Macrophages are professional phagocytes that efficiently clear microbes, dying cells, and debris. Nonetheless, some pathogenic bacteria and parasites can subvert the macrophage phagosome into a vacuolar replicative niche. Exogenous macrophage activation by the cytokine interferon gamma (IFNγ) tips the equilibrium toward pathogen restriction, host survival, and subsequent adaptive immune responses. The relevance of IFNγ-induced immunity to human health has been demonstrated in patients with genetic defects in IFNγ signaling, who are profoundly susceptible to vacuolar pathogens such as Mycobacterium tuberculosis. Still, much remains to be discovered about IFNγ effector functions, and about their co-regulation by signaling downstream of the many innate immune sensors in macrophages.
First, we asked whether IFNγ-induced vesicle trafficking mechanisms affect the maturation of phagosomes containing the bacterium Legionella pneumophila, the causative agent of Legionnaire's disease. We used functional genetic screening to discover candidate genes involved. From 380 genes in a curated vesicle trafficking-related set, 15 were selected as candidate IFNγ pathway members by RNAi screening in cell line and primary mouse macrophages. Functional validation of top candidates was inconclusive, but revealed potential roles for membrane tetraspanins and the AP3 complex in IFNγ-induced microbial restriction.
Our second goal was to determine whether innate immune sensing affects IFNγ-induced bacterial restriction. Using macrophages from mice deficient in key elements of innate immune sensing pathways, we discovered that the antiviral transcription factor IRF3, which functions downstream of many nucleic acid sensing pathways, suppresses IFNγ-induced restriction of L. pneumophila and the protozoan parasite Trypanosoma cruzi. While activated IRF3 localizes to the nuclei in resting macrophages infected with L. pneumophila, it is mostly excluded from nuclei in macrophages activated with IFNγ prior to infection. This suggests a cascade of suppression in which IFNγ responses inhibit IRF3 activation, but residual IRF3 activity antagonizes IFNγ effectors. IRF3-mediated inhibition of IFNγ-inducible nitric oxide synthase was partially, but incompletely responsible for the phenotype observed; further candidate effectors were identified by gene expression profiling. We speculate that antagonism between IFNγ and IRF3-mediated mechanisms may facilitate a balance of vacuolar pathogen immunity with viral defense, or with protection of tissue damage by nitric oxide and other IFNγ-dependent responses.
| Identifer | oai:union.ndltd.org:harvard.edu/oai:dash.harvard.edu:1/13064967 |
| Date | 02 January 2017 |
| Creators | Maciag, Karolina |
| Contributors | Hacohen, Nir |
| Publisher | Harvard University |
| Source Sets | Harvard University |
| Language | en_US |
| Detected Language | English |
| Type | Thesis or Dissertation |
| Rights | open |
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