INTRODUÇÃO: O destreinamento físico está relacionado com alterações moleculares associadas à perda de massa muscular, rápido acréscimo da massa adiposa, ganho de peso e resistência à insulina. Estudos apontam que a restrição calórica reduz a gordura corporal, contudo, associada com a inatividade física, altera o metabolismo proteico acelerando o catabolismo muscular. Nesse sentido, estudos com suplementação de aminoácidos essenciais, em especial a leucina, observam aumento na síntese proteica e redução da degradação proteica em situações de restrição ou recuperação nutricional. Dessa forma sugere-se que a restrição calórica associada à suplementação com leucina poderia atenuar os efeitos desencadeados pelo destreinamento físico. OBJETIVO: Investigar a influência da suplementação crônica de leucina na via de sinalização da síntese proteica e degradação proteica no tecido muscular a partir de parâmetros moleculares em ratos destreinados, submetidos à restrição calórica. MÉTODOS: Foram utilizados 64 ratos Sprague-Dawley machos e adultos, inicialmente distribuídos em 2 grupos: Controle (CON) (n = 16) representados pelos animais sedentários, e Treinamento (TREIN) (n = 48) que foram submetidos ao treinamento em esteira ergométrica durante oito semanas. Após esse período, os animais foram redistribuído em 6 grupos: Sedentário (SED), Treinamento (TREIN), Destreinamento (DT), Destreinamento + Leucina (LEU), Destreinamento + Restrição Calórica (DTRC) e Destreinamento + Restrição Calórica + Leucina (DTRC + LEU). Foram analisados massa corporal, consumo da ração, composição corporal, sensibilidade a insulina bem como os marcadores de inflamação (IL-6; IL-10; MCP-1; TNF-α; 1L-1α; PAI-1; leptina; adponectina) e parâmetros moleculares como genes e proteínas envolvidas na via de sinalização da síntese protéica (mTOR, P-4EBP1, P-s6K1 e eIF4E); degradação proteica (MAFBx e MURF) além de transportadores de aminoácidos (LAT-1 e SNAT 2 e CD98). ESTATÍSTICA: Os valores foram expressos em média e desvio padrão. As comparações entre os grupos após o período de destreinamento físico foram avaliadas por meio de análise de variância (ANOVA), seguida do teste de Tukey. Em todas as análises foi considerado nível de significância de 5%. A análise estatística foi realizada no software SPSS versão 17.0. RESULTADOS: Em relação à composição corporal, foi observada diferença estatisticamente significativa na gordura corporal e massa livre de gordura entre os grupos DTRC e DTRC+LEU, em relação aos demais grupos experimentais. Porém não houve diferença estatística entre o DTRC e DTRC+LEU. No entanto não foi observada diferença estatisticamente significativa quando avaliado a proteína da carcaça. Em relação aos parâmetros moleculares, não foi observada diferença estatisticamente significativa entre os grupos, quando avaliada a expressão de proteínas relacionadas com a via de sinalização de síntese proteica (mTOR, P-4EBP1, P-s6K1 e eIF4E) e transportadores de leucina (LAT- 1;SNAT-2;CD(98). Quanto avaliada a expressão gênica da via de degradação, foi observada uma menor expressão do gene MURF quando suplementado com leucina, porém sem diferença estatisticamente significativa. CONCLUSÃO: A restrição calórica associada com a suplementação com leucina foi efetiva na redução da gordura corporal, e aumento da massa livre de gordura, porém não houve diferença estatisticamente significante entre os dois grupos DTRC e DTRC+LEU, tampouco quando avaliada a proteína da carcaça desses animais. Dessa forma, pode-se concluir que a suplementação crônica com leucina não reverteu os efeitos desencadeados pelo destreinamento físico, e, além disso, não foi suficiente para alterar os parâmetros moleculares envolvidos na via de sinalização de síntese e degradação proteica desses animais. / INTRODUCTION: Physical detraining is related to molecular changes associated with loss of muscle mass, rapid increase in fat mass, weight gain and insulin resistance. Studies show that caloric restriction reduces body fat; however, associated with physical inactivity, it alters protein metabolism accelerating muscle catabolism. Accordingly, studies with supplementation of essential amino acids, particularly leucine, observed increase in protein synthesis and reduced protein degradation in situation of nutritional restriction or recovery. Thus, it is suggested that caloric restriction associated with leucine supplementation could attenuate the effects triggered by physical detraining. OBJECTIVE: To investigate the influence of chronic leucine supplementation in the signaling pathway of protein synthesis and degradation in muscle tissue from molecular parameters in detrained rats, subjected to caloric