Rice starch contains two types of glucose polymers, mainly linear amylose and hyper-branched amylopectin. Waxy rice has been characterised by the lack of amylose, the proportion of which being one of the most important parameters measured for rice quality. Germplasm collection work conducted in the Lao People’s Democratic Republic has previously demonstrated the diversity of this type of rice in terms of quality. The definition of a waxy rice variety is dependent on the meaning of amylose. The conventional method for determining amylose content has shown that waxy rice could have up to 5% amylose. However, including a 0% amylose standard in the standard curve causes the amylose content of these varieties to become 0-2%. In this work, the absence of amylose in waxy rice has been determined through three different approaches. Granule-bound starch synthase I (GBSS1), the enzyme which synthesises amylose, was not detected in waxy rice. Long linear chains associated with amylose were also not detected by size exclusion chromatography (SEC). The absence of these long chains affected functional properties of waxy rice, as indicated by the differences in viscosity curves between waxy and non-waxy rice. Moreover, these waxy varieties themselves exhibit differences in their viscosity curves, another indication of the diversity in coking properties in these varieties. A new approach, the ‘lnP(N) technique’, in analysing chain length distributions was applied to varieties with known mutations in two of the enzymes involved in the synthesis of amylopectin, and in determining gelatinisation temperature. It was determined that the presence of a novel feature, an interruption to linearity at DP 18-24, of the lnP(N) plot was found in rice samples with mutations in the alk gene, which codes for starch synthase (SS) IIa, and in samples with inactive branching enzyme (BE) IIb. Single nucleotide polymorphisms (SNPs) in the gene coding for SSIIa have been associated with lowered gelatinisation temperature. On the other hand, non-functionality of BEIIb changes the amylopectin structure such that gelatinisation temperature is increased. The novel feature of the lnP(N) plot is found when either or both SSIIa and BEIIb are non-functional. Waxy rice starch has hot-water-soluble (HWS) and insoluble (HWI) components. It has been confirmed that the soluble polysaccharides are structurally different from phytoglycogen, and are similar to amylopectin. Structural differences between the two fractions, which can account for their differences in solubility, were determined. At the level of the chain length distribution, the HWI fraction contained long chains not found in the HWS fraction. Considerable amounts of sucrose and glucose were found in the HWS fraction. At another level of structure, the degree of branching of the HWS components was higher than in the HWI fraction. On the other hand, the whole molecules of the HWS fraction were smaller than those of the HWI fraction. These structural differences between the two fractions potentially affected their physical behaviour, particularly solubility. The amount of leached material appears to be a property of the method, as varying cooking conditions changed the amount of HWS components. This amount reaches equilibrium at certain conditions, indicating the limited amount of the HWS material. On the other hand, the HWI component contains molecules that are insoluble in water, rather than molecules that solubilise slowly. Given the stability of the HWS fraction in solution, the ratio of the HWS fraction to the HWI fraction could potentially be used in measuring quality if the amount of the HWS fraction is variety-specific. However, the quantity of the HWS fraction appears to be a feature of the starch, rather than of the variety. Nevertheless, the fact that the soluble fraction is structurally and thermodynamically different from the insoluble fraction could presumably be grounds to classify the soluble component as a group of molecules distinct from amylopectin.

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Master of Science / Department of Biology / Keith B. Gido / Nonnative species represent a major threat to the continued persistence of native fishes globally, especially in the Colorado River Basin of western North America, where there are now more nonnative than native fishes. In the upper Gila River, a tributary of the Colorado, numerous nonnative fishes have established populations, and predation by these nonnatives has been linked to extirpation of native fishes under low-flow conditions at some locations. Historically, the upper Gila lacked a top piscivore, and it is unclear what mechanisms have allowed the establishment of nonnative piscivores and resultant extension in food chain length. To investigate the phenomenon of increased food chain length through nonnative introductions we explored the influence of autochthonous energy availability on nonnative predator abundance, food chain length, and abundance of other trophic levels. Predictions were that increased basal energy availability would lead to increased nonnative predator abundance and thus increased food chain length, based upon predictions from food web theory. Annual production and biomass of four trophic levels measured across six longitudinally-positioned sites were calculated between June 2008 and June 2009 to test these predictions. In addition, energy demand of trophic levels relative to energy supply was compared across sites using a quantitative food web approach, to evaluate energy limitation across trophic levels. Primary production was found to vary considerably across the upper Gila (1,677-16,276 kcal m-2 yr-1), but production and biomass of other trophic levels was not related to this gradient as predicted. In addition, food chain length demonstrated a marginally-significant negative relationship with primary production (R[superscript]2=0.42, d.f.=5, p=0.16), which was in contrast with predicted responses. These results suggest that energy availability does not appear to be a limiting factor to the production or biomass of consumers. The influence of other mechanisms on food chain length in the upper Gila River, in particular disturbance frequency and intensity, deserve further investigation.

