Anthropogenic impacts, such as habitat destruction and spread of exotic species, are contributing to the sixth major extinction event in Earth’s history. To develop effective management and conservation plans, it is important to understand the ecological drivers of at-risk populations, assess the ability of a population to adapt to environmental change, and develop research methods for long-term ecosystem monitoring. I used wading birds nesting in the Florida Everglades, USA as a model system to address the challenges of managing and monitoring populations within an ecosystem greatly impacted by anthropogenic activities. Specifically, my project investigated 1) the prey selection of wading bird species, and the role of prey and foraging habitat availability on annual nesting numbers, 2) the ability of using diet change to predict species adaptability to a rapidly changing environment, and 3) the use of sensory data to provide low-cost, long-term monitoring of dynamic wetlands. I found that tricolored herons, snowy egrets, and little blue herons consumed marsh fish larger than those generally available across the landscape. Additionally, number of nests initiated by tricolored herons, snowy egrets, and little blue herons was strongly correlated with the annual densities of large fish available within the Everglades landscape. Conversely, number of nests initiated by wood storks, great egrets, and white ibises was more correlated with the amount of foraging habitat availability across the nesting season. Wood stork diets changed considerably since the 1960’s, consisting of mainly sunfish and exotic fish as opposed to marsh fishes dominant in historical diet studies. Storks also consumed more exotic fish species than they did historically. This diet plasticity and the species’ ability to exploit anthropogenic habitats may be conducive to maintaining population viability as storks experience widespread human-induced changes to their habitat. Sensory-only data models generated complementary results to models that used site-specific field data. Additionally, sensory-only models were able to detect different responses between size classes of fish to the processes that increase their concentrations in drying pools. However, the degree to which sensory variables were able to fit species data was dependent upon the ability of sensors to measure species-specific population drivers and the scale at which sensors can measure environmental change. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2016. / FAU Electronic Theses and Dissertations Collection

Life history strategy suggests long lived bird species will adjust their nesting effort according to current conditions, balancing the costs of reproduction with their long-term needs for survival and future reproduction. The habitat conditions that produce these responses may differ between species, even within the same ecosystem, producing different nesting and population trends. I traced the pathway by which food availability influences the physiological condition of pre-breeding great egrets and white ibises through to reproductive measures, and the physiological condition of chicks. I focused on these two species with contrasting foraging strategies, in relation to foraging and habitat conditions to maximize the likelihood of application of these results to other wading bird species. Experimental food supplementation and physiology research on white ibis chicks demonstrated that in years with low prey availability white ibis were food limited, with increased levels of stress protein 60 and fecal corticosterone. This is the first study to demonstrate experimentally the response of stress protein 60 to changing levels of food availability. During a year with low prey availability (2007) white ibis adults and chick physiological condition was lower than that of great egrets. During the same year, fledging success was lower for both species (20% for white ibis versus 27% for great egret) but the magnitude of the decrease was particularly severe for the white ibis (76% decline versus 66% decline for the great egret). Results suggest white ibises modify their clutch size during years with poor habitat in accordance with life history traits of a long-lived species, whereas great egrets maintained their clutch size during years with poor habitat. / Increasing recession rates, hydrological reversals, and prey densities influenced white ibis, whereas great egrets were most influenced by prey densities and recession rates, with no effect of hydrological reversal. During the same year, fledging success was lower for both species (20% for white ibis versus 27% for great egret) but the magnitude of the decrease was particularly severe for the white ibis (76% decline versus 66% decline for the great egret). Results suggest white ibises modify their clutch size during years with poor habitat in accordance with life history traits of a long-lived species, whereas great egrets maintained their clutch size during years with poor habitat. Increasing recession rates, hydrological reversals, and prey densities influenced white ibis, whereas great egrets were most influenced by prey densities and recession rates, with no effect of hydrological reversals. This study is the first to make the link between landscape hydrology patterns, prey availability, and responses in wading bird nesting. These linkages provide critical insight into how species' nesting patterns could differ given the same time and spatial constraints and how that may be related to long-term nesting trends. This knowledge could ultimately lead to novel predictions about population and community patterns of wetland birds. / by Garth Herring. / Individual abstract for each chapter. / Thesis (Ph.D.)--Florida Atlantic University, 2008. / Includes bibliographical references at the end of each chapter. / Electronic reproduction. Boca Raton, FL : 2008 Mode of access: World Wide Web.

