The ratio of auxin to cytokinin determines de novo organogenesis in plants. Relatively little is known about the effect of genetically altered auxin signaling on in vitro organogenesis. Here, callusogenesis, shoot, and root formation were studied in loss- (LOF) and gain-of-function (GOF) alleles in two phylogenetically related Auxin Response Factors (ARFs), MONOPTEROS (MP/ARF5) and NON-PHOTOTROPHIC HYPOCOTYL 4 (NPH4/ARF7). Reduced MP activity greatly diminished shoot regeneration, and partially diminished callusogenesis and root formation. LOF in NPH4 strongly decreased callusogenesis, and mildly decreased shoot and root regeneration in particular categories of explants. By contrast, organogenesis responses were strongly increased in aerial explants carrying the GOF transgene dMP. Thus, both MP and NPH4 seem to act as positive regulators of certain organogenesis processes and the GOF dMP transgene may be of interest for stimulating organogenesis in plant species with poor regeneration properties. Also, organogenesis in vitro may reveal unknown developmental ARF functions.

The ratio of auxin to cytokinin determines de novo organogenesis in plants. Relatively little is known about the effect of genetically altered auxin signaling on in vitro organogenesis. Here, callusogenesis, shoot, and root formation were studied in loss- (LOF) and gain-of-function (GOF) alleles in two phylogenetically related Auxin Response Factors (ARFs), MONOPTEROS (MP/ARF5) and NON-PHOTOTROPHIC HYPOCOTYL 4 (NPH4/ARF7). Reduced MP activity greatly diminished shoot regeneration, and partially diminished callusogenesis and root formation. LOF in NPH4 strongly decreased callusogenesis, and mildly decreased shoot and root regeneration in particular categories of explants. By contrast, organogenesis responses were strongly increased in aerial explants carrying the GOF transgene dMP. Thus, both MP and NPH4 seem to act as positive regulators of certain organogenesis processes and the GOF dMP transgene may be of interest for stimulating organogenesis in plant species with poor regeneration properties. Also, organogenesis in vitro may reveal unknown developmental ARF functions.

Light microscopy, low ionic strength solution culture and image analysis methods were used to make detailed measurements on root hair populations of different genotypes of white clover (Trifolium repens L.) and ryegrass (Lolium perenne L.). A model of root hair population structure was developed and validated that will facilitate research on root hairs of these species. Diagrams were drawn of the root hair length and frequency on entire root systems. The distributions of root hairs on these diagrams often differed from textbook diagrams of root hairs because root hair length and frequency varied considerably along the root axis. The key issue examined was the response at species, population and genotype levels of root hair populations perturbed by aluminium and phosphate, and the implications of these responses for our understanding of the strategies adopted by plants growing in stressful environments. Demographic growth analysis gave the best understanding of the mechanisms of root hair population response to genetic variability, resource depletion and environmental perturbation. Root hair length seemed to be controlled by the individual root hair. However the number of root hairs appeared to be controlled by the root. Therefore it is the root that controls the distribution of the hairs on the root, and how this distribution is modified by perturbation. Root hair populations were shown to have strategies that were similar to their shoot system growth strategies-guerrilla for clover, phalangeal for ryegrass. The root and root hair systems, and shoot systems also demonstrated similar characteristics when the r and K strategy model was applied. At an ecosystem level, clover and ryegrass occupied the same orthogonal in the CSR (competitive-stress-ruderal) model. Therefore at a larger scale, these plants are able to coexist, but they do this by having different strategies at a species level. / Subscription resource available via Digital Dissertations only.

Light microscopy, low ionic strength solution culture and image analysis methods were used to make detailed measurements on root hair populations of different genotypes of white clover (Trifolium repens L.) and ryegrass (Lolium perenne L.). A model of root hair population structure was developed and validated that will facilitate research on root hairs of these species. Diagrams were drawn of the root hair length and frequency on entire root systems. The distributions of root hairs on these diagrams often differed from textbook diagrams of root hairs because root hair length and frequency varied considerably along the root axis. The key issue examined was the response at species, population and genotype levels of root hair populations perturbed by aluminium and phosphate, and the implications of these responses for our understanding of the strategies adopted by plants growing in stressful environments. Demographic growth analysis gave the best understanding of the mechanisms of root hair population response to genetic variability, resource depletion and environmental perturbation. Root hair length seemed to be controlled by the individual root hair. However the number of root hairs appeared to be controlled by the root. Therefore it is the root that controls the distribution of the hairs on the root, and how this distribution is modified by perturbation. Root hair populations were shown to have strategies that were similar to their shoot system growth strategies-guerrilla for clover, phalangeal for ryegrass. The root and root hair systems, and shoot systems also demonstrated similar characteristics when the r and K strategy model was applied. At an ecosystem level, clover and ryegrass occupied the same orthogonal in the CSR (competitive-stress-ruderal) model. Therefore at a larger scale, these plants are able to coexist, but they do this by having different strategies at a species level. / Subscription resource available via Digital Dissertations only.

