Organisms have evolved a remarkable ability to mineralize complex skeletons and functional biomaterials. These structures are nucleated and grown in close associaiton with macromolecular assemblages of proteins and polysaccharides that are implicated in regulating all stagees of mineralization. Because of this intimate association of organic with inorgaic components, many studies have investigated the effects of particular organic species on mineral morphology, phase, and growth rate. However, the diversity and species-specific nature of the organic assemblages associated with biominerals across a wide variety of taxa, has limited our understanding of how organisms use biomolecules to regulate skeletal formation. It is clear that a mechanistic picture of biomolecular controls on mineralization requires molecular-level investigations of the interplay between organic and inorganic components at all stages of crystallizaiton. This dissertation presents the findings from theoretical and experimental studies of the physical mechanisms that underlie biomolecule controls on mineral formation. Molecular dynamics simulations probe the effects of acidic molecules on the hydration of alkaline earth cations. After first calculating baseline hydration properties for magnesium, calcium, strontium, and barium, I determine the effects of carboxylate-containing molecules on cation hydration state as well as the kinetics and thermodynamics of water exchange. Experimental work utilizes self-assembled monolayers as proxies for matrix macromolecules in order to understand their effects on CaCO3 nucleation kinetics and thermodynamics. Estimates of nucleation rates and barriers are made from optical microscopy data and correlated with measurements of crystal – substrate rupture force from dynamic force microscopy. These investigations show that an important function of biomolecules in directing mineralization lies in their ability to modulate cation hydration. Both chemical functionality and molecular conformation are influential in regulating the kinetics and thermodynamics of mineral nucleation, and these effects may be predicted by the strength of interaction between organic and inorganic components. These findings contribute to a mechanistic understanding of how organic matrices act to regulate biomineral formation. They demonstrate a plausible physical basis for how carboxyl-rich biomolecules accelerate the kinetics of biomineral growth and suggest roles for organic species in the nucleation and pre-nucleation stages of mineralization. / Ph. D.

The overall aim of this project was to study 'functionalised' calcium carbonates (FCCs) for use as a carrier for the controlled release of 'actives,' by permeation and diffusion, and is being proposed as an environmentally friendly and non-toxic pharmaceutical excipient, nutraceutical, and flavour carrier. The delivery of a drug to its target site in the appropriate amount and time-frame in order for it to have a controlled release effect whilst achieving the maximum therapeutic effect remains a topic of design and development for novel drug delivery systems. FCCs encompass a family of new pharmaceutical excipients in which the conditions of manufacture follow strict process regulations with respect to the grade of reagents that are employed and the microbiological environment under which they are produced, and include freedom from organic polymers. Adjustments to the FCC production process can be used to produce a wide range of different morphologies, and raise the possibility of tailoring the void structures of the particles to provide controlled release delivery vehicles for actives across many fields, including drugs and flavours. However, such tailoring can only be fully optimised by a fundamental characterisation of the way in which a drug, loaded into an FCC, then flows and diffuses out over a period of time to provide the delayed release. It was found that adsorption on the FCC surface is selective, for example, saccharin does not become adsorbed from 4-(2-hydroxyethyl)piperazine-1-ethanesulfonic acid (HEPES) buffer solution, and neither does anethole from ethanol. FCC also does not adsorb the cationic probe benzyltrimethylammonium bromide (BTMAB) or the anionic probe sodium 2-naphthalenesulphonate (Na2NS). However, it was found that vanillin adsorbs onto the FCC in an amount of 2.00 ± 0.59 mg g^-1. Aspirin and vanillin adsorption from ethanolic solutions with various additions of water onto FCC TP was investigated and fitted with the Tóth isotherm. It was estimated that vanillin adsorbed onto around 17 %, and aspirin onto around 39 %, of the overall FCC TP surface area without the addition of any water. An equation was formulated in order to approximate the adsorption as a function of the FCC's surface coverage by the water. This is discussed in Chapter 4 and has also been published in a peer-reviewed academic journal (Levy et al., 2017). Chapter 5 discusses the preliminary steps of the loading of vanillin and saccharin into FCC, and the results were inconclusive for a majority of samples, concluding that the loading and analysis methods need refining. The modelling of the diffusion profiles of vanillin loaded FCC S07 and S10 was successful, and resulted in diffusion coefficients of 231.9 x 10^-16 m^2 s^-1 and 248.44 x 10^-16 m^ s^-1, respectively. This is outlined in Chapter 6. Chapter 7 describes the 'zero length column' (ZLC) technique, which was used as a way to characterise the diffusivity of the intraparticle pores of each FCC grade. However, it was established that there are many experimental artefacts present with such a method. This work outlines the development of the novel 'finite length column' (FLC), which was developed as a means to overcome the limitations of the ZLC (Levy et al., 2015). Effective diffusivity coefficients in the long-term region of the diffusion curves of the FCC samples range from 1.06-106 x 10 ^-16 m ^2 s^-1. The FLC was then used in preliminary trials to dilute FCC with an inert solid in order to further refine the ZLC technique, and is discussed in Chapter 8. Two mathematical methods were also developed to aid in the refinement. The reported effective diffusivity coefficient for FCC 03 in the long-term region of the diffusion curve is 49.5 x 10^-16 m^2 s^-1. In conclusion, this work confirms that FCC has potential for use as a carrier for the controlled release of 'actives' by diffusion. The utilisation of mathematical modelling in conjunction with experimental methods in the study of drug release and delivery is steadily increasing due to its enormous future potential; it will enable the optimisation of novel dosage forms and the elucidation of release mechanisms at a major reduction in cost and time compared with the number of experimental studies required to do so.