restriction. METHODS: Sixty-four adult male and female Sprague-Dawley rats were used, initially divided into 2 groups: Control (CON) (n = 16) represented by sedentary animals, and Trained (TRAIN) (n = 48) who underwent treadmill training for eight weeks. After this period, the animals were re-distributed into 6 groups: Sedentary (SED), Trained (TRAIN), Detrained (DT), Detrained + Leucine (LEU), Detrained + Caloric Restriction (DTRC) and Detrained + Caloric Restriction + Leucine (DTRC + LEU). Body mass, food consumption, body composition, insulin sensitivity were analyzed, as well as inflammation markers (IL-6; IL-10; MCP-1; TNF-α; 1L-1α; PAI-1; leptin; adiponectin) and molecular parameters, such as genes and proteins involved in signaling pathways of protein synthesis (mTOR, P-4EBP1, P-s6K1 and eIF4E); protein degradation (MAFBx and MURF) and also amino acid transporters (LAT-1, SNAT 2 and CD98). STATISTICAL ANALYSIS: Values were expressed as mean and standard deviation. Analysis of variance (ANOVA) was used for comparisons between groups after physical detraining, followed by Tukey\'s test. A 5% significance level was considered in all analyses. Statistical analysis was performed using SPSS software, version 17.0. RESULTS: In relation to body composition, a statistically significant difference was observed in body fat and fat free mass between groups DTRC and DTRC+LEU, compared with other experimental groups. However, there was no statistical difference between groups DTRC and DTRC+LEU. Nevertheless, no statistically significant difference was found when carcass protein was assessed. In relation to molecular parameters, no statistically significant difference was observed between groups, when protein expression related to the signaling pathway of protein synthesis (mTOR, P-4EBP1, P-s6K1 and eIF4E) and leucine transporters (LAT-1;SNAT-2;CD(98) was assessed. When gene expression of the degradation pathway was investigated, a lower expression of gene MURF was found with leucine supplementation; however, this was not statistically different. CONCLUSION: Caloric restriction associated with leucine supplementation was effective in reducing body fat, and increasing fat free mass; however, no statistically significant difference was found between groups DTRC and DTRC+LEU, nor when carcass protein of these animals was assessed. Therefore, it was concluded that chronic leucine supplementation did not reverse the effects triggered by physical detraining and, in addition, it was not sufficient to change the molecular parameters involved in the signaling pathway of protein synthesis and degradation of these animals.

published_or_final_version / Zoology / Master / Master of Philosophy

Obesity is an ever-growing concern in the developed world that carries with it a plethora of health issues. For example, obesity increases an individual’s risk for Type 2 Diabetes and cardiovascular disease. Pregnancy is a vital time for a woman to maintain optimal health, both for her own benefit as well as that of her offspring, and yet almost half of women in the United States who are of age to bear children are overweight or obese. In mice, we found that offspring born to dams fed a high fat diet did not have impaired glucose tolerance, contrary to our hypothesis. In addition, we challenged the offspring with a high fat diet, and found no difference in glucose tolerance as a result of maternal diet. Exercise is at the opposite end of the wellness spectrum – individuals who exercise experience many health benefits. Even overweight or obese individuals who exercise without losing weight have improved insulin sensitivity, for example. Studies have previously used voluntary running and found that offspring born to exercised dams have improved glucose tolerance. With the goal of controlling variable running times and distances, we developed a novel model of controlled exercise and have shown that it is a safe intervention that warrants further study. In addition, many individuals choose to take dietary supplements for various reasons. Branched chain amino acids (BCAAs) are a common dietary supplement that have been shown to increase lean mass, and may be implicated in glucose metabolism. We supplemented female mice with BCAAs for 16 weeks and found that exercise plus BCAAs improved body composition compared to sedentary control-diet fed animals, when exercise alone did not. In summary, we herein explore a number of health behaviors in female mice, both negative treatments such as consumption of a high fat diet and positive interventions such as exercise and BCAA supplementation, and the impact that they may have on the female animal and/or her offspring.