Light microscopy, low ionic strength solution culture and image analysis methods were used to make detailed measurements on root hair populations of different genotypes of white clover (Trifolium repens L.) and ryegrass (Lolium perenne L.). A model of root hair population structure was developed and validated that will facilitate research on root hairs of these species. Diagrams were drawn of the root hair length and frequency on entire root systems. The distributions of root hairs on these diagrams often differed from textbook diagrams of root hairs because root hair length and frequency varied considerably along the root axis. The key issue examined was the response at species, population and genotype levels of root hair populations perturbed by aluminium and phosphate, and the implications of these responses for our understanding of the strategies adopted by plants growing in stressful environments. Demographic growth analysis gave the best understanding of the mechanisms of root hair population response to genetic variability, resource depletion and environmental perturbation. Root hair length seemed to be controlled by the individual root hair. However the number of root hairs appeared to be controlled by the root. Therefore it is the root that controls the distribution of the hairs on the root, and how this distribution is modified by perturbation. Root hair populations were shown to have strategies that were similar to their shoot system growth strategies-guerrilla for clover, phalangeal for ryegrass. The root and root hair systems, and shoot systems also demonstrated similar characteristics when the r and K strategy model was applied. At an ecosystem level, clover and ryegrass occupied the same orthogonal in the CSR (competitive-stress-ruderal) model. Therefore at a larger scale, these plants are able to coexist, but they do this by having different strategies at a species level. / Subscription resource available via Digital Dissertations only.

Light microscopy, low ionic strength solution culture and image analysis methods were used to make detailed measurements on root hair populations of different genotypes of white clover (Trifolium repens L.) and ryegrass (Lolium perenne L.). A model of root hair population structure was developed and validated that will facilitate research on root hairs of these species. Diagrams were drawn of the root hair length and frequency on entire root systems. The distributions of root hairs on these diagrams often differed from textbook diagrams of root hairs because root hair length and frequency varied considerably along the root axis. The key issue examined was the response at species, population and genotype levels of root hair populations perturbed by aluminium and phosphate, and the implications of these responses for our understanding of the strategies adopted by plants growing in stressful environments. Demographic growth analysis gave the best understanding of the mechanisms of root hair population response to genetic variability, resource depletion and environmental perturbation. Root hair length seemed to be controlled by the individual root hair. However the number of root hairs appeared to be controlled by the root. Therefore it is the root that controls the distribution of the hairs on the root, and how this distribution is modified by perturbation. Root hair populations were shown to have strategies that were similar to their shoot system growth strategies-guerrilla for clover, phalangeal for ryegrass. The root and root hair systems, and shoot systems also demonstrated similar characteristics when the r and K strategy model was applied. At an ecosystem level, clover and ryegrass occupied the same orthogonal in the CSR (competitive-stress-ruderal) model. Therefore at a larger scale, these plants are able to coexist, but they do this by having different strategies at a species level. / Subscription resource available via Digital Dissertations only.

Light microscopy, low ionic strength solution culture and image analysis methods were used to make detailed measurements on root hair populations of different genotypes of white clover (Trifolium repens L.) and ryegrass (Lolium perenne L.). A model of root hair population structure was developed and validated that will facilitate research on root hairs of these species. Diagrams were drawn of the root hair length and frequency on entire root systems. The distributions of root hairs on these diagrams often differed from textbook diagrams of root hairs because root hair length and frequency varied considerably along the root axis. The key issue examined was the response at species, population and genotype levels of root hair populations perturbed by aluminium and phosphate, and the implications of these responses for our understanding of the strategies adopted by plants growing in stressful environments. Demographic growth analysis gave the best understanding of the mechanisms of root hair population response to genetic variability, resource depletion and environmental perturbation. Root hair length seemed to be controlled by the individual root hair. However the number of root hairs appeared to be controlled by the root. Therefore it is the root that controls the distribution of the hairs on the root, and how this distribution is modified by perturbation. Root hair populations were shown to have strategies that were similar to their shoot system growth strategies-guerrilla for clover, phalangeal for ryegrass. The root and root hair systems, and shoot systems also demonstrated similar characteristics when the r and K strategy model was applied. At an ecosystem level, clover and ryegrass occupied the same orthogonal in the CSR (competitive-stress-ruderal) model. Therefore at a larger scale, these plants are able to coexist, but they do this by having different strategies at a species level. / Subscription resource available via Digital Dissertations only.

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Doctor of Philosophy / Agronomy / Kevin Price / Stephen M. Welch / Plant phenotyping has been studied for decades for understanding the relationship between plant genotype, phenotype, and the surrounding environment. Improved accuracy and efficiency in plant phenotyping is a critical factor in expediting plant breeding and the selection process. In the past, plant phenotypic traits were extracted using invasive and destructive sampling methods and manual measurements, which were time-consuming, labor-intensive, and cost-inefficient. More importantly, the accuracy and consistency of manual methods can be highly variable. In recent years, however, photogrammetry and 3D modeling techniques have been introduced to extract plant phenotypic traits, but no cost-efficient methods using these two techniques have yet been developed for large-scale plant phenotyping studies. High-throughput 3D modeling techniques in plant biology and agriculture are still in the developmental stages, but it is believed that the temporal and spatial resolutions of these systems are well matched to many plant phenotyping needs. Such technology can be used to help rapid phenotypic trait extraction aid crop genotype selection, leading to improvements in crop yield. In this study, we introduce an automated high-throughput phenotyping pipeline using affordable imaging systems, image processing, and 3D reconstruction algorithms to build 2D mosaicked orthophotos and 3D plant models. Chamber-based and ground-level field implementations can be used to measure phenotypic traits such as leaf length, rosette area in 2D and 3D, plant nastic movement, and diurnal cycles. Our automated pipeline has cross-platform capabilities and a degree of instrument independence, making it suitable for various situations.