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Improving methods for genotypic drug resistance testing in Mycobacterium tuberculosisMlamla, Zandile Cleopatra 03 1900 (has links)
Thesis (MScMedSc)--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: An important next step to Tuberculosis control relies on the translation of basic science and modern diagnostic techniques into primary health care clinics. These assays must be rapid, inexpensive, interpretation of results must be easy and they must be simple so that a healthcare worker with limited training can perform the tests under safe conditions. This study consists of four aims. The first aim was to develop a methodology to sterilize sputum specimens for rapid TB diagnosis and drug resistance testing. Candidate bactericides were identified from the literature, and tested for their bactericidal activity in Mycobacterium tuberculosis. We identified ultraseptin®aktiv as a powerful bactericidal agent which sterilizes sputum specimens for subsequent safe handling prior to light emitting diode microscopy and it also provides a DNA template for PCR-based tests. An algorithm has been proposed for the processing of specimens and rapid diagnosis of TB and drug resistant TB while patients wait for results.
Recently, the World Health Organization has endorsed the MTBDRplus test for diagnosis of TB and drug resistant TB. However genotypic tests may have more problems than anticipated. With the HIV pandemic, an increase of non-tuberculous mycobacteria has been reported. The sensitivity of genotypic tests in specimens with underlying non-tuberculous mycobacterial species therefore requires further evaluation. This study therefore also aimed at determining the reliability of the MTBDRplus assay for detection of drug resistant TB where non-tuberculous bacterial load is high. Clinically relevant non-tuberculous mycobacterium DNA and DNA from a multi-drug resistant TB isolate were obtained. Ratios of the different NTM with the MDR-TB DNA were made and subjected to the MTBDRplus assay. Known mix NTM and TB infected clinical isolates and sputum sediments were also evaluated for TB and drug resistance detection on the MTBDRplus assay. Under these conditions, this study provides evidence that the MTBDRplus test cannot reliably detect TB and drug resistance TB in specimens with underlying non-tuberculous mycobacteria.
Thirdly, to evaluate the sensitivity of the MTBDRplus assay for detecting drug resistance in hetero-resistant isolates, ratios were made using purified DNA from an MDR and pan-susceptible TB isolate. The MTBDRplus assay was then performed on the different ratios. We report that the MTBDRplus assay can efficiently detect wild type DNA in genes associated with resistance during the early evolution of drug resistance. However, in the later stage during treatment when both the wild type and mutants are present, the detection limit for the mutant DNA was 1:55. Due to these results, the MTBDRplus assay should still be further improved or other tests should be developed to address these limitations.
And finally to combat cross amplicon contamination during the final steps of genotypic detection with the MTBDRplus assay, a proof of concept for a patentable closed tube line probe device was proposed on the 4th aim. This device can be improved to enable automated drug resistance genotyping of multiple specimens.
The results of this study highlight the need for a sensitive inexpensive point of care drug resistance test that does not require intensive training. / AFRIKAANSE OPSOMMING: 'n Belangrike volgende stap om Tuberkulose te beheer is om basiese wetenskap resultate te gebruik sodat moderne diagnose tegnieke ontwikkel kan word wat in primêre gesondheidsorg klinieke toegepas kan word. Hierdie toetse moet vinnig, goedkoop, en die interpretasie van resultate moet maklik wees. Die toetse moet eenvoudig wees sodat 'n gesondheidswerker met beperkte opleiding die toetse onder veilige omstandighede kan uitvoer. Hierdie studie bestaan uit vier doelwitte, waarvan die eerste was om 'n metode te ontwikkel vir die sterilisasie van sputum monsters vir vinnige TB diagnose en die toesting van middelweerstandigheid. Kandidaat kiemdodende middels was geïdentifiseer vanaf die literatuur en die middels se kiekdodende aktiviteit was getoets op Mycobacterium tuberculosis. Ons het ultraseptin®aktiv geïdentifiseer as 'n kragtige kiemdodende middel wat bakteria in sputum monsters steriliseer vir veilige hantering voordat diagnose met 'n lig uitstralende diode mikroskopie gedoen kan word. Hierdie behandeling met ultraseptin®aktiv bied ook 'n DNA templaat vir PCR-gebaseerde toetse. 'n Algoritme is voorgestel vir die hantering van monsters en die vinnige diagnose van sensitiewe- en middel weerstandige Tuberkulose terwyl die pasiënte by die kliniek wag vir die resultate.
