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Artificially controllable nanodevices constructed by DNA origami technology: photofunctionalization and single molecule analysis / DNA オリガミ法を使った操作可能なナノデバイスの構築 : その光機能化と一分子観察Yang, Yangyang 24 March 2014 (has links)
京都大学 / 0048 / 新制・課程博士 / 博士(理学) / 甲第18101号 / 理博第3979号 / 新制||理||1574(附属図書館) / 30959 / 京都大学大学院理学研究科化学専攻 / (主査)教授 杉山 弘, 教授 三木 邦夫, 教授 藤井 紀子 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DGAM
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Design and Evaluation of DNA Nano-devices Using DNA Origami Method and Fluorescent Nucleobase Analogues / DNA Origami法および蛍光性核酸類縁体を用いたDNAナノデバイスの設計と評価Yamamoto, Seigi 23 March 2016 (has links)
京都大学 / 0048 / 新制・課程博士 / 博士(理学) / 甲第19525号 / 理博第4185号 / 新制||理||1601(附属図書館) / 32561 / 京都大学大学院理学研究科化学専攻 / (主査)教授 杉山 弘, 教授 三木 邦夫, 教授 藤井 紀子 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DGAM
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Control of DNA Origami from Self-Assembly to Higher-Order AssemblyJohnson, Joshua A., Dr. 07 October 2020 (has links)
No description available.
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Nanoscale Surface Patterning and Applications: Using Top-Down Patterning Methods to Aid Bottom-Up FabricationPearson, Anthony Craig 31 August 2012 (has links) (PDF)
Bottom-up self-assembly can be used to create structures with sub-20 nm feature sizes or materials with advanced electrical properties. Here I demonstrate processes to enable such self-assembling systems including block copolymers and DNA origami, to be integrated into nanoelectronic devices. Additionally, I present a method which utilizes the high stability and electrical conductivity of graphene, which is a material formed using a bottom-up growth process, to create archival data storage devices. Specifically, I show a technique using block copolymer micelle lithography to fabricate arrays of 5 nm gold nanoparticles, which are chemically modified with a single-stranded DNA molecule and used to chemically attach DNA origami to a surface. Next, I demonstrate a method using electron beam lithography to control location of nanoparticles templated by block copolymer micelles, which can be used to enable precise position of DNA origami on a surface. To allow fabrication of conductive structures from a DNA origami template, I show a method using site-specific attachment of gold nanoparticles to and a subsequent metallization step to form continuous nanowires. Next, I demonstrate a long-term data storage method using nanoscale graphene fuses. Top-down electron beam lithography was used to pattern atomically thin sheets of graphene into nanofuses. To program the fuses, graphene is oxidized as the temperature of the fuse is raised via joule heating under a sufficiently high applied voltage. Finally, I investigate the effect of the fuse geometry and the electrical and thermal properties of the fuse material on the programming requirements of nanoscale fuses. Programming voltages and expected fuse temperatures obtained from finite element analysis simulations and a simple analytical model were compared with fuses fabricated from tellurium, a tellurium alloy, and tungsten.
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Robust Design Framework for Automating Multi-component DNA Origami Structures with Experimental and MD coarse-grained Model ValidationHuang, Chao-Min January 2020 (has links)
No description available.
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Electrical Characterization and Annealing of DNA Origami Templated Gold NanowiresWestover, Tyler Richard 27 April 2020 (has links)
DNA origami templates have been studied due the versatility of shapes that can be designed and their compatibility with various materials. This has potential for future electronic applications. This work presents studies performed on the electrical properties of DNA origami templated gold nanowires. Using a DNA origami tile, gold nanowires are site specifically attached in a “C” shape, and with the use of electron beam induced deposition of metal, electrically characterized. These wires are electrically conductive with resistivities as low as 4.24 x 10-5 Ω-m. During moderate temperature processing nanowires formed on DNA origami templates are shown to be affected by the high surface mobility of metal atoms. Annealing studies of DNA origami gold nanowires are conducted, evaluating the effects of atom surface mobility at various temperatures. It is shown that the nanowires separate into individual islands at temperatures as low as 180° C. This work shows that with the use of a polymer template the temperature at which island formation occurs can be raised to 210° C. This could allow for post processing techniques that would otherwise not be possible.
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Utilizing DNA Nanostructures for the study of the Force Dependency of Receptor – Ligand InteractionsPatton, Randy Alexander January 2017 (has links)
No description available.
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Assembly and characterization of mesoscale DNA material systems based on periodic DNA origami arraysTurowski, Daniel J. 14 November 2013 (has links)
No description available.
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Biomolecular nanotechnology-based approaches to investigate nucleic acid interactions / バイオ分子ナノテクノロジーに基づいた核酸相互作用の調査Mishra, Shubham 23 March 2022 (has links)
京都大学 / 新制・課程博士 / 博士(理学) / 甲第23724号 / 理博第4814号 / 新制||理||1689(附属図書館) / 京都大学大学院理学研究科化学専攻 / (主査)教授 杉山 弘, 教授 深井 周也, 教授 秋山 芳展 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DGAM
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Artificial Liposome Compartment with DNA Origami Scaffold for Size Exclusion Molecular Transport and Enzyme Cascade Reactions / DNAオリガミを骨格とするリポソーム人工区画による選択的分子輸送と酵素カスケード反応Zhang, Shiwei 25 March 2024 (has links)
京都大学 / 新制・課程博士 / 博士(エネルギー科学) / 甲第25399号 / エネ博第478号 / 新制||エネ||89(附属図書館) / 京都大学大学院エネルギー科学研究科エネルギー基礎科学専攻 / (主査)教授 森井 孝, 教授 片平 正人, 教授 佐川 尚 / 学位規則第4条第1項該当 / Doctor of Energy Science / Kyoto University / DGAM
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