Aquifers are an important storage location and source of fresh groundwater. They may become polluted by a number of contaminants including mobile divalent radionuclides such as strontium-90 which is a byproduct of uranium fission. A method for remediating such divalent radionuclides is sequestration through co-precipitation into calcium carbonate. Calcium carbonate precipitation occurs naturally but can be enhanced by the use of ureolytic microorganisms living within the aquifer. The microbial enzyme urease cleaves ammonia from urea (added as a stimulant to the aquifer) increasing the pH and subsequently pushing the bicarbonate equilibrium towards precipitation. Laboratory experimentation is necessary to better predict field scale outcomes of remediation that is driven by ureolytic calcium carbonate co-precipitation. To aid in such laboratory experiments, I constructed two ureolytic organisms which contain green fluorescent protein (GFP) so that the location of the microbes in relation to media flow paths and precipitation can be viewed by microscopy in a 2- dimensional porous medium flow cell reactor. The reactor was operated with a parallel flow regime where the two influent media would not promote microbially induced calcium carbonate precipitation until they were mixed in the flow cell. A demonstration study compared the results of parallel flow and mixing in the reactor operated with and without one of the GFP-containing ureolytic organisms. The growth and precipitation of calcium carbonate within the reactor pore space altered flow paths to promote a wider mixing zone and a more widely distributed overall calcium carbonate precipitation pattern. This study will allow optimization of remediation efforts of contaminants such as strontium-90 in aquifers. / Graduation date: 2012

The impact of particle size, size distribution, and particle shape on the rheology of precipitated calcium carbonate (PCC) based coatings was studied. Evaluating the interactions between different particle sizes and shapes leads to a better understanding of the packing fraction of PCC. HIgh packing fraction is desirable because of the positive impact on the fluidity of suspensions. Suspension with higher levels of fluidity can potentially load larger amounts of solids while keeping low viscosities. High solids suspensions are key factors to improve the efficiency of coating processes. To address this issue, PCC of different sizes and shapes where mixed in different ratiosto find mixtures with higher packing fractions that could result in coatings with lower viscosities. When coatings containing 90% of large particles and 10% by weight of small particles of different shape, viscosity decreases by 50% for one combination. The effect is caused by the higher packing fraction achieved. Future research is also described here.

Carbonate geochemistry plays an important role in understanding environmental conditions during the time of precipitation. The studies for this dissertation research were focused on carbonate precipitation and crystallization in different chemical and physical environments. The first project aimed to precipitate aragonite at low oxygen levels to identify a correlation between partitioning of trace elements and anoxic and suboxic conditions. The second study focused on the precipitation of amorphous calcium carbonate in varying magnesium concentrations to determine the identity of crystalline material after transformation of ACC. Lastly, the third project was developed to understand transformation of CaCO3 polymorphs. Specifically, whether or not geochemistry is retained from one polymorph to the next. All projects could aid in development of paleoproxies to be used for determining past environmental and climatic conditions in the past.