Onlangs het die Wêreld Gesondheid Organisasie die genotipiese MTBDRplus toets vir die diagnose van Tuberkulose en middel-weerstandige Tuberkulose onderskryf. Hierdie toets word tans op groot skaal in Suid Afrika gebruik. Dit kan egter wees dat genotipiese toetse baie meer probleme kan he as wat aanvanklik verwag is. Die HIV pandemie gaan toenemend gepaard met n toename van nie-tuberkulose mycobacteria. Die sensitiwiteit van genotipiese toetse op monsters met onderliggende nie-tuberkulose mikobakteriese spesies vereis dus verdere evaluasie. Die doel van hierdie studie was ook om die betroubaarheid van die MTBDRplus-toets te bepaal vir die opsporing van middelweerstandige TB waar die nie-tuberkulose bakteriële lading hoog is. DNA van kliniese relevante nie-tuberkulose mikobakteria en multi-middelweerstige TB isolate was bekom. Verskillende verdunnigs van die spesifieke NTM DNA te same met die van MDR-TB DNA is gemaak en onderwerp aan die MTBDRplus toets. Bekende gemengde NTM- en TB geïnfekteerde kliniese isolate en sputum sedimente was ook geevalueer vir die opsporing van TB en middel weerstandigheid met die MTBDRplus toets. Hierdie studie verskaf bewyse dat die
MTBDRplus toets nie betroubaar is met die diagnose van sensitiewe- en middel weerstandige Tuberkulose in monsters met onderliggende nie-tuberkulose mycobacteria nie.
Verskillende verdunnings van gesuiwerde DNA van MDR en pan-sensitiewe TB isolate is gemaak om die sensitiwiteit van die MTBDRplus toets vir die opsporing van middelweerstandigheid te bepaal. Die MDRDRplus toets is gebruik met hierdie verdunnings. Resultate in hierdie studie toon dat die MTBDRplus toets effektief is met die identifisering van wilde-tipe DNA (dit beteken middel sensitief) in gene wat geassosieer word met middel weerstandigheid gedurende die vroeë ontwikkeling van weerstandigheid. Hier teenoor toon die resultate dat in die later stadium tydens behandeling, wanneer beide die wilde-tipe (sensitief) en mutante DNA (weerstandig) teenwoordig is, is die opsporingslimiet vir die mutante DNA maar 1:55. As gevolg van hierdie resultate raai ons aan dat die MTBDRplus toets nog verder verbeter moet word of dat ander toetse ontwikkel moet word om hierdie beperkinge aan te spreek.
Amplikon kruiskontaminasie kan n groot impak hê op die betroubaarheid van enige genotipiese diagnostiese toets. Die finale stappe van MTBDRplus toets behels die gebruik van 'n oop sisteem sodat kontaminasie maklik kan plaasvind. In die 4de doewit 'n konsep vir 'n patenteerbare geslotebuis toestel ontwikkel en die resultate het getoon dat kontaminasie suksesvol uitgeskakel kan word. Hierdie toestel kan verbeter na 'n outomatiese apparaat verbeter word sodat die module genotipering van verskeie monsters moontlik kan maak.
Die resultate van hierdie studie beklemtoon die noodsaaklikheid van 'n sensitiewe goedkoop “point of care” diagnostiese toets wat nie intensiewe opleiding benodig nie. / Medical Research Council of South Africa / University of Stellenbosch, Dept. of Molecular Biology and Human Genetics
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Educators' knowledge of and attitudes toward fetal alcohol spectrum disorderScheepers, Patricia 12 1900 (has links)
Thesis (MEdPsych (Educational Psychology))--University of Stellenbosch, 2009. / ENGLISH ABSTRACT: Fetal Alcohol Spectrum Disorder, which is the most common cause of mental and learning
disabilities in the world, is totally preventable. Fetal Alcohol Spectrum Disorder is not a
genetic or inherited condition; however, it is permanent and reduces human potential.
