphosphatidylinositol- anchored glycoprotein with dominant diglycosylated form. Platelet PrPc was shown to be sensitive to cleavage with proteinase K, which is a feature discriminating between cellular and pathological prion protein. We have confirmed that platelet PrPc binds copper ions by its N- terminal octapeptide repeat region. Regarding quantity of PrPc molecules expressed on blood elements we have proved that both platelets and red blood cells express considerable amount of PrPc and thus can not be neglected in the problematic of prions transmission by blood transfusion. The detailed study regarding PrPc localization in blood platelets is presented in the second part of the thesis. PrPc was shown to be expressed in -granules as well as on the cytoplasmic membrane of...

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The copper-binding ability of the prion protein may be closely connected to its function. Identifying the exact function of the prion protein can clarify the underlying mechanism in prion diseases. In this work, the copper-binding octapeptide region in the human prion protein has been studied. The structural characteristics of the binding site are examined by quantum chemical structural optimization. The calculations aim at identifying a substitute for copper(II) to be used in NMR-spectroscopic studies of the copper-binding region. The dynamical and structural features of the peptide region are investigated in molecular dynamics simulations. Aspects of importance in the development of model systems in molecular dynamics simulation are addressed. / QC 20101220

<p>Vesicle trafficking is an important process critical for secretory and endocytic purposes, but it is also crucial for cell homeostasis, <i>e.g.,</i> for maintenance of organelle identity and recycling of membrane components.</p><p>The endomembrane-located adaptor protein Epsin R (Epsin-Related protein) is believed to be important for recycling of SNARES like Vti1b from endosomes to the trans Golgi network (TGN), although its involvement in TGN to endosome transport has been also proposed. Further highlighting its impact in cellular and organismal physiology, certain <i>EPSIN R</i> SNPs have been linked to schizophrenia and Epsin R deficiencies correlate with other pathological conditions related to epidermis homeostasis such as psoriasis and eczema.</p><p>Epsin R belongs to the conserved Epsin family of adaptors and as such it presents a characteristic Epsin N-Terminal Homology (ENTH) domain and a largely unstructured C-terminus. The latter contains binding motifs for important elements of the vesicle trafficking machinery.</p><p>Here we identified a C-terminal region of Epsin R with prion-like characteristics (Prion Forming Region or PFR). We found that GFP-Epsin R is localized in intracellular punctate structures colocalizing with different intracellular markers; however, in contrast to other epsin family members, Epsin R displayed puncta of different size and with different protein content with a substantial contribution of large/bright particles. Importantly, the C-terminal Epsin R’s PFR was required for Epsin R localization and for the formation of large and bright puncta. Further, these structures displayed characteristics shared with other prion-like proteins. Our results therefore suggest that Epsin R possesses PFR-dependent prion properties that play an important role in this adaptor’s localization and function.</p><p>We propose a model in which prion-like proteins like Epsin R can rapidly and stably self-assemble at vesicle budding sites. These proteins would accelerate the formation of vesicle trafficking machinery and the recruitment of cargo. We also speculate that oligomerizing, self-templating reactions would occur under strict control of several cellular factors such as chaperones and post-translational modifications (<i>e.g.,</i> phosphorylation, ubiquitination, etc.) to assure quick and <i>reversible</i> association of prion-like proteins.</p>

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