The Agulhas Current plays a critical role in both local and global ocean circulation and climate regulation, yet the mechanisms that determine the seasonal cycle of the current remain poorly understood. Model studies predict an austral winter-spring maximum in poleward volume transport, whilst observations reveal an austral summertime (February-March) maximum. Here, the role of winds on Agulhas Current seasonality is investigated using shallow water models, satellite measurements, and a 23-year transport proxy based on observations. A one-and-a-half layer reduced gravity model is shown to successfully reproduce the seasonal phasing of the current. This seasonality is found to be highly sensitive to the propagation speed of Rossby waves, which determines the arrival time of the wind stress signal at the western boundary. By matching Rossby wave speeds to those observed using altimetry, an Agulhas Current with a maximum flow in February and a minimum flow in July is simulated, agreeing well with observations. Near-field winds, to the west of 35◦E, dominate this seasonality, as signals from more remote wind forcing dissipate due to destructive interference while crossing the basin. Local winds driving coastal upwelling/downwelling directly over the Agulhas cannot, alone, account for the observed seasonal phasing, as they force a NovemberDecember maximum and June minimum in flow. The seasonal response to Indian Ocean winds is also investigated using a barotropic (single layer) model with realistic topography. A barotropic adjustment cannot explain the observed Agulhas Current seasonality, predicting a wintertime maximum in transport. The results from the barotropic simulation are similar to previous model studies, where seasonality is dominated by a southward propagation of signals via the Mozambique Channel, suggesting that these models are too barotopic in their response to the winds. Findings from this study elucidate the role of near-field winds and baroclinic processes in determining the seasonality of the Agulhas Current.

Thesis (Ph.D.)--University of Rhode Island, 2008. / Includes bibliographical references (leaves 297-308).

The Agulhas Undercurrent Experiment took place in February-March 2003 off the east coast of South Africa and included 112 CTD and LADCP casts along four cross-slope sections and three offshore sections. Direct absolute velocities in the Agulhas Current show a narrow and swift current, 180 km wide and up to 2 m s-1 in speed, that deepens as it flows south, eventually detaching from the continental slope at 36ºS. Results also show the northward Agulhas Undercurrent against the continental slope, beneath the Agulhas Current with peak velocities of 10 cm s-1. Several mesoscale cyclonic eddies extending down to the intermediate layer were sampled during the survey, in particular a shear-edge eddy inshore of the Agulhas Current at 36ºS. A deep water anticyclonic eddy was found for the first time in this region centered at 2800 m in the northward flowing North Atlantic Deep Water (NADW) layer. Anomalous water properties reveal that it was formed in the Agulhas Retroflection region and may have been generated by the coupling of a deep Agulhas Ring with the NADW slope current in the SE Atlantic and later entrained into the deep flow of the Agulhas Return Current, until ejected in the Agulhas Current region by localized recirculations in the deep layers of the Agulhas Current system. An inverse model was applied to the hydrographic and LADCP data; results show that the Agulhas Current had a considerably higher transport of 103 Sv at the historical 32ºS section than earlier estimates, consistent with altimetry time series for the region. The growth of the Agulhas Current transport is given primarily by the Sverdrup transport from the supergyre connecting the southern Pacific and Indian Oceans, and the Indonesian Throughflow and Indian Ocean overturning need to be included to account for the total transport. The bulk of the Agulhas Current transport is concentrated in the thermocline layer in the cross-sections and in the intermediate layer in the offshore sections. Inshore of the Agulhas Current core, mixing is inhibited from the surface to the thermocline layers, with no transport growth downstream. Cross-stream mixing does appear to occur in the intermediate layer. The Mozambique Channel and East Madagascar Current appear to have similar contributions as sources to the Agulhas Current at the northern most section of 16 Sv each, with the Indian Ocean wind-driven sub-gyre contribution increasing as the current flows southward. In the intermediate layer, Red Sea Water is actively mixing with Antarctic Intermediate Water when eddies are present. Red Sea Water appears to advect in the form of parcels and not as a continuous flow. Results also suggest the occurrence of small localized recirculations in the deep layers. In the deepest layer of lower NADW the flow is upwelling into the overlaying layer due to the shallowing topography at the northern most section.