Thesis (Ph.D.)--Baylor University, 2008. / Includes bibliographical references (p. 100-109)

Thesis (Ph.D.)--Baylor University, 2008. / Includes bibliographical references (p. 121-133)

The creation of enzymes displaying desired substrate specificity is an important objective of enzyme engineering. To help achieve this goal, computational protein design (CPD) can be used to identify sequences that can fulfill interactions required to productively bind a desired substrate. Standard CPD protocols find optimal sequences in the context of a single state, for example an enzyme structure with a single substrate bound at its active site. However, many enzymes catalyze reactions requiring them to bind multiple substrates during successive steps of the catalytic cycle. The design of multi-substrate enzyme specificity requires the ability to evaluate sequences in the context of multiple substrate-bound states because mutations designed to enhance activity for one substrate may be detrimental to the binding of a second substrate. Additionally, many enzymes undergo conformational changes throughout their catalytic cycle and the equilibrium between these conformations can have an impact on their substrate specificity. In this thesis, I present the development and implementation of two multistate computational protein design methodologies for the redesign of multi-substrate enzyme specificity and the modulation of enzyme conformational equilibrium. Overall, our approaches open the door to the design of multi-substrate enzymes displaying tailored specificity for any biocatalytic application.

INTRODUÇÃO: O destreinamento físico está relacionado com alterações moleculares associadas à perda de massa muscular, rápido acréscimo da massa adiposa, ganho de peso e resistência à insulina. Estudos apontam que a restrição calórica reduz a gordura corporal, contudo, associada com a inatividade física, altera o metabolismo proteico acelerando o catabolismo muscular. Nesse sentido, estudos com suplementação de aminoácidos essenciais, em especial a leucina, observam aumento na síntese proteica e redução da degradação proteica em situações de restrição ou recuperação nutricional. Dessa forma sugere-se que a restrição calórica associada à suplementação com leucina poderia atenuar os efeitos desencadeados pelo destreinamento físico. OBJETIVO: Investigar a influência da suplementação crônica de leucina na via de sinalização da síntese proteica e degradação proteica no tecido muscular a partir de parâmetros moleculares em ratos destreinados, submetidos à restrição calórica. MÉTODOS: Foram utilizados 64 ratos Sprague-Dawley machos e adultos, inicialmente distribuídos em 2 grupos: Controle (CON) (n = 16) representados pelos animais sedentários, e Treinamento (TREIN) (n = 48) que foram submetidos ao treinamento em esteira ergométrica durante oito semanas. Após esse período, os animais foram redistribuído em 6 grupos: Sedentário (SED), Treinamento (TREIN), Destreinamento (DT), Destreinamento + Leucina (LEU), Destreinamento + Restrição Calórica (DTRC) e Destreinamento + Restrição Calórica + Leucina (DTRC + LEU). Foram analisados massa corporal, consumo da ração, composição corporal, sensibilidade a insulina bem como os marcadores de inflamação (IL-6; IL-10; MCP-1; TNF-α; 1L-1α; PAI-1; leptina; adponectina) e parâmetros moleculares como genes e proteínas envolvidas na via de sinalização da síntese protéica (mTOR, P-4EBP1, P-s6K1 e eIF4E); degradação proteica (MAFBx e MURF) além de transportadores de aminoácidos (LAT-1 e SNAT 2 e CD98). ESTATÍSTICA: Os valores foram expressos em média e desvio padrão. As comparações entre os grupos após o período de destreinamento físico foram avaliadas por meio de análise de variância (ANOVA), seguida do teste de Tukey. Em todas as análises foi considerado nível de significância de 5%. A análise estatística foi realizada no software SPSS versão 17.0. RESULTADOS: Em relação à composição corporal, foi observada diferença estatisticamente significativa na gordura corporal e massa livre de gordura entre os grupos DTRC e DTRC+LEU, em relação aos demais grupos experimentais. Porém não houve diferença estatística entre o DTRC e DTRC+LEU. No entanto não foi observada diferença estatisticamente significativa quando avaliado a proteína da carcaça. Em relação aos parâmetros moleculares, não foi observada diferença estatisticamente significativa entre os grupos, quando avaliada a expressão de proteínas relacionadas com