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Proton tunnelling in the hydrogen bond studies by NMRXue, Qiang January 2003 (has links)
No description available.
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Developing a Method to Study Ground State Properties of Hydrogen ClustersSchmidt, Matthew D.G. 02 September 2014 (has links)
This thesis presents the benchmarking and development of a method to study ground state properties of hydrogen clusters using molecular dynamics. Benchmark studies are performed on our Path Integral Molecular Dynamics code using the Langevin equation for finite temperature studies and our Langevin equation Path Integral Ground State code to study systems in the zero-temperature limit when all particles occupy their nuclear ground state. A simulation is run on the first 'real' system using this method, a parahydrogen molecule interacting with a fixed water molecule using a trivial unity trial wavefunction. We further develop a systematic method of optimizing the necessary parameters required for our ground state simulations and introduce more complex trial wavefunctions to study parahydrogen clusters and their isotopologues orthodeuterium and paratritium. The effect of energy convergence with parameters is observed using the trivial unity trial wavefunction, a Jastrow-type wavefunction that represents a liquid-like system, and a normal mode wavefunction that represents a solid-like system. Using a unity wavefunction gives slower energy convergence and is inefficient compared to the other two. Using the Lindemann criterion, the normal mode wavefunction acting on floppy systems introduces an ergodicity problem in our simulation, while the Jastrow does not. However, even for the most solid-like clusters, the Jastrow and the normal mode wavefunctions are equally efficient, therefore we choose the Jastrow trial wavefunction to look at properties of a range of cluster sizes. The energetic and structural properties obtained for parahydrogen and orthodeuterium clusters are consistent with previous studies, but to our knowledge, we may be the first to predict these properties for neutral paratritium clusters. The results of our ground state simulations of parahydrogen clusters, namely the distribution of pair distances, are used to calculate Raman vibrational shifts and compare to experiment. We investigate the accuracy of four interaction potentials over a range of cluster sizes and determine that, for the most part, the ab initio derived interaction potentials predict shifts more accurately than the empirically based potentials for cluster sizes smaller than the first solvation shell and the trend is reversed as the cluster size increases. This work can serve as a guide to simulate any system in the nuclear ground state using any trial wavefunction, in addition to providing several applications in using this ground state method.
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A Self-Consistent-Field Perturbation Theory of Nuclear Spin Coupling ConstantsBlizzard, Alan Cyril 05 1900 (has links)
Scope and Content stated in the place of the abstract. / The principal methods of calculating nuclear spin coupling constants
by applying perturbation theory to molecular orbital wavefunctions for the
electronic structure of molecules are discussed. A new method employing a
self-consistent-field perturbation theory (SCFPT) is then presented and compared
with the earlier methods.
In self-consistent-field (SCF) methods, the interaction of an
electron with other electrons in a molecule is accounted for by treating the
other electrons as an average distribution of negative charge. However, this
charge distribution cannot be calculated until the electron-electron interactions
themselves are known. In the SCF method, an initial charge distribution
is assumed and then modified in an iterative calculation until the
desired degree of self-consistency is attained. In most previous perturbation
methods, these electron interactions are not taken into account in a self consistent
manner in calculating the perturbed wavefunction even when SCF
wavefunctions are used to describe the unperturbed molecule.
The main advantage of the new SCFPT approach is that it treats the interactions between electrons with the same degree of self-consistency
in the perturbed wavefunction as in the unperturbed wavefunction. The
SCFPT method offers additional advantages due to its computational
efficiency and the direct manner in which it treats the perturbations.
This permits the theory to be developed for the orbital and dipolar contributions
to nuclear spin coupling as well as for the more commonly
treated contact interaction.
In this study, the SCFPT theory is used with the Intermediate
Neglect of Differential Overlap (INDO) molecular orbital approximation to
calculate a number of coupling constants involving 13c and 19F. The
usually neglected orbital and dipolar terms are found to be very important
in FF and CF coupling. They can play a decisive role in explaining the
experimental trend of JCF among a series of compounds. The orbital interaction
is found to play a significant role in certain CC couplings.
