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Yes / Coral reefs are important ecosystems that not only provide shelter and breeding ground for many marine species, but can also control of carbon dioxide level in ocean and act as coastal protection mechanism. Reduction of coral reefs at Singapore coastal waters (SCW) region remains as an important study to identify the environmental impact from its busy industrial activities especially at the surrounding of Jurong Island in the south. This kind of study at SCW was often being related to issues such as turbidity, sedimentation, pollutant transport (from industry activities) effects in literatures, but seldom investigated from the thermal change aspect. In this paper, a computational model was constructed using the Delft3D hydrodynamic module to produce wave simulations on sea regions surrounding Singapore Island. The complicated semi-diurnal and diurnal tidal wave events experienced by SCW were simulated for 2 weeks duration and compared to the Admiralty measured data. To simulate the thermal mapping at the south Singapore coastal waters (SSCW) region, we first adapted a conversion of industrial to thermal discharge; then from the discharge affected area a thermal map was further computed to compare with the measured coral map. The outcomes show that the proposed novel thermal modelling approach has quite precisely simulated the coral map at SSCW, with the condition that the near-field thermal sources are considered (with the coverage area in the limit of 20 km × 20 km). / The author also acknowledges the support of Nazarbayev University’s (Kazakhstan) research seed grant no. KF-12/6 for purchasing and providing the Delft3D software used in this study (which the author is the principal investigator of the grant)

Thomas Schelling proposed a simple spatial model to illustrate how, even with relatively mild assumptions on each individual's nearest neighbor preferences, an integrated city would likely unravel to a segregated city, even if all individuals prefer integration. Many authors assumed that the segregation which Schelling observed in simulations on very small cities persists for larger, realistic size cities. We describe how different measures can be used to quantify the segregation and unlock its dependence on city size, disparate neighbor comfortability threshold, and population density. We develop highly efficient simulation algorithms and quantify aggregation in large cities based on thousands of trials. In particular, we show that for the values of disparate neighbor comfortability threshold used by Schelling, the striking global aggregation Schelling observed is strictly a small city phenomenon. Along the way we prove that in the Schelling model, in the process of evolution, the total perimeter of the interface between the different agents always decreases, which provides a useful analytical tool to study the evolution. At the isolated reef Kingman, it was recently discovered that apex predators constitute 85% of the total fish biomass. This is in sharp contrast to most reefs, where the prey biomass substantially dominates the total fish biomass. The recent study at the two pristine reefs, Kingman and Palmyra also indicates that the predator:prey fish biomass ratio is an increasing function of reef cover. Based on these field observations, we model the fish biomass structure at a pristine coral reef. We introduce a new refuge based mechanism for predator-prey interaction with an explicit dependence on refuge size. Our refuge based model does not assume mass action interaction between predators and prey and may provide a new mechanism in ecology to produce inverted biomass pyramids. Our model yields both the inverted biomass pyramid and the increasing dependence of the predator:prey biomass ratio on reef cover. We add various forms of fishing to our model, and show that sufficiently high fishing pressure with quite general types of fishing transforms the inverted biomass pyramid to be bottom heavy.

Thesis (M.A.)--University of Hawaii at Manoa, 2005. / Includes bibliographical references (leaves 80-94). / xvii, 94 leaves, bound ill. (some col.), maps (some col.) 29 cm

Thesis (M.S.)--University of North Carolina at Wilmington, 2004. / Includes bibliographical references (leaves : [35]-41).

This paper concerns the planning for sustainable development of a global common pool resource within an autocratic region. The study is focused on the coral reef of the Red Sea, shared between the basin countries; Djibouti, Egypt, Saudi Arabia, Sudan, Yemen, Somalia, Israel, Jordan and Eritrea, where most nations are autocracies and developing countries. The viewpoint of this research is the only multinational project within the region focused on the conservation and sustainability of the coral reefs in the Red Sea, the “Regional Action Plan for the Conservation of Coral Reefs in the Red Sea and Gulf of Aden (RAP CCRRSGA)”. The aim of the research in this paper is to study the planning of this project in relation to sustainable development, through an interpretation of Ostrom’s framework using seven out of eight design principles. This research is executed through a method of ideal-type analysis, in order to assess how ideal-types of these design principles correlate with the planning of this project through similarities between the project and the design principles. This research has resulted in and demonstrated the importance of clarified compliance and cooperation, to reach effective and successful planning of sustainable development pertaining to a shared common pool resource within an autocratic region.

