Spelling suggestions: "subject:"characterisation,"" "subject:"haracterisation,""
171 |
Removal of organic micropollutants and trace metal from water using modified activated carbonsChingombe, Purazen January 2006 (has links)
Pollution of water by herbicides and heavy metals has caused world wide concern because of the adverse effects of these pollutants on the environment, humans and wildlife. This has resulted in tighter legislation being imposed on the levels of these pollutants in drinking water. For example, the European Union (EU) has set the legislation in the drinking water Directive Admissible Concentration for a single herbicide to a maximum of 0.1 ppb. Despite the tight environmental pollution controls, isolated cases of pollutants exceeding their limits are still encountered. This would suggest that research towards the efficient and effective removal of these pollutants will be an on-going process. In this study, sorption of copper and some selected herbicides e.g. atrazine, benazolin and 2,4-dichlorophenoxyacetic acid (2,4-D) was undertaken on a conventional activated carbon and its modified series. A low level detection method was developed using High Performance Liquid Chromatography (HPLC) and this system was used to quantify the sorption capacity of the herbicides. In order to understand the sorption mechanism of the targeted pollutants, physical and chemical characterisation of the adsorbents was undertaken using a variety of techniques. These include, Scanning Electron Microscopy (SEM), X-ray Photoelectron Spectroscopy (XPS), Fourier Transform Infrared (FT-IR) method, pore size distribution and surface area measurements, elemental analysis, sodium capacity determination, zeta potential and pH titration. The sorption data were presented and analysed by conventional adsorption isotherms. Sorption of the herbicides was favoured on carbon samples with least oxygen content while the uptake of copper was strongest in oxidised carbons. Kinetic experimental data were analysed by a pseudo second order model and the Boyd kinetic model. Molecular structural configurations and the physico-chemical properties of the adsorbent played a crucial role in the sorption behaviour of the herbicides.
|
172 |
Characterising delamination in composite materials : a combined genetic algorithm - finite element approachMaranon, Alejandro January 2004 (has links)
A novel delamination identification technique based on a low-population genetic algorithm for the quantitative characterisation of a single delamination in composite laminated panels is developed, and validated experimentally The damage identification method is formulated as an inverse problem through which system parameters are identified. The input of the inverse problem, the central geometric moments (CGM), is calculated from the surface out-of-plane displacements measurements of a delaminated panel obtained from Digital Speckle Pattern Interferometry (DSPI). The output parameters, the planar location, size and depth of the flaw, are the solution to the inverse problem to characterise an idealised elliptical flaw. The inverse problem is then reduced to an optimisation problem where the objective function is defined as the L2 norm of the difference between the CGM obtained from a finite element (FE) model with a trial delamination and the moments computed from the DSPI measurements. The optimum crack parameters are found by minimising the objective function through the use of a low-population real-coded genetic algorithm (LARGA). DSPI measurements of ten delaminated T700/LTM-45EL carbon/epoxy laminate panels with embedded delaminations are used to validate the methodology presented in this thesis.
|
173 |
Analysing E-mail Text Authorship for Forensic PurposesCorney, Malcolm W. January 2003 (has links)
E-mail has become the most popular Internet application and with its rise in use has come an inevitable increase in the use of e-mail for criminal purposes. It is possible for an e-mail message to be sent anonymously or through spoofed servers. Computer forensics analysts need a tool that can be used to identify the author of such e-mail messages.
This thesis describes the development of such a tool using techniques from the fields of stylometry and machine learning. An author's style can be reduced to a pattern by making measurements of various stylometric features from the text. E-mail messages also contain macro-structural features that can be measured. These features together can be used with the Support Vector Machine learning algorithm to classify or attribute authorship of e-mail messages to an author providing a suitable sample of messages is available for comparison.