a via de sinalização de síntese proteica (mTOR, P-4EBP1, P-s6K1 e eIF4E) e transportadores de leucina (LAT- 1;SNAT-2;CD(98). Quanto avaliada a expressão gênica da via de degradação, foi observada uma menor expressão do gene MURF quando suplementado com leucina, porém sem diferença estatisticamente significativa. CONCLUSÃO: A restrição calórica associada com a suplementação com leucina foi efetiva na redução da gordura corporal, e aumento da massa livre de gordura, porém não houve diferença estatisticamente significante entre os dois grupos DTRC e DTRC+LEU, tampouco quando avaliada a proteína da carcaça desses animais. Dessa forma, pode-se concluir que a suplementação crônica com leucina não reverteu os efeitos desencadeados pelo destreinamento físico, e, além disso, não foi suficiente para alterar os parâmetros moleculares envolvidos na via de sinalização de síntese e degradação proteica desses animais. / INTRODUCTION: Physical detraining is related to molecular changes associated with loss of muscle mass, rapid increase in fat mass, weight gain and insulin resistance. Studies show that caloric restriction reduces body fat; however, associated with physical inactivity, it alters protein metabolism accelerating muscle catabolism. Accordingly, studies with supplementation of essential amino acids, particularly leucine, observed increase in protein synthesis and reduced protein degradation in situation of nutritional restriction or recovery. Thus, it is suggested that caloric restriction associated with leucine supplementation could attenuate the effects triggered by physical detraining. OBJECTIVE: To investigate the influence of chronic leucine supplementation in the signaling pathway of protein synthesis and degradation in muscle tissue from molecular parameters in detrained rats, subjected to caloric restriction. METHODS: Sixty-four adult male and female Sprague-Dawley rats were used, initially divided into 2 groups: Control (CON) (n = 16) represented by sedentary animals, and Trained (TRAIN) (n = 48) who underwent treadmill training for eight weeks. After this period, the animals were re-distributed into 6 groups: Sedentary (SED), Trained (TRAIN), Detrained (DT), Detrained + Leucine (LEU), Detrained + Caloric Restriction (DTRC) and Detrained + Caloric Restriction + Leucine (DTRC + LEU). Body mass, food consumption, body composition, insulin sensitivity were analyzed, as well as inflammation markers (IL-6; IL-10; MCP-1; TNF-α; 1L-1α; PAI-1; leptin; adiponectin) and molecular parameters, such as genes and proteins involved in signaling pathways of protein synthesis (mTOR, P-4EBP1, P-s6K1 and eIF4E); protein degradation (MAFBx and MURF) and also amino acid transporters (LAT-1, SNAT 2 and CD98). STATISTICAL ANALYSIS: Values were expressed as mean and standard deviation. Analysis of variance (ANOVA) was used for comparisons between groups after physical detraining, followed by Tukey\'s test. A 5% significance level was considered in all analyses. Statistical analysis was performed using SPSS software, version 17.0. RESULTS: In relation to body composition, a statistically significant difference was observed in body fat and fat free mass between groups DTRC and DTRC+LEU, compared with other experimental groups. However, there was no statistical difference between groups DTRC and DTRC+LEU. Nevertheless, no statistically significant difference was found when carcass protein was assessed. In relation to molecular parameters, no statistically significant difference was observed between groups, when protein expression related to the signaling pathway of protein synthesis (mTOR, P-4EBP1, P-s6K1 and eIF4E) and leucine transporters (LAT-1;SNAT-2;CD(98) was assessed. When gene expression of the degradation pathway was investigated, a lower expression of gene MURF was found with leucine supplementation; however, this was not statistically different. CONCLUSION: Caloric restriction associated with leucine supplementation was effective in reducing body fat, and increasing fat free mass; however, no statistically significant difference was found between groups DTRC and DTRC+LEU, nor when carcass protein of these animals was assessed. Therefore, it was concluded that chronic leucine supplementation did not reverse the effects triggered by physical detraining and, in addition, it was not sufficient to change the molecular parameters involved in the signaling pathway of protein synthesis and degradation of these animals.

