Subterranean arthropod communities are important components of North American ecosystems, contributing numerous ecosystem services and essential food-web functions. Despite this, fundamental information about species diversity in these communities remains unknown, and their taxonomic composition and ecological diversity have scarcely been assessed. Subterranean pitfall traps are a commonly used method for sampling endogean and hypogean soil habitats in Europe but have never been widely implemented in North America. Here, I employed this method to sample subterranean arthropod communities in the Ridge and Valley and Blue Ridge ecoregions of Virginia, USA in the winter and spring. In total, 2,260 arthropod specimens were collected constituting 319 distinct species. I extracted and purified DNA and amplified the mitochondrial gene: cytochrome C oxidase subunit I (COI) from each recovered morphospecies and derived a unique COI barcode for each species sequenced. Objective sequence clustering was used to establish molecular operational taxonomic units (mOTUs) for downstream diversity analyses and establishment of dynamic identification resources. Total species richness and average species richness per site were assessed and compared for both regions and seasons. The Shannon-Wiener diversity index, Hutcheson's t-test, and effective numbers of species (ENS) were employed to compare regional subterranean arthropod diversity. The richness, Shannon-Wiener, and ENS comparisons indicated that both ecoregions encompass highly diverse subterranean arthropod communities with those of the Ridge and Valley being significantly more diverse than those of the Blue Ridge. / Master of Science in Life Sciences / Arthropods are invertebrate animals with hard exoskeletons, segmented bodies, and jointed paired appendages, and include insects, arachnids, crustaceans, and myriapods. Arthropods make up the majority of animal species on the planet and are important parts of ecosystems, making it important for researchers to study them. While we know a fair amount about North American arthropods that live above-ground, relatively little is known about those that live deep within the soil and underlying rock substrate. Subterranean pitfall traps are a common method used for collecting arthropods from subterranean habitats in various regions of the world but have rarely been used in the USA. As a result, much of the life beneath our feet may be unknown. I used these traps to collect subterranean arthropods in the Ridge and Valley and Blue Ridge regions of the Appalachian Mountains. A total of 2,260 individual arthropods were collected, belonging to 319 different species. I used DNA sequencing to establish a unique fingerprint-like "barcode" for each species. These barcodes serve as helpful identification resources, and will help name new species in the future. They also allowed me to measure the number of species (diversity) of subterranean arthropods collected from each region, and compare the two to determine which region is more diverse. I used common statistical metrics of diversity including species richness (number of species) and the Shannon-Wiener diversity index to compare regional subterranean arthropod diversity. My results show that both the Ridge and Valley and Blue Ridge regions of Virginia, USA are home to highly diverse subterranean arthropod communities and those of the Ridge and Valley are significantly more diverse than those of the Blue Ridge.
| Identifer | oai:union.ndltd.org:VTETD/oai:vtechworks.lib.vt.edu:10919/115477 |
| Date | 21 June 2023 |
| Creators | Harrison, Garrett Taylor |
| Contributors | Entomology, Marek, Paul E., Del Pozo-Valdivia, Alejandro, Ivanov, Kaloyan Y. |
| Publisher | Virginia Tech |
| Source Sets | Virginia Tech Theses and Dissertation |
| Language | English |
| Detected Language | English |
| Type | Thesis |
| Format | ETD, application/pdf |
| Coverage | Virginia, United States |
| Rights | In Copyright, http://rightsstatements.org/vocab/InC/1.0/ |
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