As the estimated market demand for the Agulhas sole Austroglossus pectoralis exceeds the annual catch from trawlers, this species is a potential aquaculture candidate. Broodstock conditioning and gamete preservation is part of research and development aiming at establishing a breeding protocol for a new aquaculture species. Based on a literature review of the morphology of pleuronectiform spermatozoa, this study was designed firstly, to contribute to the field of spermatozoan morphology by describing the ultrastructure of A. pectoralis spermatozoa. This was followed by an experiment to cryopreserve mature spermatozoa to provide baseline data for future studies on this and related species. The testis of A. pectoralis was a paired structure encased in a membrane, the tunica albuginea. The primary testis was located on the dorsal surface of the rib cage and the secondary testis on the ventral side. The testis was of an unrestricted spermatogonial type, based upon observations of spermatogonia along the entire length of the lobule. Mature spermatozoa of A. pectoralis had an acrosome-free ovoid head 1.68 ± 1.6μm in length and 1.7 ± 1.6μm in diameter, a short mid-piece of 0.5 ± 0.1μm in length, containing 7 irregularly shaped mitochondria forming a ring-like structure at the base of the nucleus. The flagellae were 47.4 ± 4.8μm in length, most with two plasma membrane lateral fin-like projections. However, some flagellae had either zero or three lateral fin projections. Cross-sections of the flagellae showed an axenome with a 9+2 microtubule configuration. The proximal and distal centriols were coaxal, situated deep within the nuclear fossa. The structure of A. pectoralis spermatozoa conformed to the type 1 ect-aquasperm, also found in externally fertilizing species. This type has been suggested to be the plesiomorphic form in Neopterigians. Finally, this study contributed to a cryopreservation protocol for A. pectoralis spermatozoa by testing the two cryoprotectants dimethyl sulphoxide (DMSO) and glycerol. Glycerol, at a concentration of 10%, offered better cryoprotection than DMSO. This was established using flow cytometry analysis of post-thaw nuclear membrane integrity after 64 days of storage in liquid nitrogen. The toxicity of DMSO to isolated cellular proteins may have resulted in DMSO-treated sperm having the highest percent (35.2% ± 3.2%) of non-viable cells compared with 23.0% ± 2.5% and 27.8% ± 3.4% for glycerol and the control, respectively. The presence of sucrose in the Modified Mounib Medium extender solution may explain why 45.5% ± 5% of the sperm cells were potentially viable in the control treatment. Initially, the white margined sole Dagatichthys marginatus (Soleidae) was selected as the most suitable candidate for flatfish aquaculture in South Africa. Thus, the aim of this study was to investigate the cryogenic potential and ultrastructure of D. marginatus spermatozoa. However, due to a skewed sex ratio, there were not enough males available to study this species. A skewed sex ratio is common amongst soleids, thus, the need to develop effective cryopreservation methods and to develop an understanding of sperm morphology so that the best time for cryopreservation can be chosen. In conclusion, this first description of spermatozan morphology of A. pectoralis contributed to our understanding of soleid sperm ultrastructure. In addition, a comparison of testis appearance between fish sampled just prior to spawning season and fish with mature sperm provided information on the spawning season of this species. The findings from the cryopreservation experiment suggested that glycerol was a feasible cryoprotectant for this species when sperm was prepared under field conditions.