Thesis (PhD (Chemistry and Polymer Science))--Stellenbosch University, 2008. / Polysaccharides were modified with selected polymers via the grafting technique. Both anionic and cationic polysaccharides were prepared. Random and crosslinked graft copolymers were also prepared. The percentage grafting was determined by gravimetric analysis and results were confirmed by cross-polarization magic angle spinning carbon-13 nuclear magnetic resonance microscopy (CP/MAS 13C NMR). These modified biodegradable polymers were then used to flocculate precipitated calcium carbonate (PCC). The effects of pH, percentage grafting, crosslinker concentration and polysaccharide concentration on PCC flocculation were evaluated. Furthermore, the effects of anionic and cationic starch, either added to PCC sequentially or simultaneously, on PCC flocculation were also investigated. Generally, anionically modified starch showed excellent flocculation properties, which are desirable for the end application of PCC retention. The effect of polyacrylic acid (PAA) and polyacrylamide (PAM) modified cellulose fibers on calcium carbonate crystal nucleation and growth modification was investigated. When the heterogeneous crystallization of CaCO3 was carried out in the presence of modified cellulose fibers the CaCO3 crystals were found to be residing on the surface of the fibers. The morphologies of the crystallized CaCO3, polymorph and fiber surface coverage were different for cellulose materials grafted with polymers of different functionalities, meaning that there is interaction between the crystal growth modifier and the growing nuclei. The effect of the modified starch on the crystallization of calcium carbonate gave useful insight into designing CaCO3 filler morphologies. It was found that the filler size, morphology and surface properties of fillers can be tailor-made by choosing suitable CaCO3 crystallization conditions as well as a suitable crystal growth modifier. The crystallized CaCO3 had a negatively charged surface. Results of fluorescence studies showed that the PAA modified starch (polymeric additive used) resided on the surface of the crystals. Thus the presence of the polysaccharide on the surface of a filler could be advantageous for strengthening fiber–filler bonding in paper applications. Anionic starch materials were also used to prepare anionic-starch-coated starch particles. Both the anionic starch and anionic-starch-coated starch particles were evaluated for PCC retention and other properties of hand sheets. When anionic-starch-coated starch particles were used there was generally an improvement in the PCC retention, while the other paper properties remained desirable. The success achieved with the use of anionic-starch-coated starch particles now opens the way for the further preparation and testing of various modified starch particles, for optimization of filler retention.

Thesis (PhD (Chemistry and Polymer Science))--Stellenbosch University, 2008. / The synthesis of glycopolymers with various comonomers as prepared via the RAFT process is investigated. The macro-RAFT agent poly(3-O-methacryloyl-1,2:5,6-di-O-isopropylidene-D-glucofuranose) (PMAlpGlc) was prepared by polymerization of the glycomonomer with cumyl phenyl dithioacetate as the chain transfer agent. Chain extension with styrene or methyl acrylate or acrylic acid afforded novel diblock copolymers, (PMAlGlc-b-poly[styrene] or PMAGlc-b-poly[methyl acrylate] or PMAlGlc-b-poly[acrylic acid]), with predetermined molecular weights and narrow molecular weight distributions. The poly(acrylic acid) based glycopolymer was used to modify the surface of CaCO3, forming what will be referred to as a ‘sugar-coated CaCO3’ particle. This surface modifying effect was evaluated in depth; a schematic study of the effect of reaction temperature, pH, reaction time and glycopolymer concentration on CaCO3 crystallization was carried out. The analytical techniques Thermal Gravimetric Analysis (TGA) and Scanning Electron Microscopy (SEM) were used to verify that these ‘sugar-coated CaCO3’ particles have an increased adherence to cellulose compared to ‘non sugar-coated’ particles. A series of polymer configurations comprising various ratios of glycomoiety to poly(acrylic acid) was prepared. The effect of this polymer series on CaCO3 crystallization was evaluated and the ideal polymer configuration and its optimum synthesis conditions (i.e. reaction pH, temperature, time and polymer concentration) that gave maximum adherence of the ‘sugar-coated CaCO3’ particle onto cellulose were identified. The ability of these poly(acrylic acid) based glycopolymers to increase the interaction between CaCO3 and cellulose was then evaluated. This was done by simply mixing all three substrates, i.e. glycopolymer, cellulose and CaCO3 together. Analysis by TGA, SEM and Thin Layer Chromatography (TLC) revealed both the ideal polymer configuration that favoured increased adherence of the CaCO3 to cellulose and the optimum reaction conditions required for application and testing. In addition to studying the interaction between cellulose and CaCO3, the amphiphilic nature of the glycopolymers was determined. Transmission Electron Microscopy (TEM) confirmed that coreshell particles were prepared and that these particles are solvent exchangeable (in the case of styrene and methyl acrylate glyco-blocks) or pH exchangeable (in the case of acrylic acid glyco-blocks).