In an investigation, the set of authors may need to be reduced from an initial large list of possible suspects. This research has trialled authorship characterisation based on sociolinguistic cohorts, such as gender and language background, as a technique for profiling the anonymous message so that the suspect list can be reduced.
|
174 |
Managing the interdisciplinary requirements of 3D geological models.Riordan, Sarah J. January 2009 (has links)
Despite increasing computer power, the requirement to upscale 3D geological models for dynamic reservoir simulation purposes is likely to remain in many commercial environments. This study established that there is a relationship between sandbody size, cell size and changes to predictions of reservoir production as grids are upscaled. The concept of a cell width to sandbody width ratio (CSWR) was developed to allow the comparison of changes in reservoir performance as grids are upscaled. A case study of the Flounder Field in the Gippsland Basin resulted in the interpretation of three depositional environments in the intra-Latrobe reservoir interval. The sandbody dimensions associated with these depositional environments were used to build a series of 3D geological models. These were upscaled vertically and horizontally to numerous grid cell sizes. Results from over 1400 dynamic models indicate that if the CSWR is kept below 0.3 there will be a strong correlation between the average production from the upscaled grids compared to those of a much finer grid, and there will be less than 10% variation in average total field production. If the CSWR is between 0.3 and 1, there could be up to 30% difference, and once the CSWR exceeds 1.0 there is only a weak relationship between the results from upscaled grids and those of finer grids. As grids are upscaled the morphology of bodies in facies models changes, the distribution of petrophysical properties is attenuated and the structure is smoothed. All these factors result in a simplification of the fluid flow pathways through a model. Significant loss of morphology occurs when cells are upscaled to more than a half the width of the reservoir body being modelled. A simple rule of thumb is established — if the geological features of a model cannot be recognised when looking at a layer in the upscaled grid, the properties of the upscaled grid are unlikely to be similar to those of the original grid and the predictions of dynamic models may vary significantly from those of a finer grid. This understanding of the influence of sandbody size on the behaviour of upscaled dynamic models can be used in the planning stages of a reservoir modelling project. Two simple charts have been created. The first chart is for calculating the approximate number of cells in a model before it is built. The second chart is for comparing the proposed cell size against the CWSR, so that the predicted discrepancy between the ultimate production from the upscaled grid and one with much smaller cells can be assessed. These two charts enhance discussion between all interested disciplines regarding the potential dimensions of both static and upscaled dynamic models during the planning stage of a modelling project, and how that may influence the results of dynamic modelling. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1375309 / Thesis (Ph.D.) - University of Adelaide, Australian School of Petroleum, 2009
|
175 |
Managing the interdisciplinary requirements of 3D geological models.Riordan, Sarah J. January 2009 (has links)
Despite increasing computer power, the requirement to upscale 3D geological models for dynamic reservoir simulation purposes is likely to remain in many commercial environments. This study established that there is a relationship between sandbody size, cell size and changes to predictions of reservoir production as grids are upscaled. The concept of a cell width to sandbody width ratio (CSWR) was developed to allow the comparison of changes in reservoir performance as grids are upscaled. A case study of the Flounder Field in the Gippsland Basin resulted in the interpretation of three depositional environments in the intra-Latrobe reservoir interval. The sandbody dimensions associated with these depositional environments were used to build a series of 3D geological models. These were upscaled vertically and horizontally to numerous grid cell sizes. Results from over 1400 dynamic models indicate that if the CSWR is kept below 0.3 there will be a strong correlation between the average production from the upscaled grids compared to those of a much finer grid, and there will be less than 10% variation in average total field production. If the CSWR is between 0.3 and 1, there could be up to 30% difference, and once the CSWR exceeds 1.0 there is only a weak relationship between the results from upscaled grids and those of finer grids. As grids are upscaled the morphology of bodies in facies models changes, the distribution of petrophysical