Graduation date: 1995

The research involved development of two ecological simulation models to explain the complex dimensionality of chinook salmon (Oncorhynchus tshawytscha) life history structure (represented by the age composition of the spawning stock) and management difficulties entailed in the complexity. Since different sizes of chinook salmon are thought to adapt differently to heterogeneous habitats, age composition of the spawning stock is determined by characteristics of the habitats of the substocks. Numerical properties of substocks result from the incorporation of individual spawners in different age classes and each substock performs differently because their age compositions are distinctive. A stock or population consists of substocks whose age compositions are concordant with their habitats. The productive capacity of a population will result from the incorporation of substocks. If habitat structures of streams are different, the age and size compositions and productive capacity of the populations may differ. Selective harvesting affects spawners in different ways, so that age compositions must be deformed differently by fishing pressure. Once the age composition deviates from the natural age composition, the productivity of the population will decrease. Population dynamics are strongly correlated with substock structure which is determined by habitat structure in a stream system. Hierarchical population structure make fisheries management difficult and requires not only quantitative but also qualitative analysis on the populations in relation to habitat classification. / Graduation date: 1990

Thesis (Ph. D.)--University of Canterbury, 2008. / Typescript (photocopy). Includes bibliographical references. Also available via the World Wide Web.

Thesis (Ph. D.)--Oregon State University, 2011. / Printout. Includes bibliographical references (leaves 126-139). Also available on the World Wide Web.

Thesis - Oregon State University. / Bibliography: ℓ.95-99. Also available online.

Stress, including extreme or rapidly changing temperatures, are known to have deleterious effects on fish health and physiology. This thesis examines the combined effects of elevated acclimation temperature and acute handling stress on the number of antibody producing cells, plasma lysozyme concentrations, and the number of pronephric leukocytes in juvenile chinook salmon (Oncorhynchus tshawytscha). An additional goal of this thesis was to explore the effects of a temperature fluctuation, as a potential instigator of thermal shock, on innate immunity in wild fall chinook salmon of the Columbia River, specifically to determine if there are effects on plasma lysozyme concentrations and on the frequencies of lymphocytes, neutrophils, and thrombocytes in circulation. Finally, based on results found in an experiment involving elevated acclimation temperature, the relationship between the number of antibody producing cells and fish body weight was examined. Plasma lysozyme concentrations and the number of pronephric leukocytes were both affected by acclimation to 21��C compared to 13��C. While a positive relationship was found between temperature and lysozyme, an inverse relationship was found between temperature and the number of pronephric leukocytes. Plasma lysozyme concentrations, the number of pronephric leukocytes, and the number of antibody producing cells did not respond to the stressor, and the combination of elevated temperature and stress did not have an additive effect on any of the physiological or immunological variables studied. Differences between controls and temperature-treated fish were not detected among individual time points throughout a temperature fluctuation experiment, despite overall responses in plasma lysozyme concentrations and the frequencies of circulating lymphocytes. The frequencies of circulating neutrophils and thrombocytes did not respond to the thermal stressor. Finally, a significant positive relationship was detected between the number of antibody producing cells (assessed by a hemolytic plaque assay) and body weight among non-stressed fish acclimated to 21��C and 13��C. Regardless of acclimation temperature, these results emphasize the importance of the standardization of fish size for immunological experiments. Results from this thesis suggest that some components of innate immunity are affected by elevated acclimation temperatures and that the adaptive immune system is affected by acclimation temperature differently in small and large fish. / Graduation date: 2001

Genetic differences between early and late forms of Alaskan chinook salmon (Oncorhynchus tshawytscha) were identified using two genetic approaches: mitochondrial DNA (mtDNA) analysis and protein electrophoresis. The study populations consisted of early- and late-run chinook salmon in each of the Kenai and Kasilof rivers in Alaska, and a single population from the Minam River, Oregon, that provided a relative scale for the differences among the Alaskan populations. Two segments of mtDNA were amplified separately using the polymerase chain reaction (PCR) and then digested with 14 to 16 restriction enzymes. Results showed that the two early runs were genetically similar to each other but different from either of the late runs. The late runs were different from each other based on the frequency of the common haplotypes. The Minam River stock shared two haplotypes with the Alaskan stocks and displayed one unique haplotype. The frequency difference in the shared haplotypes together with the presence of a unique haplotype allowed us to separate the Oregon population from those in Alaska. In the protein analysis, each of the five populations was examined at 30 allozyme loci to determine variation within and between the runs. Based on 14 polymorphic loci, Minam River chinook salmon were genetically distinct from the Alaskan populations. Within the Alaskan populations, the two early runs were most similar to each other but different from the two late runs; the two late runs were also genetically most similar to each other. Based on all loci, protein electrophoresis proved to be a useful technique to separate stocks of chinook salmon. On a locus by locus basis, however, mtDNA was more powerful. Both mtDNA and allozyme analysis suggest that chinook salmon may segregate into genetically different early and late forms within a drainage. / Graduation date: 1995