京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第21651号 / 医博第4457号 / 新制||医||1034(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 髙橋 良輔, 教授 伊達 洋至, 教授 松原 和夫 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM

Branched-chain amino acids (BCAA) are a group of essential amino acids consisting of leucine, isoleucine, and valine. Leucine, in particular, has signaling functions affecting protein and energy metabolism. Plasma leucine concentration is positively correlated with obesity and associated metabolic disorders. We set out to test the hypothesis that metabolic dysfunction from high fat diets precedes dysfunctional BCAA metabolism. First, BCAA were supplemented to neonatal pigs for 4 weeks to evaluate whether the anabolic signaling function of leucine could increase muscle growth when fed for a longer duration than in previous studies. Neither normal pigs nor low birth weight pigs, which have naturally impaired muscle growth, grew better in response to BCAA supplementation, despite low birth weight pigs expressing less of the leucine sensing protein Sestrin2 in skeletal muscle. Furthermore, high plasma BCAA concentrations caused by the experimental diets had no effect on adiposity, liver fat accumulation, or expression of genes related to fatty acid synthesis, mitochondrial biogenesis, or energy expenditure in the pigs' livers. Having produced strong evidence that long term BCAA supplementation neither improves lean growth nor causes abnormal fat metabolism, we then tested whether fat supplementation changes BCAA metabolism. Pigs were fed milk replacer formula with either low energy (Control), or high energy from long-chain fatty acids (LCFA) or medium-chain fatty acids (MCFA) for 22 days. Although high fat diets did not increase plasma BCAA concentrations, the MCFA diet in particular caused metabolic changes which could lead to fatty liver disease and decreased oxidative BCAA disposal. Expression of fatty acid synthesizing genes were increased in the livers of pigs fed MCFA formula compared to Control and LCFA formula. Oxidation of α-ketoisocaproic acid was decreased in liver homogenate of pigs fed MCFA and LCFA formulas compared to Control. Additionally, hepatic oxidation of α-ketoisovalerate was decreased, and plasma concentration of α-ketoisovalerate was consequently increased, in pigs fed MCFA formula compared to Control, with LCFA formula causing intermediate results. In future research, it would be valuable to feed high MCFA formula for a longer period of time to determine whether nonalcoholic fatty liver disease will develop, and whether plasma BCAA concentrations will increase due to decreased oxidation. Overall, these studies concluded that long term BCAA supplementation does not increase muscle growth in neonatal pigs, but there is also no indication that they cause obesity or dysfunctional fat metabolism. On the other hand, high fat diets cause impairments in BCAA catabolism which may precede elevated plasma BCAA concentrations. / Doctor of Philosophy / Branched-chain amino acids (BCAA) are essential amino acids which are abundant in plant and animal proteins. In addition, the BCAA leucine has functions in protein and energy metabolism. Leucine consumption induces a signal to build new muscle protein. However, leucine concentration is also higher in blood plasma of obese individuals than in non-obese individuals, which has caused uncertainty regarding the safety of leucine consumption. In order to demonstrate that leucine does not cause obesity, we set out to test the hypothesis that high fat diets cause decreased breakdown of BCAA. In the first study, we tested whether one month of BCAA supplementation could increase muscle growth in neonatal pigs. Neither normal pigs nor low birth weight pigs, which have naturally impaired muscle growth, grew better in response to BCAA supplementation, despite low birth weight pigs expressing less of a leucine sensing protein in skeletal muscle. Furthermore, BCAA supplementation caused higher BCAA concentrations in blood plasma, but did not cause pigs to gain more fat, or cause any changes in liver fat metabolism. Having produced strong evidence that BCAA supplementation neither improves lean growth nor causes abnormal fat metabolism, we then tested whether fat supplementation changes BCAA metabolism. Pigs were fed milk replacer formula which was either low calorie (Control), or high calorie from animal fat, which is rich in long-chain fatty acids (LCFA) or high calorie from coconut oil, which is rich in medium-chain fatty acids (MCFA). Although high fat diets did not increase blood plasma BCAA concentrations, the MCFA formula in particular caused changes which could lead to fatty liver disease and decreased breakdown of BCAA. Genes which synthesize new fatty acids were increased in the livers of pigs fed MCFA formula compared to those fed LCFA and Control formulas. Furthermore, liver samples taken from pigs fed the MCFA and LCFA formulas were less able to fully break down metabolites of leucine compared to pigs fed the Control formula. In addition, liver samples from MCFA fed pigs were less able to fully break down metabolites of the BCAA valine, which led to higher concentrations of that metabolite in the blood plasma of pigs fed MCFA formula compared to pigs fed LCFA or Control formula. In the future, it would be valuable to feed a high MCFA formula for a longer period of time to determine whether nonalcoholic fatty liver disease will develop, and whether blood plasma BCAA concentrations will increase due to decreased breakdown. Overall, these studies concluded that long term BCAA supplementation does not increase muscle growth in neonatal pigs, but there is also no indication that they cause obesity or dysfunctional fat metabolism. On the other hand, high fat diets cause impairments in BCAA breakdown which may lead to elevated BCAA concentrations in blood plasma.