properties is attenuated and the structure is smoothed. All these factors result in a simplification of the fluid flow pathways through a model. Significant loss of morphology occurs when cells are upscaled to more than a half the width of the reservoir body being modelled. A simple rule of thumb is established — if the geological features of a model cannot be recognised when looking at a layer in the upscaled grid, the properties of the upscaled grid are unlikely to be similar to those of the original grid and the predictions of dynamic models may vary significantly from those of a finer grid. This understanding of the influence of sandbody size on the behaviour of upscaled dynamic models can be used in the planning stages of a reservoir modelling project. Two simple charts have been created. The first chart is for calculating the approximate number of cells in a model before it is built. The second chart is for comparing the proposed cell size against the CWSR, so that the predicted discrepancy between the ultimate production from the upscaled grid and one with much smaller cells can be assessed. These two charts enhance discussion between all interested disciplines regarding the potential dimensions of both static and upscaled dynamic models during the planning stage of a modelling project, and how that may influence the results of dynamic modelling. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1375309 / Thesis (Ph.D.) - University of Adelaide, Australian School of Petroleum, 2009
|
176 |
Isolation and characterisation of P450 gene(s) in barley (Hordeum vulgare)Nguyen, Linh Unknown Date (has links)
In plants, P450 enzymes encoded by P450 genes play a central role in numerous biosynthetic pathways, such as the production of secondary metabolites, stress responses and disease resistance. This thesis reports upon the utilization of molecular biology techniques to study P450 gene(s) in barley (Hordeum vulgare L.).Using several combinations of degenerate primers, a large number of barley P450 gene fragments were cloned and sequenced from two commercial varieties, Chebec and Harrington. Among 247 isolated sequences, twenty six percent were homologous to genes of known function. The abundance of these sequences differed between the two cultivars. Variations in the motif sequences of the cloned genes were also found between these two cultivars. In addition to the cloned fragments, twenty-two putative barley P450 encoding genes were identified from 24,000 cereal sequences in the International Triticeae EST Cooperative (ITEC) database by homology search. Among these Expressed Sequence Tag (EST) sequences, a full-length P450 sequence was selected for further investigation in this study.This novel P450 gene, CYP72A39, was expressed at a very early vegetative stage, but no expression was detected at the reproductive stage. Comparison of expression profiles of this gene and “digital expression” databases confirmed that this gene was homologous to several cereal EST clones with tissue-specific transcripts responding to various environmental stimuli, such as stresses and disease. Among these, many transcripts in barley were obtained from stressed tissues at the vegetative stage, and two transcripts in wheat (Triticum aestivum L.) were expressed after being challenged by barley powdery mildew pathogen (Blumeria graminis f. sp. hordei L.). This suggested that CYP72A39 may play a defence role in the barley seedling.The secondary structure of CYP72A39 was investigated in a comparative analysis using a computational approach. However, attempts to express CYP72A39 in a heterologous system and functional assays of the native protein in barley did not give decisive results, due to the disordered structure of the native protein and limitations of the current method. Screening the 3’ UnTranslated Region (3’UTR) of this gene in 158 genotypes of domesticated, landrace and wild barley revealed two haplotypes, which differed by a 12 base indel positioned between two transversions. The presence of both haplotypes in wild and cultivated barley suggests this polymorphism predates the domestication of barley. This indel was mapped to the long arm of chromosome 6H, less than 10 centi-Morgans (cM) from the gene encoding resistance to powdery mildew in barley (B. graminis). A comparison between haplotype diversity and powdery mildew resistance data for over 102 genotypes showed a weak link between the ‘long’ haplotype and resistance, while the ‘short’ haplotype was associated with susceptibility. There was no evidence for a strong correlation between haplotype and quality type (malt or feed); however, more malting varieties had the long haplotype, suggesting a possible association with some attributes in modern malting barley. There was no evidence for association with other characteristics such as geographic origin, growth habit or row number. Phylogenetic relationship of the CYP72A39 to other CYP72 members was also investigated.