Amphiphiles that possess a dual character, hydrophobic and hydrophilic, are employed in many chemical, pharmaceutical and biological applications. Amphiphile molecules that include a hydrophilic head and a hydrophobic tail can easily adsorb at a liquid/vapour interface, to reach to a minimum free energy and hence a most thermodynamically stable state. Surface tension is a key parameter for understanding such behavior of an amphiphile, or a surfactant. This thesis represents a comprehensive study on adsorption and surface tension of slightly volatile, organic amphiphiles in aqueous solution. Although for a vapor-liquid interface, adsorption from both liquid and vapor phases should be considered, they have been almost always considered exclusive of one another. When a volatile surfactant is dissolved in the liquid phase, it also applies a finite partial pressure in the vapor phase. Recently, dynamic surface tension experiments showed that adsorption from both sides of a vapor/liquid interface must be studied simultaneously. It is noted that surface tension phenomena are often dynamic, in particular when the surface under consideration is perturbed. With the newly discovered importance of adsorption from both sides of a vapor/liquid interface, one may have to ask the question: how dynamic surface tension is influenced and responding to the surface perturbation and environment changes, and whether both sides of the interface play a role in surface tension responses. In this research, axisymmetric drop shape analysis-profile (ADSA-P) is used for surface tension measurement. The experiments are performed in a closed chamber where the effects of surfactant concentrations of both liquid and vapor phases on the surface tension can be studied. The partial vapor pressure of surfactant is controlled with an environment solution containing the same surfactant as the sample solution. The environment solution is to facilitate adsorption from the vapor side of the interface by creating a surfactant vapor phase. The effects of surface perturbation, environment condition (i.e., temperature and pressure) and carbon chain length on the surface tension and adsorption kinetics are studied in detail. The surface tension response of 1-octanol aqueous solution to surface area perturbation is investigated. Upon surface compression, the surface tension decreases followed by a gradual increase back to the value prior to compression. On surface expansion, two categories of surface tension response are observed: First, when the change in surface area is smaller than 5%, the behavior similar to that of conventional surfactants is observed. The surface tension increases followed by a gradual decrease back to the value prior to expansion. Second, when the change in surface area is greater than 5%, and the drop concentration is sufficiently larger than the environment concentration, the surface tension initially slightly increases, but after a time delay, it sharply decreases, followed by a gradual increase back to the value prior to expansion. Previous studies showed that at steady-state condition a network of hydrogen bonding between surfactant and water molecules near the surface is created. The unique surface tension response after large expansion might be related to the momentarily destruction of this hydrogen bonding network and gradually making a new one. The effect of temperature on the surface tension and adsorption kinetics of 1-octanol, 1-hexanol and 1-butanol aqueous solutions is studied. The steady-state surface tension is found to decrease upon an increase in temperature, and a linear relationship is observed between them. The modified Langmuir equation of state and the modified kinetic transfer equation are used to model the experimental data of the steady-state and dynamic (time-dependent) surface tension, respectively. The equilibrium constants and adsorption rate constants are evaluated through a minimization procedure for temperatures ranging from 10°C to 35°C. From the steady-state modelling, the equilibrium constants for adsorption from vapor phase and liquid phase are found to increase with temperature. From the dynamic modelling, the adsorption rate constants for adsorption from vapor phase and liquid phase are found to increase with temperature too. The influence of carbon dioxide pressure on the surface tension and adsorption kinetics of the aforementioned surfactant aqueous solutions is investigated. To consider the effect of adsorption/desorption of the two species (surfactant and carbon dioxide) from both sides of a vapor/liquid interface on the surface tension, the modified Langmuir equation of state and the modified kinetic transfer equation are derived. The steady-state and dynamic surface tension data are modelled using the modified Langmuir equation of state and the modified kinetic transfer equation, respectively. The equilibrium constants and adsorption rate constants of surfactant and carbon dioxide are evaluated through a minimization procedure for CO2 pressures ranging from 0 to 690 KPa. From the steady-state modelling, the equilibrium parameters for surfactant and carbon dioxide adsorption from vapor phase and liquid phase are found unchanged for different pressures of carbon dioxide. From the dynamic modelling, the adsorption rate constants for surfactant and carbon dioxide are found to decrease with carbon dioxide pressure. The role of carbon chain length of amphiphiles in aqueous solution is also studied. It is illustrated that the equilibrium constants for adsorption from both sides of a vapor/liquid interface increase from 1-butanol to 1-octanol. The modelling results show that the ratio of the equilibrium constant for adsorption from vapor phase to the equilibrium constant for adsorption from liquid phase declines from 260 to 26 as the chain length is increased from 1-butanol to 1-octanol. Therefore, the contribution to adsorption from liquid phase augments as the chain length is increased. The adsorption kinetics for this group of short carbon chain surfactants is modelled using a kinetic transfer equation. The modelling results show that the adsorption rate constants from vapor phase and liquid phase (kag and kal) increase from 1-butanol to 1-octanol. Steady-state and dynamic modelling also reveals that the maximum surface concentration increases with carbon chain length. These results may be due to the higher hydrophobicity character of a surfactant molecule at longer carbon chain length.