Thesis submitted in fulfilment of the requirements for the degree Master of Technology: Oceanography in the Faculty of Applied Sciences at the Cape Peninsula University of Technology / In order to validate remote sensing products and to provide data for model assimilation, a real-time monitoring line consisting of three moorings was deployed across the Agulhas Current off Port Edward, South Africa. This deployment formed part of a Technology and Human Resource for Industry Programme (THRIP) funded initiative to develop a real-time mooring system capable of measuring ocean parameters in the Agulhas Current during 2011. The slope and offshore moorings displayed a distinct stratified regime within the Agulhas Current, a northeastward flowing Agulhas Undercurrent and the southwestward flowing Agulhas Current. Three major reversal events, with northeastward currents occurred on 23 July, 02 September and on 11 October 2011. All current reversals caused a decrease in current velocity. The Agulhas Undercurrent was a persistent feature and average velocities between the line of moorings ranged between 13.38 cm/s and 15.52 cm/s. The results obtained from the mooring systems were consistent in terms of velocity, direction and hydrographic properties of the Agulhas Current as described in previous literature. The low directional variability in the surface layers at the offshore mooring and dominant southwestward flow, except during reversal events indicate the strong influence of the Agulhas Current in this region. The inshore mooring showed less occurrences of the Agulhas Undercurrent if northward flow in the bottom layers was to be considered as signs of the Agulhas Undercurrent. General current characteristics as well as the characterisation of the mesoscale features affecting the coast off Port Edward was accomplished through the use of the in situ moorings. All current reversals encountered were associated with the process of vortex shedding from the Natal Bight. These events may be related to the shedding of the Durban Cyclonic Eddy from its origin in the Natal Bight. Data from the offshore mooring suggested that for monitoring Agulhas Current core dynamics, it was ideally placed as highest surface velocities were measured by this mooring system. The slope mooring recorded highest velocities within the Agulhas Undercurrent and was thus ideally placed to measure the Agulhas Undercurrent’s core. Shelf dynamics were under the influence of the Agulhas Current and northerly current reversals and were aptly recorded by the inshore mooring which was placed on the continental shelf, close to the shelf break.

This study examines the efficacy of Sentinel-1 Radial Velocity (RVL) imagery at determining the position of ocean current front features, using the Gulf Stream (GS) and Agulhas Current (AC) as case studies. Fronts derived from RVL imagery are compared to fronts derived from Sea Surface Temperature (SST) imagery, specifically Multi-scale Ultra-high Resolution Sea Surface Temperature Analysis (MURSST) data. In the case of the GS, front locations from the Naval Oceanographic Office (NAVOCEANO) were also used for comparison. Only the northern walls of ocean current features are considered in this study, which is broken into three main steps: Preprocessing, front extraction, and front comparison. First, RVL imagery is selected from Sentinel-1 ocean products, preprocessed to remove antenna mispointing artifacts, and all products from the same orbit are combined into a single swath. Second, front features are extracted from both the RVL and MURSST imagery using a ridge detection algorithm, the main ocean current is chosen from all ridge features using a ranking algorithm, and the northern wall of this current is extracted. Third, the RVL, SST, and in the case of the GS, NAVOCEANO GS locations, features are compared using a symmetric Hausdorff Distance (HD) measure, and Mean Hausdorff Distance (MHD). In some cases, the automatic front extraction failed by either misclassifying an eddy or similar ocean feature as the ocean current in either the RVL or SST image or failed to extract the entire length of the front visible within the image. All the SST and RVL fronts were classified manually to determine the success rate of the automatic front extraction and to exclude failed front extractions from the analysis, as they are not accurate representations of the SST and RVL data’s ability to detect fronts. In special cases, the RVL image itself does not detect the entire ocean current, such that there are noticeable gaps in the ocean current. Similarly, in special cases the MURSST does not detect the entire ocean current. The automatic front extraction succeeded 65% of the time, including the special cases. The results demonstrated that RVL products were effective at determining the location of ocean fronts where the angle of the front's normal vector is within approximately 40° of the sensor’s azimuthal heading. A mean HD of 31.9 km and a mean MHD of 13.2 km was calculated for all front pairs over all study areas. The RVL fronts appeared consistently to the north of the SST fronts, with an average offset of 25.4 km between the centroids of the SST and RVL fronts. Positive correlations were noted between cloud coverage and MURSST error in both study regions. Several RVL images detected ocean currents in regions of high MURSST error where the MURSST did not detect the ocean currents, suggesting that RVL may provide more accuracy than SST-based products in clouded regions where there is no auxiliary data.