|
177 |
Isolation and characterisation of P450 gene(s) in barley (Hordeum vulgare)Nguyen, Linh Unknown Date (has links)
In plants, P450 enzymes encoded by P450 genes play a central role in numerous biosynthetic pathways, such as the production of secondary metabolites, stress responses and disease resistance. This thesis reports upon the utilization of molecular biology techniques to study P450 gene(s) in barley (Hordeum vulgare L.).Using several combinations of degenerate primers, a large number of barley P450 gene fragments were cloned and sequenced from two commercial varieties, Chebec and Harrington. Among 247 isolated sequences, twenty six percent were homologous to genes of known function. The abundance of these sequences differed between the two cultivars. Variations in the motif sequences of the cloned genes were also found between these two cultivars. In addition to the cloned fragments, twenty-two putative barley P450 encoding genes were identified from 24,000 cereal sequences in the International Triticeae EST Cooperative (ITEC) database by homology search. Among these Expressed Sequence Tag (EST) sequences, a full-length P450 sequence was selected for further investigation in this study.This novel P450 gene, CYP72A39, was expressed at a very early vegetative stage, but no expression was detected at the reproductive stage. Comparison of expression profiles of this gene and “digital expression” databases confirmed that this gene was homologous to several cereal EST clones with tissue-specific transcripts responding to various environmental stimuli, such as stresses and disease. Among these, many transcripts in barley were obtained from stressed tissues at the vegetative stage, and two transcripts in wheat (Triticum aestivum L.) were expressed after being challenged by barley powdery mildew pathogen (Blumeria graminis f. sp. hordei L.). This suggested that CYP72A39 may play a defence role in the barley seedling.The secondary structure of CYP72A39 was investigated in a comparative analysis using a computational approach. However, attempts to express CYP72A39 in a heterologous system and functional assays of the native protein in barley did not give decisive results, due to the disordered structure of the native protein and limitations of the current method. Screening the 3’ UnTranslated Region (3’UTR) of this gene in 158 genotypes of domesticated, landrace and wild barley revealed two haplotypes, which differed by a 12 base indel positioned between two transversions. The presence of both haplotypes in wild and cultivated barley suggests this polymorphism predates the domestication of barley. This indel was mapped to the long arm of chromosome 6H, less than 10 centi-Morgans (cM) from the gene encoding resistance to powdery mildew in barley (B. graminis). A comparison between haplotype diversity and powdery mildew resistance data for over 102 genotypes showed a weak link between the ‘long’ haplotype and resistance, while the ‘short’ haplotype was associated with susceptibility. There was no evidence for a strong correlation between haplotype and quality type (malt or feed); however, more malting varieties had the long haplotype, suggesting a possible association with some attributes in modern malting barley. There was no evidence for association with other characteristics such as geographic origin, growth habit or row number. Phylogenetic relationship of the CYP72A39 to other CYP72 members was also investigated.
|
178 |
Atmospheric Turbulence Characterisation Using Scintillation Detection and RangingMohr, Judy Lynette January 2009 (has links)
Astronomical images taken by ground-based telescopes are subject to aberrations induced by the Earth's atmosphere. Adaptive optics (AO) provides a real-time solution to compensate for aberrated wavefronts. The University of Canterbury would like to install an AO system on the 1-m McLellan telescope at Mount John University Observatory (MJUO). The research presented in this thesis is the first step towards this goal. To design an effective AO system it is important to understand the characteristics of the optical turbulence present at a site. Scintillation detection and ranging (SCIDAR) is a remote sensing method capable of measuring the refractive index structure constant, Cn2(h), and the wind velocity profile, V(h). The dominant near ground turbulence (NGT) at MJUO required the use of both pupil-plane and generalised SCIDAR. A purpose-built SCIDAR system was designed and constructed at low cost, using primarily off-the-shelf components. UC-SCIDAR saw first light at MJUO in 2003, and has since undergone several revisions. The current version employs two channels for simultaneous pupil-plane and generalised SCIDAR measurements, and is very portable. Through the use of a different mounting plate the system could be easily placed onto any telescope. Cn2(h) profiling utilised standard analysis techniques. V(h) profiling using data from a 1-m telescope is not common, and existing analysis techniques were extended to