There is no cure or treatment. Fetal Alcohol Spectrum Disorder does not distinguish
between race, class or culture and can affect children from all socio-economic groups. It
is however more prevalent amongst poor, uneducated, uninformed and marginalised
(minority groups) or aboriginal communities due to a variety of historical, sociopolitical
and economic reasons. Fetal Alcohol Spectrum Disorder has become a public
health problem in South Africa in provinces like the Western and Northern Cape (winegrowing
areas), where substantial research has been conducted and where alcohol
abuse can be traced back to the ‘dop’ system. The highest documented prevalence of
Fetal Alcohol Spectrum Disorder in the world has been identified in these provinces
amongst a marginalised group of people classified in South Africa as ‘coloured’.
A substantial amount of research has been conducted on the characteristics,
manifestation and prevalence of Fetal Alcohol Spectrum Disorder in South Africa, but
no research has yet been done to ascertain educators’ knowledge of and attitude to
learners with Fetal Alcohol Spectrum Disorder. In view of the high prevalence of Fetal
Alcohol Spectrum Disorder in South Africa, and the possibility that many of the
learners with learning and behavioural problems in our schools could be victims of
Fetal Alcohol Spectrum Disorder (also known as a ‘hidden disability’) I concentrated
my research on schools situated in low socio-economic areas on the Cape Flats where
poverty and unemployment are high and shebeens are plentiful.
Through this research I firstly wished to establish how much knowledge educators have
of Fetal Alcohol Spectrum Disorder and what their attitudes are toward learners
manifesting the disorder. Secondly, my aim was to ascertain to what extent educators
are able to support and identify these learners. Qualitative research methods and an
interpretive constructivist paradigm were used to conduct the study. Data was
primarily collected through the use of interviews, focus group discussions, observations
and a research journal. Nine participants, from three different low socio-economic
schools (one from each educational phase) on the Cape Flats, were involved. Themes
that emerged from the data were analysed and recorded through the constant
comparative method. They are discussed together with the research findings.
This study revealed important issues pertaining to educators’ knowledge of Fetal
Alcohol Spectrum Disorder and whether they are able to assist learners presenting with
this disorder in mainstream education in South Africa. A number of recommendations
are made for further research in this field. / AFRIKAANSE OPSOMMING: Fetale Alkohol Spektrumsindroom, wat as die algemeenste oorsaak van verstandelike
en leergestremdhede in die wêreld beskou word, is ʼn sindroom wat voorkom kan
word. Die sindroom is nie geneties of oorerflik nie, maar die skade is permanent omdat
daar geen behandeling en teenmiddel is nie. Dit het gevolglik ʼn negatiewe impak op
menslike vermoëns. Fetale Alkohol Spektrumsindroom kan kinders van alle sosioekonomiese
groepe affekteer en alhoewel dit nie kultuur-, ras- of klasgebonde is nie, is
dit oorwegend ʼn algemene verskynsel onder groepe met ʼn lae opvoedingspeil, diegene
wat oningelig en gemarginaliseer is (minderheidsgroepe) of dié wat as
inboorlinggemeenskappe bekend staan, wat toegeskryf kan word aan verskeie
historiese, sosio-politieke en ekonomiese redes. Fetale Alkohol Spektrumsindroom is
tans ʼn openbare gesondheidsprobleem in Suid-Afrika, veral in die wynstreke van die
Wes- en Noord-Kaap. Omvattende navorsing is al in genoemde provinsies gedoen
waar alkoholmisbruik ʼn lang aanloop het en verbind word met die dopstelsel. Die
Wes-Kaap en Noord-Kaap is alombekend as provinsies met die hoogste voorkomsyfer
van Fetale Alkohol Spektrumsindroom FASD in die wêreld, veral onder ʼn
gemarginaliseerde groep mense wat as die kleurlinge’ bekend staan.
Alhoewel omvattende navorsing oor die karaktereienskappe, manifestasies en
voorkoms van Fetale Alkohol Spektrumsindroom in Suid-Afrika reeds gedoen is, kon
geen navorsing gevind word wat die kennis van opvoeders en hul en houdings jeens
leerders met Fetale Alkohol Spektrumsindroom probeer vasstel nie. As die hoë
voorkoms van Fetale Alkohol Spektrumsindroom in ag geneem word, asook die
moontlikheid dat baie leerders in ons skole leer- en gedragsprobleme manifesteer, kan
daar waarskynlik slagoffers van Fetale Alkohol Spektrumsindroom wees en wie se
gestremdhede dus ‘onsigbaar’ is. My navorsing fokus daarom hoofsaaklik op skole in
die lae sosio-ekonomiese areas van die Kaapse Vlakte, waar armoede en werkloosheid
hoogty vier en waar daar ʼn hoë voorkoms van onwettige drankwinkels (‘sjebiens’) is.