Consumer awareness of the link between dietary fats and health outcomes has led to increased demand for food products enriched with bioactive fatty acids (FA). Ruminant-derived fats, such as dairy fats, contribute significantly to the American diet and contain many unique beneficial FA, such as short- and medium-chain FA, n-3 FA, conjugated linoleic acids (CLA), vaccenic acid (VA), as well as odd-and branched-chain FA (OBCFA). Increasing these FA in dairy products by altering farm management practices, such as breed, lactation stage, and nutrition, may improve human health without a change to the diet. The overarching goal of this dissertation was to evaluate on-farm strategies to increase the content of bioactive FA in bovine milk. The first objective was to enrich milk fat with bioactive FA via supplementation with echium oil, a terrestrial oil rich in n-3 FA. Treatments were 1.5% and 3.0% dry matter as lipid encapsulated echium oil (EEO) which were compared to a control (no EEO). Milk fat contents of n-3 FA increased with EEO supplementation but the transfer of n-3 FA from EEO into milk fat was rather low (< 5%). In a subsequent trial, ruminal protection of EEO and post-ruminal release of EEO-derived FA was examined. EEO-derived FA were preferentially incorporated into plasma lipid fractions unavailable to the mammary gland. Moreover, fecal excretion of EEO-derived FA ranged from 7-14% of intake, and VA and CLA, the biohydrogenation and metabolism products of n-3 FA, increased in milk and feces with EEO supplementation. Therefore, lipid-encapsulation provided inadequate digestibility and low transfer efficiency of n-3 FA into milk. The second objective was to compare the bacterial community structure and unique bioactive FA in bacterial membranes and milk fat between Holstein (HO), Jersey (JE), and HO x JE crossbreeds (CB) across a lactation. Lactation stage had a prominent effect on rumen bacterial taxa, with Firmicutes being most abundant during early lactation. The FA composition of bacterial cells was affected by both lactation stage and genetics, and OBCFA in bacterial cells were positively correlated with several bacteria of the Firmicutes phylum. HO and CB exhibited greater contents of various bioactive FA in milk than JE. The highest content of all bioactive FA occurred at early lactation, while OBCFA were highest at late lactation. The third objective was to determine the effects of grazing a monoculture vs. a diverse pasture on rumen bacterial and protozoal taxa, their membrane FA composition, and milk FA. Microbial communities shifted in response to grazing regime accompanied with changes in their membrane FA profiles. Rumen microbiota from cows grazing a diverse pasture had higher contents of n-3 FA and VA, but lower contents of OBCFA. Microbial membrane FA correlated with microbial taxa, the contents of ALA and n-3 FA were positively correlated with the bacterial genus Butyrivibrio and the protozoal genus Eudioplodinium. Milk contents of CLA and n-3 FA increased when cows grazed a diverse pasture, while grazing a monoculture led to greater milk contents of OBCFA. In conclusion, grazing cows on a diverse pasture, when compared to genetic effects and lipid supplementation, was the most efficacious strategy to increase the content of bioactive FA in milk.