provide meaningful V(h) profiles, via the use of partial triplet analysis. Cn2(h) profiling between 2005 and 2007 indicate strong NGT and a weak turbulent layer located at 12 - 14 km above sea level, associated with the tropopause region. During calm weather conditions, an additional layer was detected at 6 - 7 km above sea level. V(h) profiles suggest that the tropopause layer velocity is nominally 12 - 30 m/s, and that NGT velocities range from 2 m/s to over 20 m/s, dependent on weather. Little seasonal variation was detected in either Cn2(h) or V(h) profiles. The average coherence length, $r_0$, was found to be 12+-5 cm and 7+-1 cm for pupil-plane and generalised measurements respectively, for a wavelength of 589 nm. The average isoplanatic angle, $\theta_0$, was 1.5+-0.5 arcseconds and 1.1+-0.4 arcseconds for pupil-plane and generalised profiles respectively. No seasonal trends could be established in the measurements for the Greenwood frequency, $f_G$, due to gaps present in the V(h) profiles obtained. A modified Hufnagel-Valley (HV) model was developed to describe the Cn2(h) profiles at MJUO. The estimated $r_0$ from the model is 6 cm for a wavelength of 589 nm, corresponding to an uncompensated angular resolution, $\theta_{res}$, of 2.5 arcseconds. $\theta_0$ is 0.9 arcseconds. A series of V(h) models were developed, based on the Greenwood wind model with an additional Gaussian peak located at low altitudes, to encompass the various V(h) profiles seen at MJUO. Using the modified HV model for Cn2(h) profiles and the suggested model for V(h) profiles in the presence of moderate ground wind speeds, $f_G$ is estimated at 79 Hz. The Tyler frequency, $f_T$, is estimated at 11 Hz. Due to financial considerations, it is suggested that the initial AO design for MJUO focuses on the correction of tip/tilt only, utilising self-guiding, as it is unlikely that any suitable guide stars would be sufficiently close to the science object. The low $f_T$ suggests that an AO system with a bandwidth in the order of 60 Hz would be adequate for tip/tilt correction.
|
179 |
Characterisation of Novel Starch Materials: Structure-Functionality RelationshipTan, Ihwa Unknown Date (has links)
Starch is an attractive raw material for biodegradable plastic applications due to its low cost, its availability in large quantities and its excellent thermal process-ability using conventional plastic processing equipments. Despite its attractive potential as a biopolymer material, the use of starch in biodegradable plastic applications is yet limited by its structural and functional properties, which are dictated by its genetic make up. This dissertation involves in-depth characterisations of a range of biotechnologically derived novel starches from different cereal sources to elucidate the relationship between starch structure and functionality. The importance of understanding starch structure-functionality relationship to further the development of starch biodegradable plastics are discussed to identify the research questions, which underlie the motivation of this dissertation and to contextualize the objectives of this dissertation. Diversities in starch macromolecular properties namely the amylose content and amylopectin chain length distribution are evident in these novel starches. The variation in amylopectin structure in these novel starches is explicable by considering the particular inhibition of starch biosynthesis gene expression in the generation of these starch mutants. Amylose content and amylopectin chain length distribution are two separate structural parameters in starch, which influence the granular and functional properties of starch. An improved method to analyse the 13C solid state NMR spectra for native starches was developed in this dissertation and provides the first elucidation on the occurrence of V-type polymorph, which is significant in high amylose starches. An increase in starch amylose content (or decrease in amylopectin content) leads to a decrease in the double helix content and crystallinity. A transition in the double helical packing arrangement of amylopectin side chains from A-type to B-type polymorph is noted for high amylose starches. This can be attributed to the changes in their amylopectin chain length distribution, which leads to the tendency of the glucan chains to form the B-type polymorph during crystallisation from thermodynamic considerations. The application of MTDSC provides the first elucidation on the step transition or heat capacity change, which is noted to occur within the gelatinisation endotherm for all starches. The use of Rheoscope, which allows for simultaneous monitoring of the changes in starch granular and rheological properties during gelatinisation, reveals that the manifested changes in viscosity can be attributed to the increase in the granules size as a result of swelling, the change in granules properties from rigid to more deformable granules due to water penetration and the increase in the viscosity of the continuous