The average size and age of chinook salmon (Oncorhynchus tshawytscha) caught in commercial fisheries along the Pacific Coast of North America have decreased substantially in this century. These declines might be caused in part by changes in size and age at maturity within the stocks contributing to those fisheries. Upriver Brights (Brights), a stock of fall chinook salmon in the Columbia River, are one of those stocks. The purposes of this study were to (1) determine if average size and age at maturity of Brights have declined, (2) gain a better understanding of the factors that may contribute to such declines, and (3) describe potential consequences of these changes. Data from in-river fisheries suggest that the average weight of mature Brights returning to the Columbia River has decreased approximately 2.7 kg since the 1910s, an average rate of about 0.1 lb·yr⁻¹ (45 g·yr⁻¹ ). Most of the potential biases in these data tend to make this estimate conservative. Insufficient data were available to describe changes in average age at maturity. There are many potential causes for the decline in average size of mature Brights, including factors that affect very early life stages. Other researchers have determined that size at maturity appears to be highly influenced by inheritance, gender, and growth rate. I describe how maternal size can influence -- through time of spawning, choice of spawning site, and egg size -- the viability of the young, which carry the dam's genes for size. The size-related ability to produce viable offspring may have been changed by modifications in the environment. Very little is known about how changes in the natural environment for spawning, incubation, and rearing may have contributed to a decline in average size at maturity. Artificial propagation and rearing, such as at Priest Rapids Hatchery, seems to produce adult Brights that are smaller, younger, and more likely to be male than their natural counterparts. The net result is that the average hatchery fish may have only about 0.80 of the reproductive potential of the average natural fish. Changes in growth conditions in the ocean probably did not contribute to the change in size, although the ocean fisheries of Southeast Alaska and British Columbia appear to select, in the genetic sense, against large size and old age in Brights. Since 1978, in-river commercial fisheries have caught larger Brights and a higher proportion of females than are found in the escapement of the Priest Rapids Hatchery component of the stock, but the fisheries impact the two sexes differently by taking the larger males and the smaller females. The effect on the natural component may differ because of their apparently larger average size. I found no evidence that larger fish or more females were caught when 8-in. minimum restrictions were in effect on gillnet mesh size relative to periods when mesh size was not restricted. Impounding the mainstem during the last 50+ yr may have removed obstacles to migration (e.g., Celilo Falls) that selected for large size in Brights, but that hypothesis could not be tested. The perserverance of larger and older phenotypes in the Bright stock suggests that countervailing selection -- perhaps during spawning, incubation, and/or early rearing -- may have resisted the effects of a century of size- and age-selective fisheries. That resistance, however, may reduce the productivity of the stock. Declines in average size and age at maturity can have undesireable consequences. Lower average size means less biomass landed and lower commercial value. Lower average fecundity and a diminished ability to reproduce in some environments are also expected. Loss of size and age classes may reduce the ability of the stock to adapt to environmental variations. These results are relevant to several management practices. A holistic approach to fishery management issues is necessary to avoid erroneous conclusions based on narrow perspectives. Measuring reproductive potential of the catch and escapement would be superior to the conventional practice of simply counting numbers of fish. Many aspects of artificial propagation can be improved, including broodstock aquisition, mating regimes, and rearing practices. Stock abundance is a major factor in determining the effect of many management practices on the stock. In general, fisheries managers must be mindful that they manage very complex natural systems. / Graduation date: 1992

Thesis (M.S.)--Oregon State University, 2006. / Printout. Includes bibliographical references (leaves 63-68). Also available on the World Wide Web.

Innate species-specific temperature preferences of fish are subjected to fluctuations under a variety of environmental, physiological, and developmental conditions. The temperature preference patterns of two ecologically distinct races of chinook salmon (Oncorhynchus tshawytscha) were investigated as laboratory held animals underwent smoltification. Smoltification is a distinct developmental stage in the life history of anadromous salmonids when juvenile fish undergo profound behavioral, morphological, and physiological differentiation prepatory to seawater entry. A group of spring and fall chinook salmon were held under identical conditions of increasing water temperature over the course of smoltification. Another group of spring and fall chinook salmon were held at a constant water temperature of 8° C over the same period of time. Changes in the preferred temperature of juvenile chinook salmon were associated more closely with the size (fork length) of fish than with time (days). Both spring and fall chinook salmon held at 8° C showed an increase in thermal preference of about 1° C as fork length increased in these respective groups. This increase in thermal preference is thought to be thermoregulatory, accelerating smolt development in fish held in inhibitory low water temperatures. Spring chinook salmon held at increasing water temperatures showed no change in thermal preference associated with smoltification. Fall chinook salmon held at increasing water temperatures displayed a large drop in thermal preference towards the end of smolt development. Differences in the thermal preference patterns of spring and fall chinook salmon during smoltification may result from local habitat adaptations, as well as seasonal differences in smolt migration.