My primêre doel met hierdie navorsing was om die kennis van onderwysers oor Fetale
Alkohol Spektrumsindroom te bepaal en om die houding van opvoeders jeens leerders
wat met kenmerke van hierdie sindroom vas te stel. Ek wou ook vasstel tot welke mate
opvoeders bevoeg om is leerders met Fetale Alkohol Spektrumsindroom te identifiseer
en te ondersteun. Kwalitatiewe navorsingsmetodes en ʼn interpretatiewe
konstruktivistiese paradigma is in die studie gebruik. Data is primêr ingesamel met
behulp van onderhoude, fokusgroep-besprekings, observasies en ʼn navorsingsjoernaal.
Nege deelnemers verbonde aan drie verskillende skole met lae sosio-ekonomiese vlakke
(een opvoeder van elke opvoedingsfase), op die Kaapse Vlakte was by die studie
betrokke. Temas wat blootgelê is deur die data is ontleed en by wyse van die konstante
vergelykende metode opgeneem. Hulle word saam met die navorsingsbevindings
bespreek. Die navorsing toon belangrike aspekte van opvoeders se kennis van Fetale
Alkohol Spektrumsindroom. Dit bevraagteken ook of hoofstroom-opvoeders in staat is
om leerders met Fetale Alkohol Spektrumsindroom te ondersteun. Voortspruitend uit
die bevindings word aanbevelings gemaak vir verdere ondersoeke op hierdie gebied.
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Neuroprotective effects of the active principles from selected Chinese medicinal herbs on b-amyloid-induced toxicity in PC12 cells.January 2007 (has links)
Hoi, Chu Peng. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2007. / Includes bibliographical references (leaves 81-103). / Abstracts in English and Chinese. / Acknowledgements --- p.II / Abstract --- p.III / Abstract (in Chinese) --- p.V / List of Abbreviations --- p.VI / List of Figures --- p.VIII / List of Tables --- p.X / Table of Contents --- p.XI / Chapter Chapter One --- General introduction --- p.1 / Chapter 1.1 --- Alzheimer's disease --- p.1 / Chapter 1.1.1 --- Epidemiology and risk factors --- p.2 / Chapter 1.1.2 --- Clinical manifestation and course --- p.4 / Chapter 1.1.3 --- Clinical diagnosis --- p.5 / Chapter 1.1.4 --- Neuropathology and pathogenesis of AD --- p.8 / Chapter 1.1.5 --- Drug therapy of AD --- p.11 / Chapter 1.1.5.1 --- Drugs for symptomatic treatment --- p.11 / Chapter 1.1.5.2 --- Drugs based on epidemiology --- p.12 / Chapter 1.1.5.3 --- Drugs with potential disease-modifying effects --- p.14 / Chapter 1.1.5.4 --- Herbal supplements --- p.15 / Chapter 1.2 --- Models for drug discovery in Alzheimer Disease --- p.15 / Chapter 1.2.1 --- In vivo (animal) models --- p.16 / Chapter 1.2.2 --- In vitro (cellular) models --- p.18 / Chapter 1.3 --- Chinese herbs for the treatment of AD --- p.20 / Chapter 1.3.1 --- Ginkgo biloba L --- p.21 / Chapter 1.3.2 --- Magnolia officinalis --- p.24 / Chapter 1.3.3 --- Acori graminei Rhizoma (AGR) --- p.26 / Chapter 1.3.4 --- Gastrodia elata (G. elata) --- p.27 / Chapter 1.3.5 --- Rhodiola rosea L.( R. rosea) --- p.29 / Chapter 1.3.6 --- Scutellariae baicalensis --- p.30 / Chapter 1.3.7 --- Curcuma longa L.(Zingiberaceae) --- p.31 / Chapter 1.4 --- Aims of the study --- p.33 / Chapter Chapter Two --- Materials and Methods --- p.34 / Chapter 2.1 --- Materials --- p.34 / Chapter 2.1.1 --- Chemicals and reagents --- p.34 / Chapter 2.1.2 --- Materials for cell culture --- p.35 / Chapter 2.1.3 --- Instruments --- p.35 / Chapter 2.2 --- Methods --- p.36 / Chapter 2.2.1 --- Cell culture --- p.36 / Chapter 2.2.2 --- MTT cell viability assay --- p.38 / Chapter 2.2.3 --- Characterization of the cytotoxicity of Aβ peptide in NGF-differentiated PC 12 cells --- p.38 / Chapter 2.2.4 --- Screening of the neuroprotective effect of major principles from selected herbs on PC 12 cells against Aβ-induced cytotoxicity --- p.39 / Chapter 2.2.5 --- Measurement of reactive oxygen species (ROS) --- p.40 / Chapter 2.2.6 --- Measurement of intracellular calcium levels --- p.41 / Chapter 2.2.7 --- Measurement of caspase-3 activity --- p.42 / Chapter 2.2.8 --- Propidium iodide (PI) staining to evaluate apoptosis and necrosis --- p.43 / Chapter 2.3 --- Statistics --- p.45 / Chapter Chapter Three --- Results --- p.46 / Chapter 3.1 --- NGF-differentiated PC 12 cells --- p.46 / Chapter 3.1.1 --- Determination of an appropriate cell density for the screening experiments --- p.46 / Chapter 3.1.2 --- Characterization of Aβ-induced cytotoxicity in NGF-differentiated PC 12 cells --- p.47 / Chapter 3.1.2.1 --- Cytotoxicity of Aβ-related fragments in NGF-differentiated PC 12 cells --- p.48 / Chapter 3.1.2.2 --- Dose-dependent cytotoxic effect of Aβ on PC 12 cells --- p.48 / Chapter 3.1.2.3 --- Time-dependent effect of Aβ-induced toxicity on PC12 cells --- p.50 / Chapter 3.1.3 --- Protective effect of selected active principles against Aβ1-4-induced toxicity in PC 12 cells --- p.51 / Chapter 3.2 --- Measurement of reactive oxygen species (ROS) --- p.54 / Chapter 3.2.1 --- Measurement of ROS induced by H202 --- p.54 / Chapter 3.2.2 --- Measurement of ROS induced by Aβ --- p.56 / Chapter 3.3 --- Measurement of Intracellular calcium levels --- p.57 / Chapter 3.4 --- Measurement of caspase-3 activity --- p.58 / Chapter 3.4.1 --- AMC reference standard curve --- p.59 / Chapter 3.4.2 --- Measurement of caspase-3 activity --- p.59 / Chapter 3.5 --- PI staining for evaluate apoptosis and necrosis --- p.60 / Chapter Chapter Four --- Discussion --- p.64 / Chapter 4.1 --- Aβ-induced cytotoxicity in NGF-differentiated PC 12 cells as an in vitro model of Alzheimer's disease --- p.64 / Chapter 4.1.1 --- Cell line selection --- p.65 / Chapter 4.1.2 --- Characterization of Aβ-induced cytotoxicity in NGF-differentiated PC 12 cells --- p.66 / Chapter 4.2 --- Screening of the neuroprotective effects of selected active principles against Aβ-induced cytotoxicity in NGF-differentiated PC 12 cells --- p.67 / Chapter 4.3 --- Neuroprotection via inhibition of the ROS generation --- p.71 / Chapter 4.4 --- Neuroprotection via suppression of calcium homeostasis --- p.73 / Chapter 4.5 --- Neuroprotective via inhibition of Aβ-induced apoptosis --- p.75 / Chapter 4.5.1 --- Inhibition of caspase-3 activation --- p.75 / Chapter 4.5.2 --- PI staining for evaluation of apoptosis and necrosis --- p.76 / Chapter Chapter Five --- Conclusion and future work --- p.79 / Chapter 5.1 --- Conclusion --- p.79 / Chapter 5.2 --- Future work --- p.80 / References --- p.81
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Effect of phytochemicals on estrogen biosynthesis in human breast cancer and placental cells. / CUHK electronic theses & dissertations collectionJanuary 2005 (has links)
A breast cancer cell line stably transfected with the CYP19 gene had been employed for aromatase inhibition. Among the phytochemicals tested, the major dietary flavonoids, such as genistein and daidzein, produced very weak inhibition. On the other hand, the red clover isoflavone biochanin A, the hydroxychalcone butein and the red grape phytoalexin resveratrol were found to be effective aromatase inhibitors. Cell proliferation assay had shown that they could inhibit ER-positive cell proliferation induced by testosterone, and the inhibitory effect was specifically attributed to the reduction of estrogen synthesis. In another breast cancer cell line SK-BR-3, resveratrol, biochanin A and genistein inhibited CYP19 both in enzyme and promoter I.3/II transcriptional levels. The element responsible for the inhibition of aromatase by these phytoestrogens should fall within the region between -556 to -446 by upstream of exon II. / Breast cancer is one of the most common cancers affecting women. Estrogen plays an important role in breast cancer initiation and development. The majority of breast tumors are initially dependent upon estrogen to support their growth. Most breast cancers occur in the postmenopausal period. However, the intra-tumoral estradiol (E2) is maintained at a high level equivalent to the pre-menopausal status. High intra-tumoral E2 level in postmenopausal women is sustained by the biosynthesis of estrogens in the tumorous tissue. / Genistein and Biochanin A, ranged from 0.1 to 10 muM, might act as estrogen agonist and induced aromatase activity and promoter I.1 transactivation in ERalpha-transfected SK-BR-3 cells. (Abstract shortened by UMI.) / The aromatase enzyme, CYP19, belongs to a family of P450 enzyme. As a final rate-limiting step in estrogen biosynthesis, it catalyzes the conversion of