During the production of paper in paper mills, detrimental wood resin is released into the water circuit of the mill during the pulping process of the wood into fibres. This wood resin, termed pitch, can detrimentally deposit on the paper and on the paper machine equipment. The deposits mark the paper or can lead to a tear of the paper web involving a loss of output and a reduction in paper quality. Furthermore, the wood resinous compounds in paper mill effluents need to be reduced in order to minimise their toxic effects on water organisms. Talc has been the benchmark for many years as a mineral additive in pitch control. Since the papermaking process has changed over the years, the concept of mineral addition needs to be redefined and adopted towards the new circumstances. By understanding the fundamentals behind the adsorption of wood resin compounds from aqueous systems on to talc new mineral additives can be developed. A model for the determination of the aspect ratio of platy and rod-like particles has been developed, based on commonly available characterisations such as particle size, specific surface area and shape. It was found that the adsorption capacity of a mineral is directly proportional to its specific surface area, but only within its mineral family. Including the effect of surface hydrophilicity and hydrophobicity allowed fine tuning of the adsorption capacity of newly developed calcium carbonate grades. Furthermore, size exclusion effects, in porous, high surface area modified calcium carbonate, were seen to hinder complete coverage of the surface area by wood resin. With increasing pH, the adsorption efficiency of talc for colloidal wood resin was found to decrease. Under these alkaline conditions, which are common in modern paper making processes, talc preferentially adsorbed dissolved species. The use of the newly developed surface treated and modified calcium carbonates allowed more efficient adsorption of the colloidal fraction and, therefore, represent an efficient alternative to talc in pitch control. An increase in temperature led to an increased adsorption capacity of talc. This observation indicates the type of interaction tat controls the adsorption of hydrophobic pitch particles onto talc, i.e. the entropically favoured release of water from the hydrophobic talc surface as well as the hydrophobic methylene backbone of the hemicellulose.

Desalination is a technique of producing fresh water from the saline water. Industrial desalination of sea water is becoming an essential part in providing sustainable source of fresh water for a large number of countries around the world. Thermal process being the oldest and most dominating for large scale production of freshwater in today's world. Multi-Stage Flash (MSF) distillation process has been used for many years and is now the largest sector in the desalination industry. In this work, a steady state mathematical model of Multistage Flash (MSF) desalination process is developed and validated against the results reported in the literature using gPROMS software. The model is then used for further investigation. First, a steady state calcium carbonate fouling resistance model has been developed and implemented in the full MSF mathematical model developed above using gPROMS modeling tool. This model takes into consideration the effect of stage temperature on the calcium carbonate fouling resistance in the flashing chambers in the heat recovery section, heat rejection section, and brine heaters of MSF desalination plants. The effect of seasonal variation of seawater temperature and top brine temperature on the calcium carbonate fouling resistance has been studied throughout the flashing stage. In addition, the total annual operating cost of the MSF process is selected to minimise, while optimising the operating parameters such as seawater rejected flow rate, brine recycle flow rate and steam temperature at different seawater temperature and fouling resistance. Secondly, an intermediate storage between the plant and the client is considered to provide additional flexibility in design and operation of the MSF process throughout the day. A simple polynomial based dynamic seawater temperature and different freshwater demand correlations are developed based on actual data. For different number of flash stages, operating parameters such as seawater rejected flow rate and brine recycle flow rate are optimised, while the total annual operating cost of the MSF process is selected to minimise.The results clearly show that the advantage of using the intermediate storage tank adds flexible scheduling in the MSF plant design and operation parameters to meet the variation in freshwater demand with varying seawater temperatures without interrupting or fully shutting down the plant at any time during the day by adjusting the number of stages. Furthermore, the effect of non-condensable gases (NCG) on the steady state mathematical model of MSF process is developed and implemented in the MSF model developed earlier. Then the model is used to study effect of NCG on the overall heat transfer coefficient. The simulation results showed a decrease in the overall heat transfer coefficient values as NCG concentrations increased. The model is then used to study the effect of NCG on the design and operation parameters of MSF process for fixed water demand. For a given plant configuration (fixed design) and at different seawater and steam temperatures, a 0.015 wt. % of NCG results in significantly different plant operations when compared with those obtained without the presence of NCG. Finally, for fixed water demand and in the presence of 0.015 wt. % NCGs, the performance is evaluated for different plant configurations and seawater temperature and compared with those obtained without the presence of NCG.

Lime is one of the largest manufactured chemicals in the United States. The conversion of calcium carbonate into calcium oxide is an endothermic reaction and requires approximately two to four times the theoretical quantity of energy predicted from thermodynamic analysis. With the skyrocketing costs of fossil fuels, how to decrease the energy consumption in the calcination process has become a very important problem in the lime industry. In the present study, many chemicals including lithium carbonate, sodium carbonate, potassium carbonate, lithium chloride, magnesium chloride, and calcium chloride have been proved to be the catalysts to enhance the calcination rate of calcium carbonate. By mixing these chemicals with pure calcium carbonate, these additives can increase the calcination rate of calcium carbonate at constant temperatures; also, they can complete the calcination of calcium carbonate at relatively low temperatures. As a result, the energy required for the calcination of calcium carbonate can be decreased. The present study has aimed at developing a physical model, which is called the extended shell model, to explain the results of the catalytic calcination. In this model, heat transfer and mass transfer are two main factors used to predict the calcination rate of calcium carbonate. By using the extended shell model, not only the catalytic calcination but also the inhibitive calcination of calcium carbonate have been explained.