The Florida Reef Tract in Southeast Florida is made up of hard-bottom formations. The shape and size of the tract is constantly changing. One major factor contributing to these changes is the movement of sand. This is influenced by location-based, human-induced, and natural factors. These shifting sands cover or uncover reef structure. Images of the Florida Reef Tract in Palm Beach County were analyzed by the Department of Geosciences at Florida Atlantic University, using a partially automated method of mapping. There are notable changes in reef structure throughout the years 2004-2006, in which many major storm events occurred in the region. A time series analysis was conducted throughout these years. Losses and gains of reef structure were quantified and compared throughout the county as a whole, in beach renourishment project areas, and inlet intervals. Trends suggest that the major storms of 2004-2006 may have had effects on the reef tract. / by Joseph G. Pitti. / Thesis (M.A.)--Florida Atlantic University, 2011. / Includes bibliography. / Electronic reproduction. Boca Raton, Fla., 2011. Mode of access: World Wide Web.

published_or_final_version / Earth Sciences / Doctoral / Doctor of Philosophy

Tropical coral reefs are among the most diverse ecosystems of the world but facing increasing threats to their health. Over the last thirty years, many Caribbean coral reefs have undergone dramatic changes and experienced large losses in coral cover, due to direct and indirect anthropogenic disturbances. The results of which are reefs with low rugosity, changed trophic dynamics and low fish diversity. In recent times reefs have failed to recover from disturbances due to an increase in frequency and severity of disturbances and stresses. In the Caribbean on many coral reefs this has resulted in a shift towards macroalgal dominance by species of the phylum Phaeophyta. The processes and factors affecting the standing crop of macroalgae are many and complex. Two main hypotheses are identified in the literature as being the driving forces of algal dynamics: nutrient dynamics (availability, supply and uptake) and herbivory. However, many studies have been found to be inconclusive because of the complexity of the coral reef ecosystem, which makes it difficult if not impossible to control for all factors and processes influencing the standing crop of macroalgae such as light, water flow and sedimentation. The inherent characteristics of macroalgae, like morphology and life history, make them behave differently. Whilst herbivore characteristics, like size of mouth parts, feeding modes and preferences, will influence the amount of algal biomass removed. The spatial context (i.e. coral fore reef vs. back reef) will influence the effects of both bottom-up and top-down controls. Besides these inter-habitat differences, macroalgae within similar habitats but differing geographical locations may respond differently, for example, a forereef exposed to the open ocean or a forereef located in a sheltered bay. This thesis attempts to provide insight into the dynamics of two dominant brown macroalgae on Caribbean coral reefs, Dictyota spp. and Lobophora variegata. This aim was addressed by developing a model for the macroalga species Dictyota to model the various processes and factors on a coral forereef affecting percentage cover. Further, the patch dynamics of both Lobophora variegata and Dictyota were investigated to gain an insight into their dynamics under varying environmental conditions: the windward and leeward sides of an atoll. Finally, herbivory is identified as one of the key process affecting macroalgal cover. I investigated this process by deploying cages on both the windward and leeward side of the atoll to investigate the effects of grazing pressure under varying environmental conditions. A Bayesian Belief Network model was developed for Dictyota spp. to model the bottom-up and top-down processes on a coral forereef determining the percentage cover. The model was quantified using relationships identified in the scientific literature and from field data collected over a nine moth period in Belize. This is the first BBN model developed for brown macroalgae. The fully parameterized model identified areas of limited knowledge and because of its probabilistic nature it can explicitly communicate the uncertainties associated with the processes and interactions on standing crop. As such the model may be used as a framework for scientific research or monitoring programmes and it is expected that the model performance to predict macroalgal percentage cover will improve once new information becomes available. Size-based transition matrices were developed for both Dictyota spp. and Lobophora variegata to investigate the patch dynamics under varying environmental conditions: the windward and leeward sides of an atoll. The matrices reveal that standard measures of algal percent cover might provide a misleading insight into the underlying dynamics of the species. Modelling the patch dynamics with matrices provided insight into the temporal behaviour of macroalgae. This is an important process to understand because patch dynamics are determining competitive interactions with other coral reef benthic organisms. The outcome of competitive interactions will differ with macroalgal species. This study indicate that Dictyota spp. responded strongly to differing environmental conditions in that it has reduced growth rates and lower percent cover on the leeward side of the atoll, whilst Lobophora variegata showed far less sensitivity to environmental conditions. The patch dynamics of Dictyota spp. also showed a higher temporal variation than Lobophora variegata but only on the exposed forereef. A caging experiment was set up to investigate the response of both macroalgal species to different grazing pressure scenarios, under varying environmental conditions. Dictyota spp. had a significant response to environmental conditions in that a higher percentage cover was found on the exposed side of the atoll, whilst for Lobophora variegata the response was far less obvious. The less clear response of Lobophora variegata was very likely caused by competition of Dictyota with Lobophora due to the very high cover Dictyota obtained in the cages where all herbivores were excluded. The low grazing pressure treatments also showed an increase in cover of Dictyota, whilst for Lobophora, only a reduction in the rate of increase could be observed. The results indicate that on the leeward side of the atoll, fish grazing alone seems sufficient to control the standing crop of Dictyota and Lobophora variegata. Retrospective analysis of the experimental design showed that the limited size of the experimental set up could have confounded the results for Lobophora as well. In future experiments it is recommended to increase number replicates. Management of coral reef habitats is frequently constrained by a lack of funds and resources. The BBN Model once fully parameterized can provide a useful tool for coral reef management, because the model allows exploration of different reef scenario’s, which in turn can aid in prioritizing management strategies. Furthermore, the thesis provided an insight into the complexities of macroalgal dynamics. The responses of macroalgae to physiological factors and ecological processes are species specific and dependent on the location, and caution against generalizing on what controls the standing crop of macroalgae. Therefore it is argued that future investigations into algal ecology should clearly define the species, habitat and location. This can help to make informed management decisions.