C 19 steroids to estrogens. The expression of CYP19 is tissue-specific, and is regulated by alternate promoter usage. The use of aromatase inhibitors for breast cancer treatment has become a major therapeutic approach. / The consumption of some phytochemicals protects against breast cancer. Yet the mechanisms are far from clear. In my present study, various phytochemicals, including phytoestrogens, monoterpenes and carotenoids, were evaluated for their effect on aromatase. / Wang Yun. / "July 2005." / Adviser: Lai-Kwok Leung. / Source: Dissertation Abstracts International, Volume: 67-07, Section: B, page: 3716. / Thesis (Ph.D.)--Chinese University of Hong Kong, 2005. / Includes bibliographical references (p. 145-169). / Electronic reproduction. Hong Kong : Chinese University of Hong Kong, [2012] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Electronic reproduction. [Ann Arbor, MI] : ProQuest Information and Learning, [200-] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Abstract in English and Chinese. / School code: 1307.
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苦參堿時控型結腸定位給藥微丸的製備和體外評價 / Preparation and in-vitro evaluation of time-controlled pellets of Matrine for colon-specific delivery徐樹明 January 2009 (has links)
University of Macau / Institute of Chinese Medical Sciences
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Striatum mosaic disassembling: shedding light on striatal neuronal type functions by selective ablation in genetic models / Etude du rôle de populations neuronales du striatum par ablation sélective dans des modèles murins transgéniquesDurieux, Pierre 25 May 2010 (has links)
The striatum represents the main input nucleus of the basal ganglia, a system of subcortical nuclei critically involved into motor control and motivational processes and altered in several conditions such as Parkinson’s diseases or drug addiction. The projection neurons of the striatum are GABAergic (γ-aminobutyric acid) medium-sized spiny neurons (MSNs), and account for the large majority of striatal neurons, while interneurons represent about 10% of striatal cells. The MSNs are subdivided into two subpopulations that form two main efferent pathways: the striatonigral and striatopallidal neurons. The striatonigral MSNs project to the entopeduncular nucleus (EP) and substancia nigra pars reticulata (SNr) (direct pathway) and co-express dopamine D1 receptors (D1R) and substance P neuropeptide (SP). On the other hand, striatopallidal MSNs project to the lateral globus pallidus (LGP) (indirect pathway) and co-express dopamine D2 receptor (D2R), adenosine A2A receptor (A2AR) and enkephalin (Enk). The D1R striatonigral and D2R striatopallidal MSNs are equal in number and shape and are mosaically distributed through all the striatum. The dorsal striatum is mainly involved in motor control and learning while the ventral striatum is crucial for motivational processes. In view of the still debating respective functions of projection D2R-striatopallidal and D1R-striatonigral neurons and striatal interneurons, both in motor control and learning of skills and habits but also in more cognitive processes such as motivation, we were interested in the development of models allowing the removal of selective striatum neuronal populations in adult animal brain. Because of the mosaical organisation of the striatum, a targeting of specific neuronal type, with techniques such as chemical lesions or surgery, is still impossible. Taking advantage of new transgenic approaches, the goal of the present work was to generate and/or to initiate the characterization of genetic models in which a selective subtype of striatal neuron can be ablated in an inducible way. We used a transgenic approach in which mice express a monkey diphtheria toxin (DT) receptor (DTR) in D2R-striatopallidal or D1R-striatonigral neurons. Local stereotactic injections of DT can then induce selective neuronal ablation in functionally different striatal areas.