Amphiphiles that possess a dual character, hydrophobic and hydrophilic, are employed in many chemical, pharmaceutical and biological applications. Amphiphile molecules that include a hydrophilic head and a hydrophobic tail can easily adsorb at a liquid/vapour interface, to reach to a minimum free energy and hence a most thermodynamically stable state. Surface tension is a key parameter for understanding such behavior of an amphiphile, or a surfactant. This thesis represents a comprehensive study on adsorption and surface tension of slightly volatile, organic amphiphiles in aqueous solution. Although for a vapor-liquid interface, adsorption from both liquid and vapor phases should be considered, they have been almost always considered exclusive of one another. When a volatile surfactant is dissolved in the liquid phase, it also applies a finite partial pressure in the vapor phase. Recently, dynamic surface tension experiments showed that adsorption from both sides of a vapor/liquid interface must be studied simultaneously. It is noted that surface tension phenomena are often dynamic, in particular when the surface under consideration is perturbed. With the newly discovered importance of adsorption from both sides of a vapor/liquid interface, one may have to ask the question: how dynamic surface tension is influenced and responding to the surface perturbation and environment changes, and whether both sides of the interface play a role in surface tension responses. In this research, axisymmetric drop shape analysis-profile (ADSA-P) is used for surface tension measurement. The experiments are performed in a closed chamber where the effects of surfactant concentrations of both liquid and vapor phases on the surface tension can be studied. The partial vapor pressure of surfactant is controlled with an environment solution containing the same surfactant as the sample solution. The environment solution is to facilitate adsorption from the vapor side of the interface by creating a surfactant vapor phase. The effects of surface perturbation, environment condition (i.e., temperature and pressure) and carbon chain length on the surface tension and adsorption kinetics are studied in detail. The surface tension response of 1-octanol aqueous solution to surface area perturbation is investigated. Upon surface compression, the surface tension decreases followed by a gradual increase back to the value prior to compression. On surface expansion, two categories of surface tension response are observed: First, when the change in surface area is smaller than 5%, the behavior similar to that of conventional surfactants is observed. The surface tension increases followed by a gradual decrease back to the value prior to expansion. Second, when the change in surface area is greater than 5%, and the drop concentration is sufficiently larger than the environment concentration, the surface tension initially slightly increases, but after a time delay, it sharply decreases, followed by a gradual increase back to the value prior to expansion. Previous studies showed that at steady-state condition a network of hydrogen bonding between surfactant and water molecules near the surface is created. The unique surface tension response after large expansion might be related to the momentarily destruction of this hydrogen bonding network and gradually making a new one. The effect of temperature on the surface tension and adsorption kinetics of 1-octanol, 1-hexanol and 1-butanol aqueous solutions is studied. The steady-state surface tension is found to decrease upon an increase in temperature, and a linear relationship is observed between them. The modified Langmuir equation of state and the modified kinetic transfer equation are used to model the experimental data of the steady-state and dynamic (time-dependent) surface tension, respectively. The equilibrium constants and adsorption rate constants are evaluated through a minimization procedure for temperatures ranging from 10°C to 35°C. From the steady-state modelling, the equilibrium constants for adsorption from vapor phase and liquid phase are found to increase with temperature. From the dynamic modelling, the adsorption rate constants for adsorption from vapor phase and liquid phase are found to increase with temperature too. The influence of carbon dioxide pressure on the surface tension and adsorption kinetics of the aforementioned surfactant aqueous solutions is investigated. To consider the effect of adsorption/desorption of the two species (surfactant and carbon dioxide) from both sides of a vapor/liquid interface on the surface tension, the modified Langmuir equation of state and the modified kinetic transfer equation are derived. The steady-state and dynamic surface tension data are modelled using the modified Langmuir equation of state and the modified kinetic transfer equation, respectively. The equilibrium constants and adsorption rate constants of surfactant and carbon dioxide are evaluated through a minimization procedure for CO2 pressures ranging from 0 to 690 KPa. From the steady-state modelling, the equilibrium parameters for surfactant and carbon dioxide adsorption from vapor phase and liquid phase are found unchanged for different pressures of carbon dioxide. From the dynamic modelling, the adsorption rate constants for surfactant and carbon dioxide are found to decrease with carbon dioxide pressure. The role of carbon chain length of amphiphiles in aqueous solution is also studied. It is illustrated that the equilibrium constants for adsorption from both sides of a vapor/liquid interface increase from 1-butanol to 1-octanol. The modelling results show that the ratio of the equilibrium constant for adsorption from vapor phase to the equilibrium constant for adsorption from liquid phase declines from 260 to 26 as the chain length is increased from 1-butanol to 1-octanol. Therefore, the contribution to adsorption from liquid phase augments as the chain length is increased. The adsorption kinetics for this group of short carbon chain surfactants is modelled using a kinetic transfer equation. The modelling results show that the adsorption rate constants from vapor phase and liquid phase (kag and kal) increase from 1-butanol to 1-octanol. Steady-state and dynamic modelling also reveals that the maximum surface concentration increases with carbon chain length. These results may be due to the higher hydrophobicity character of a surfactant molecule at longer carbon chain length.

No description available.

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No description available.