Generally good agreement is obtained between theory and experiment
except for JCF and JFF in oxalyl fluoride and the incorrect signs obtained
for cis JFF in fluorinated ethylenes. The nature of the theory permits
the latter discrepancy to be rationalized in terms of computational details.
The value of JFF in difluoracetjc acid is predicted to be -235 Hz.
The SCFPT method is used with a theory of dπ - pπ bonding to predict
in agreement with experiment that JCH in acetylene will decrease when that
molecule is bound in a transition metal complex. / Thesis / Doctor of Philosophy (PhD)
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Etudes structurelles et dynamiques de systèmes atomiques ou moléculaires par génération d'harmoniques d'ordre élevéHiguet, Julien 15 October 2010 (has links)
La génération d'harmoniques d'ordre élevé en milieu gazeux est un phénomène décrit par un modèle à trois étapes: sous l'effet d'un champ laser intense, un atome (ou une molécule) est ionisé par effet tunnel. L'électron éjecté est par la suite accéléré dans le champ laser, avant de se recombiner sur son ion parent en émettant un photon XUV. D'abord utilisée dans le but de développer des sources de rayonnement secondaire dans le domaine XUV, la génération d'harmoniques d'ordre élevé est également un bon candidat pour sonder la structure électronique des atomes ou des molécules, avec une résolution potentielle de l'ordre de l'attoseconde dans le domaine temporel (1 as=10-18 s) et sub-nanométrique dans le domaine spatial.Au cours des travaux réalisés pendant cette thèse, nous avons étudié la sensibilité des caractéristiques du rayonnement harmonique (amplitude, état de polarisation, phase) à la structure électronique du milieu de génération. Ces études ont été menées tout d'abord dans un milieu atomique couramment utilisé en génération d'harmonique, l'argon, puis dans des milieux moléculaires (N2, CO2, O2). La confrontation de ces mesures avec différentes simulations numériques montre la nécessité de modéliser de façon détaillée le processus de génération, dépassant certaines hypothèses généralement admises.Nous avons également montré la possibilité d'utiliser la spectroscopie d'harmoniques d'ordre élevé afin de mesurer des dynamiques moléculaires de systèmes complexes (notamment le dioxyde d'azote NO2), pour lesquelles les mesures harmoniques peuvent obtenir des résultats complémentaires aux autres techniques couramment utilisées. Dans le cas d'excitations moléculaires peu efficaces, nous avons pu adapter des techniques de spectroscopie optique conventionnelle au domaine spectral des harmoniques d'ordre élevé, améliorant de manière significative le rapport signal/bruit. / High harmonic generation is a well known phenomenon explained by a “three step” model: because of the high intensity field generated by an ultrashort laser pulse, an atom or a molecule can be tunnel ionized. The ejected electron is then accelerated by the intense electric field, and eventually can recombine on its parent ion, leading to the emission of a XUV photon. Because of the generating process in itself, this light source is a promising candidate to probe the electronic structure of atoms and molecules, with an attosecond/sub-nanometer potential resolution (1 as=10-18 s).In this work, we have studied the sensitivity of the emitted light (in terms of amplitude, but also phase and polarization) towards the electronic structure of the generating medium. We have first worked on atomic medium, then on molecules (N2, CO2, O2). Comparing the experimental results with numerical simulations shows the necessity to model finely the generation process and to go beyond commonly used approximations.We have also shown the possibility to perform high harmonic spectroscopy in order to measure dynamics of complex molecules, such as Nitrogen Dioxide (NO2). This technic has obtained complementary results compared to classical spectroscopy and has revealed dynamics of the electronic wavepacket along a conical intersection. In this experiment, we have adapted conventionnal optical spectroscopy technics to the XUV spectral area, which significantly improved the signal over noise ratio.
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