<p>We first investigated functions of D2R-striatopallidal neurons in motor control and drug reinforcement by their selective ablation in the entire striatum or restricted to the ventral striatum. This DTR strategy produced selective D2R striatopallidal MSN ablation with integrity of the other striatal neurons as well as the striatal dopaminergic function. D2R MSN ablation in the entire striatum induced permanent hyperlocomotion while ventral striatum-restricted ablation increased amphetamine place preference.<p>We next compared respective roles of D2R-striatopallidal and D1R-striatonigral neurons in motor control and skill learning in functionally different striatum subregions.<p>Finally, to target nitrergic interneurons of the striatum, we developed a bacterial artificial chromosome genetic strain in which the cre-recombinase expression is under the control of the neuronal nitric oxide gene promoter.<p><p>Altogether, those results show that DTR expression and DT local injections is an efficient and flexible strategy to ablate selective striatum neuronal types with spatial resolution. We provide the first direct experimental evidences that D2R striatopallidal neurons inhibit both locomotor and drug-reinforcement processes and that D2R and D1R MSNs in different striatum subregions have distinct functions in motor control and motor skill learning. Those results strongly support a cell-type and topographic functional organization of the striatum and underscore the need for characterization of the specific cellular and molecular modifications that are induced in D2R and D1R MSNs during drug-reinforcement or procedural learning.<p> / Doctorat en Sciences médicales / info:eu-repo/semantics/nonPublished
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Chemotherapy, estrogen, and cognition : neuroimaging and genetic variationConroy, Susan Kim 25 February 2014 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / The time course and biological mechanisms by which breast cancer (BC) and/or alterations in estrogen status lead to cognitive and brain changes remain unclear. The studies presented here use neuroimaging, cognitive testing, genetics, and biomarkers to investigate how post-chemotherapy interval (PCI), chemotherapy-induced amenorrhea (CIA), and genetic variation in the estrogen pathway affect the brain. Chapter 1 examines the association of post-chemotherapy interval (PCI) with gray matter density (GMD) and working memory-related brain activation in BC survivors (mean PCI 6.4, range 3-10 years). PCI was positively associated with GMD and activation in the right frontal lobe, and GMD in this region was correlated with global neuropsychological function. In regions where BC survivors showed decreased GMD compared to controls, this was inversely related to oxidative DNA damage and learning and memory scores. This is the first study to show neural effects of PCI and relate DNA damage to brain alterations in BC survivors. Chapter 2 demonstrates prospectively, in an independent cohort, decreased combined magnitudes of brain activation and deactivation from pre-to post-chemotherapy in patients undergoing CIA compared to both postmenopausal BC patients undergoing chemotherapy and healthy controls. CIA’s change in activity magnitude was strongly correlated with change in processing speed, suggesting this activity increase reflects effective cognitive compensation. These results demonstrate that the pattern of change in brain activity from pre- to post-chemotherapy varies according to pre-treatment menopausal status. Chapter 3 presents the effects of variation in ESR1, the gene that codes for estrogen receptor-α, on brain structure in healthy older adults. ESR1 variation was associated with hippocampus and amygdala volumes, particularly in females. Single nucleotide polymorphism (SNP) rs9340799 influenced cortical GMD and thickness differentially by gender. Apolipoprotein E (APOE)-ε4 carrier status modulated the effect of SNP rs2234693 on amygdala volumes in women. This study showed that genetic variation in estrogen relates to brain morphology in ways that differ by sex, brain region and APOE-ε4 carrier status. The three studies presented here explore the interplay of BC, estrogen, and cognition, showing that PCI, CIA, and ESR1 genotype influence brain phenotypes. Cognitive correlates of neuroimaging findings indicate potential clinical significance of these results.