Food availability is the primary factor affecting the reproductive success in many species of birds. Diet composition can indicate diet quality, habitat use and niche requirements for breeding birds and may be variable across short and long-term time scales. Identifying primary prey types of nesting wading birds is important for the hydrologic restoration of wetlands. I collected nestling boluses during the 2008 and 2009 nesting seasons from three species of wading birds that nest in the northern Everglades: White Ibis, Tricolored Herons and Snowy Egrets. White Ibis bolus composition was dominated by crayfish in both years, but exhibited some variation with landscape water depth in 2009; fish use was greatest when the wetland landscape was relatively dry. In contrast, the prey of Tricolored Herons and Snowy Egrets were primarily fish and their respective diets did not differ from one another in either fish species composition or size structure. / by Robin A. Boyle. / Thesis (M.S.)--Florida Atlantic University, 2010. / Includes bibliography. / Electronic reproduction. Boca Raton, Fla., 2010. Mode of access: World Wide Web.

Pigment-based chemotaxonomy uses relative amounts of photosynthetic pigments (biomarkers) within algae samples to determine the algal class composition of each sample. Chemotaxonomy has been applied successfully to phytoplankton communities, but its efficacy for periphyton has not yet been established. This study examined the ability of simultaneous linear equations (SLE), CHEMTAX, and the Bayesian Compositional Estimator (BCE) to determine algal class composition in Florida Everglades periphyton. The methods were applied to artificial datasets, mixed lab cultures of known composition, and Everglades periphyton samples for which microscopic biovolume data was available. All methods were able to return accurate sample compositions for artificial data and mixed lab cultures. Correlation between pigment methods and microscopic results for natural periphyton samples was poor. SLE and CHEMTAX returned similar results for all samples while BCE performed less well. / by Jamie L. Browne. / Thesis (M.S.)--Florida Atlantic University, 2010. / Includes bibliography. / Electronic reproduction. Boca Raton, Fla., 2010. Mode of access: World Wide Web.

Successful foraging by avian predators is influenced largely by prey availability. In a large-scale experiment at the Loxahatchee Impoundment Landscape Assessment project within the Arthur R. Marshall Loxahatchee National Wildlife Refuge, I manipulated two components of prey availability, water depth and vegetation density (submerged aquatic vegetation and emergent vegetation), and quantified the response by wading birds in terms of foraging habitat selection and foraging success. Manly's standardized selection index showed that birds preferred shallow water and intermediate vegetation densities. However, the treatments had little effect on either individual capture rate or efficiency. This was a consistent pattern seen across multiple experiments. Birds selected for certain habitat features but accrued little benefit in terms of foraging success. I hypothesize that birds selected sites with shallow water and intermediate vegetation densities because they anticipated higher prey densities, but they did not experience it here because I controlled for prey density. / by Samantha Lantz. / Thesis (M.S.)--Florida Atlantic University, 2008. / Includes bibliography. / Electronic reproduction. Boca Raton, Fla., 2008. Mode of access: World Wide Web.

It is well known that biogenic gas emissions (mainly methane and carbon dioxide) vary both spatially and temporally in peatlands. While most studies have focused on northern systems, several recent studies in tropical and subtropical peatlands (like the Everglades) have revealed the presence of areas of increased gas accumulation and emissions, or hotspots, that may be related to physical and/or biogeochemical changes within the peat's matrix. However, these studies are often limited in terms of sampling volume and resolution or are based in laboratory studies that may not be totally representative of field conditions. In this study we investigate the spatial variability (both lateral and vertical) in gas accumulation and release at the field scale, over 10 m long transects at two locations in Water Conservation Area 1 of the Florida Everglades, using an array of hydrogeophysical methods. Resulting data infers the presence of hotspots with dimensions ranging from 1-2 m in width and approximately 0.5 m tall. These areas showed high variations in biogenic gas accumulation and release an order of magnitude higher than surrounding areas and occur seasonally as the highest gas releases were observed during Florida’s wet season. This study therefore has implications for better understanding the spatial and temporal variability of biogenic gas hotspots in peat soils, and how the matrix structure affects gas accumulation and release. This study shows the importance of considering the heterogenous nature of the peat's matrix when quantifying gas fluxes in the Everglades, and particularly when using methods with small sampling volumes like gas chambers. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2019. / FAU Electronic Theses and Dissertations Collection