L’océan Indien est le lieu de processus atmosphériques et océaniques majeurs dont les répercussions en terme climatique peuvent être de grandes importances. Cette thèse se propose de documenter les forçages, les variabilités, les impacts et les interactions de la mousson Indo-asiatique et du courant des Aiguilles à l’échelle orbitale (incluant les conditions glaciaires-interglaciaires) au cours de la période Quaternaire.Si le maximum d’insolation (minimum de précession et maximum d’obliquité) initie les fortes moussons Indo-asiatiques, des forçages internes au système climatique jouent également un rôle majeur pour expliquer leur dynamique (fort vents et précipitations), en particulier le changement de volume de glace de l’hémisphère Nord et l’export de chaleur latente de l’océan Indien Sud. La prédominance de ces forçages internes est propre à la mousson Indo-asiatique et la distingue des moussons boréales Africaines. Ceci indique que le concept de mousson globale n’est pas valable à l’échelle orbitale.Concernant l’hémisphère Sud, les variations de température de surface du courant des Aiguilles exercent un contrôle important sur le climat Sud Africain (la végétation et les précipitations). Ce courant permet également le transfert plus ou moins important de chaleur et de sel vers l’océan Atlantique Sud par l’intermédiaire de la migration de la convergence subtropicale et des vents d’ouest associés. Ce mécanisme, contrôlé fortement par la dynamique des hautes latitudes Sud, affecte la circulation thermo-haline globale et constitue un acteur important des transitions glaciaires-interglaciaires et des changements de mode de variabilité climatique au cours du Quaternaire (Transition Mid-Pleistocène et évènement du Mid-Brunhes). Les changements induits dans le climat de l’Hémisphère Nord, et notamment le volume de glace, pourraient ensuite se répercuter sur la dynamique de la mousson. En revanche, l’effet des moussons sur le courant des Aiguilles parait mineur. Toutefois, les interactions entre la mousson Indo-asiatique, l’ENSO et les éventuels IOD (dipôles climatiques de l’océan Indien) pourraient affecter la dynamique du courant. / The Indian Ocean is the place of major atmospheric and oceanic processes with large potential repercussions on the global climatic system. This thesis investigates forcing, variations, impacts and interactions of the Indo-Asian monsoon and of the Agulhas current at the orbital scale (including glacial-interglacial conditions) over the Quaternary period.Insolation maximum (precession minimum and obliquity maximum) initiates strong Indo-Asian monsoons, but processes internal to the climate system, in particular Northern Hemisphere (NH) ice volume changes and the latent heat export of the south Indian Ocean, play a major role to explain their dynamics (strongest winds and precipitation). The predominance of these internal forcings is a specificity of the Indo-Asian monsoon and distinguishes it from African boreal monsoons. This indicates that the concept of a global monsoon at the orbital scale is a misnomer.Concerning the Southern hemisphere, sea surface temperature variations of the Agulhas current exert an important control upon the South African climate (vegetation and precipitation). This current also participates to the transfer of heat and salt towards the South Atlantic Ocean whose intensity is mainly related to the migration of the subtropical convergence and associated westerlies winds. This mechanism, strongly controlled by high southern latitudes dynamics, affects the global overturning circulation and plays an important role for glacial-interglacial transitions and changes in modes of climate variability during the Quaternary (Mid-Pleistocene Transition and Mid-Brunhes event). Induced Northern hemisphere climate changes, in particular ice volume, could in turn influence monsoon dynamics. On the other hand, the effect of monsoons on the Agulhas current seems to be of minor importance. However, interactions between the Indo-Asian monsoon, ENSO and the possible IOD (Indian Ocean climatic Dipole) could affect the dynamic of the current.