phase due to leaching of amylose. The variation in starch gelatinisation thermal properties namely the onset temperature, enthalpy and heat capacity change can be attributed to the variation in amylopectin chain length distribution, amylose content and the amount of starch structural order. A reduction in swelling power with increasing amylose content is consistently noted for all starch types. The variation in starch rheological responses during gelatinisation can be mainly attributed to the swelling ability of starch granules and their granule size distribution (to a lesser extent). Further MTDSC investigations on starch gelatinisation in the presence of water and glycerol with different concentrations indicate that plasticisation of starch granules prior to gelatinisation does not occur. The observed mid-temperature of the step transition (heat capacity change) is more likely due to a change in state of the starch macromolecules from being highly restrained within the granular packing to entangled macromolecules (as the order to disorder transition occurs) rather than due to glass transition. The addition of glycerol promotes starch gelatinisation in a similar way as the addition of water, which suggests that the same structural changes occur during gelatinisation regardless of the solvents used. In summary, the following starch structure-functionality relationships are deduced. The variation in starch macromolecular properties can be attributed to their corresponding mutation of starch biosynthetic genes expression. The variation in starch amylose content affects the extent of structural order inside the granules while the double helix packing arrangement is influenced by the amylopectin chain length distribution. Starch gelatinisation thermal properties are mainly influenced by the amylopectin chain length distribution while the swelling power and rheological properties are mainly affected by the amylose content.
|
180 |
Genetic characterisation of fungal disease resistance genes in grapevine using molecular marker technologyVeikondis, Rene 12 1900 (has links)
Thesis (MSc)--Stellenbosch University, 2014. / ENGLISH ABSTRACT: The aim of this study on grapevine was to genetically characterise, validate and map the reported fungal disease resistance genes of Pölöskei Muskotály (PM), Kishmish Vatkana (KV) and Villard Blanc (VB) in South Africa using QTL analysis. These fungal resistant parents were crossed with other varieties that have desirable fruit qualities in an effort to combine fungal disease resistance with desirable fruit qualities in a single variety. The genetic basis of PM’s resistance to downy and powdery mildew has not been investigated before. It does however have VB in its pedigree so the assumption was made that the same QTL/genes present in VB contribute to this resistance. KV’s resistance to powdery mildew reportedly originates from the REN1 gene located on chromosome 13. VB’s powdery and downy mildew resistance is conferred by QTL present on chromosome 15 and chromosome 18 respectively and has been reported in numerous studies.
The study populations comprised of 124 F1 PM x Regal Seedless plants, 16 F1 PM x G4-3418 plants, 14 F1 PM x Sunred Seedless plants, 158 F1 Sunred Seedless x KV plants and 250 F1 VB x G1-6604 plants. DNA was extracted from the leaves and all plants were screened using microsatellite markers. Phenotypic evaluations of downy and/or powdery mildew resistance were performed on the appropriate populations. The molecular data was used to generate linkage maps and combined with phenotypic data to perform QTL analysis. From the molecular data generated for the three PM populations it was determined that the F1 progeny inherited almost exclusively maternal alleles, and could not be used in a mapping study. These populations were eliminated from the study and PM will be used as a pollen donor in future. Molecular data from the Sunred Seedless x KV cross was used to generate a linkage map for chromosome 13 comprising eight markers and spanning 45.6 cM. When combined with the data from two powdery mildew phenotypic screens a QTL peak spanning the REN1 gene on chromosome 13 of KV was identified. This locus explains between 44.8% and 57.7% of the phenotypic variance observed. The molecular data from the VB x G1-6604 cross was used to generate partial linkage maps for chromosome 15 and 18. Eleven markers were mapped on chromosome 15 spanning 56.4 cM, and ten markers were mapped on chromosome 18 spanning 101.8 cM. When the chromosome 15 linkage map was combined with the data from two powdery mildew phenotypic screens a QTL associated with powdery mildew resistance was identified on chromosome 15 that explains between 18.9% and 23.9% of the phenotypic variance observed. Likewise a QTL associated with downy mildew resistance was identified on chromosome 18 when the chromosome 18 linkage map was combined with data from two downy mildew phenotypic screens. This QTL explains between 19.1% and 21.2% of the phenotypic variance observed.