Diatoms are useful indicators of ecological conditions but the mechanisms driving assemblage distribution are not clearly defined. Understanding the mechanisms underlying assemblage distribution is necessary to make accurate predictions about the effects of environmental change, such as hydrologic management, restoration, and climate change. The examination of diatom distribution and key drivers across a large wetland over several years can provide a resolved spatio-temporal framework for determining the relative importance of environmental and spatial factors influencing assemblage patterns. I examined a 6-year record of diatom distribution across the Everglades, a large hydrologically-managed subtropical wetland. Successful restoration of this ecosystem depends on using reliable ecological targets and bioassessment strategies based on a comprehensive understanding of the biotic responses to the variables being manipulated, especially hydrology. The components of my research are: 1) characterizing the relationship between diatom distribution and environmental factors; 2) investigating the taxonomy of species presumably with little or no limitation to dispersal by spatial factors; and 3) examining the relative importance of environmental and spatial factors on diatom distribution patterns within a hydrologically-managed environment. Building upon the well-documented utility of Everglades diatom transfer functions for phosphorus based on species optima and tolerance ranges, I developed transfer functions for hydroperiod and biovolume of periphyton (consortium of algae, bacteria, and fungi) and evaluated the utility of resultant diatom-based inference models for bioassessment. Considering the importance of environmental factors, diatoms in the Everglades and Caribbean wetlands may have restricted distributions. My taxonomic investigation of two species with presumed continental distributions and the consequent description of two new species suggest spatial factors can restrict diatom dispersal. The importance of both environmental and spatial controls on Everglades diatom distribution may be related to the availability of calcareous (high mineral content) periphyton that diatoms inhabit because periphyton mineral content is correlated with environmental factors, which differ among compartments within the ecosystem because of hydrologic management. I found environmental factors were more important controls on the distribution of persistent inhabitants of calcareous periphyton, suggesting spatial factors are relatively less important when species are well-suited to the habitats made available by environmental conditions influenced by hydrologic management.

This project investigates the potential of the 27 Everglades green algal strains for producing biodiesel. The five potential strains chosen by measuring the neutral lipid content using the Nile red method were Coelastrum 46-4, Coccoid green 64-12, Dactylococcus 64-10, Stigeoclonium 64-8 and Coelastrum 108-5. Coelastrum 108-5 and Stigeoclonium 64-8 yielded the same amount of lipids in both Gravimetric and Nile red method. A linear relationship between algal biomass and lipid accumulation was seen in Coelastrum 46-4, Coccoid green 64-12, Stigeoclonium 64-8 and Coelastrum 108-5 indicating that increase in algal biomass increased the lipid accumulation. Nitrogen and phosphorous stress conditions were also studied where higher lipid accumulation was observed significantly (p < 0.05) in 64-8 Stigeoclonium and 64-12 Coccoid green. Collectively, it could be summarized that Coelastrum 108-5, Coccoid green 64-12 and Stigeoclonium 64-8 were promising in some aspects and could be used for further studies.

Wetland loss and degradation have led to the development of restoration programs worldwide, many of which monitor wading bird populations as indicators of wetland quality. Therefore, efficient, standardized monitoring is integral to restoration progress. I tested the use of passive acoustic monitoring to estimate nest abundances and provisioning rates in wading bird colonies and examined regional nesting dynamics in the Florida Everglades, where a long monitoring record enables analysis of nesting patterns relative to hydrologic changes. I found that call rates can serve as indices of colony nest abundances and begging call rate and timing are indicative of provisioning events. Nesting dynamics suggested that resource availability is asynchronous between regions of the Everglades, but the degree of asynchrony varies with species. The conclusions of this study will facilitate the long-term monitoring of wading bird nesting trends, which are important measures of wetland restoration in Florida and worldwide. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2021. / FAU Electronic Theses and Dissertations Collection

The Florida Everglades is considered as a vulnerable wetland composed primary of organic rich peat soils, experiencing saltwater intrusion. Impact of increasing salinity on the strength and deformation properties of peat is unknown. A laboratory study was undertaken to evaluate how the growing salinity level due to sea level rise may alter the compressibility behavior of the Everglades soils. Sixteen 1-dimensional oedometer tests were conducted on undisturbed Everglades peat soils in two phases. Phase I included samples from Site 1 (saltwater) and Site 3 (freshwater) without any salinity addition. Phase II consisted of soil from Site 3 (freshwater) saturated in six different levels of salinity artificially added to the samples. Compressibility properties investigated in this study include compression index (Cc), coefficient of consolidation (Cv), hydraulic conductivity (K), and the Ca/Cc ratio. In general, it was observed that the increase in salinity beyond a threshold value tends to increase the soil compressibility properties, indicating a possible reduction in soil stability with saltwater intrusion. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2021. / FAU Electronic Theses and Dissertations Collection