This study succeeded in genetically characterising the fungal disease resistance genes of two different sources of grapevine and provided exclusionary information on a third resistance source for future breeding applications. / AFRIKAANSE OPSOMMING: Die doel van hierdie studie in wingerd was om die genetiese komponent van die swamweerstandsgene van Pölöskei Muskotály (PM), Kishmish Vatkana (KV) and Villard Blanc (VB) in Suid-Afrika te karakteriseer en die teenwoordigheid daarvan te bevestig deur ʼn Kwantitatiewe Eienskap Lokus (KEL) benadering te volg. In ʼn poging om swamweerstand en goeie vrugeienskappe te kombineer in ʼn enkel variëteit is die weerstandige variëteite met vatbare variëteite gekruis wat goeie vrugeienskappe besit. Die genetiese basis van PM se weerstand teen donsskimmel en witroes is nog nie vantevore bestudeer nie. VB is een van sy voorgeslagte en daar is aangeneem dat dieselfde KEL/gene waarskynlik verantwoordelik is vir die weerstand. Dit is gerapporteer dat KV se witroesweerstand afkomstig is van die REN1 geen op chromosoom 13. Vele publikasies rapporteer VB se weerstand teen witroes en donsskimmel Beide die witroes- en donsskimmelweerstand word oorgedra deur KEL teenwoordig op chromosome 15 en 18 onderskeidelik.
Die populasies gebruik in hierdie studie het bestaan uit 124 F1 PM x Regal Seedless plante, 16 F1 PM x G4-3418 plante, 14 F1 PM x Sunred Seedless, 158 F1 Sunred Seedless x KV plante en 250 F1 VB x G1-6604 plante onderskeidelik. Blare is versamel vir DNS isolasie en genotipering met mikrosatellietmerkers. Al drie populasies se weerstand teen donsskimmel en/of witroes is fenotipies geëvalueer. Die molekulêre data is gebruik om genetiese koppelingskaarte op te stel en gekombineer met die fenotipiese data om KEL analise uit te voer. Die molekulêre data van die drie PM populasies het daarop gedui dat die F1 nageslag amper uitsluitlik moederlike allele geërf het en kon gevolglik nie gebruik word in die studie nie. Die PM populasies is uitgesluit uit hierdie studie en PM sal voortaan as stuifmeelskenker gebruik word. Molekulêre data van die Sunred Seedless x KV kruising is gebruik om ʼn koppelingskaart vir chromosoom 13 op te stel wat 45.6 cM lank is en agt merkers bevat. Die KEL analise van die koppelingskaart en twee fenotipiese datastelle vir witroes het ʼn KEL piek geïdentifiseer wat oor die lengte van die REN1 geen-interval strek. Hierdie lokus is verantwoordelik vir 44.8% tot 57.7% van die fenotipiese variasie wat waargeneem word. Molekulêre data van die VB x G1-6604 kruising is gebruik om gedeeltelike koppelingskaarte vir chromosome 15 en 18 op te stel. Elf merkers karteer op die chromosoom 15 kaart van 56.4 cM en tien merkers karteer op die chromosoom 18 kaart van 101.8 cM. KEL analise van chromosoom 15 se koppelingskaart en twee witroes fenotipiese datastelle het ʼn KEL geïdentifiseer wat 18.9% tot 23.9% van die fenotipiese variasie verduidelik. ʼn KEL is ook op chromosoom 18 geïdentifiseer wat 19.1% tot 21.2% van die fenotipiese variasie verduidelik met die gekombineerde analise van chromosoom 18 se koppelingskaart en twee donsskimmel fenotipiese datastelle.
Hierdie studie het die genetiese komponent van die swamweerstandsgene van twee Vitis variëteite suksesvol gekarakteriseer en bevestig. Waardevolle telingsinligting oor die derde variëteit is ook onthul.
|
Page generated in 0.0891 seconds