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Resveratrol augments paclitaxel treatment in MDA-MB-231 and paclitaxel-resistant MDA-MB-231 breast cancer cellsSprouse, Alyssa A. January 2014 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / Resveratrol has been shown to inhibit cell growth and induce apoptosis, as well as augment chemotherapeutics and irradiation in multiple cancer types. However, it is unknown if resveratrol is beneficial for treating drug-resistant cancer cells. To study the effects of resveratrol in triple negative breast cancer cells that are resistant to the common cancer drug, paclitaxel, a novel paclitaxel-resistant cell line was generated from the MDA-MB-231 breast cancer cell line. The resulting cell line, MDA-MB-231/PacR, exhibited a 12-fold increased resistance to paclitaxel but remained sensitive to resveratrol treatment. Resveratrol treatment reduced cell proliferation and colony formation and increased senescence and apoptosis in both the parental MDA-MB-231 and MDA-MB-231/PacR cell lines. Importantly, resveratrol treatment augments the effects of paclitaxel in both cell lines. The expression of the drug efflux transporter gene, MDR1, and the main metabolizing enzyme of paclitaxel gene, CYP2C8, was increased in the resistant cells. Moreover, pharmacological inhibition of the protein products of these genes, P-glycoprotein and CYP2C8, decreased paclitaxel resistance in the resistant but not in the parental cells, which suggests that the increase of these proteins are important contributors to the resistance of these cells. In conclusion, these studies imply that resveratrol, both alone and in combination with paclitaxel, may be useful in the treatment of paclitaxel-sensitive and paclitaxel-resistant triple negative breast cancers.
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An in vitro study of the mechanisms that underlie changes in neuronal sensitivity and neurite morphology following treatment with microtubule targeting agentsPittman, Sherry Kathleen 11 1900 (has links)
Microtubule targeting agents (MTAs) are chemotherapeutics commonly
used in the treatment of breast, ovarian, lung, and lymphoma cancers. There are
two main classes of MTAs based upon their effects on microtubule stability. The
two classes are the destabilizing agents, which include the drug vincristine, and
the stabilizing agents, which include paclitaxel and epothilone B. These drugs
are highly effective antineoplastics, but their use is often accompanied by several
side effects, one of which is peripheral neuropathy. Peripheral neuropathy can
be characterized by burning pain, tingling, loss of proprioception, or numbness in
the hands and feet. In some patients, the MTA-induced peripheral neuropathy is
debilitating and dose-limiting; however, there are no effective prevention
strategies or treatment options for peripheral neuropathy as the mechanisms
mediating this side effect are unknown. The goal of this work was to investigate
MTA-induced effects on neuronal activity and morphology in order to elucidate
the underlying mechanisms involved in the development of MTA-induced
peripheral neuropathy.
As an indicator of sensory neuronal activity, the basal and
stimulated release of the putative nociceptive peptide, calcitonin gene-related
peptide (CGRP), was measured from sensory neurons in culture after exposure to the MTAs paclitaxel, epothilone B, and vincristine. Neurite length and
branching were also measured in sensory neuronal cultures after treatment with
these MTAs. The results described in this thesis demonstrate that MTAs alter
the stimulated release of CGRP from sensory neurons in differential ways
depending on the MTA agent employed, the CGRP evoking-stimulus used, the
concentration of the MTA agent, the duration of exposure to the MTA agent, and
the presence of NGF. It was also observed that MTA agents decrease neurite
length and branching, independent of the concentration of NGF in the culture
media. Thus, this thesis describes MTA-induced alterations of sensory neuronal
sensitivity and neurite morphology and begins to elucidate the underlying
mechanisms involved in MTA-induced alterations of sensory neurons. These
findings will undoubtedly be used to help elucidate the mechanisms underlying
MTA-induced peripheral neuropathy.
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CaMKII regulation of astrocytic glutamate uptakeChawla, Aarti R. 19 May 2016 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / Glutamate clearance by astrocytes is an essential part of physiological excitatory
neurotransmission. Failure to adapt or maintain low levels of glutamate in the central
nervous system is associated with multiple acute and chronic neurodegenerative diseases.
The primary excitatory amino acid transporters (EAATs) in human astrocytes are EAAT1
and EAAT2 (GLAST and GLT-1 respectively in rodents). While the inhibition of a
ubiquitously-expressed serine/threonine protein kinase, the calcium/calmodulindependent
kinase (CaMKII) results in diminished glutamate uptake in cultured primary
rodent astrocytes, the molecular mechanism underlying this regulation is unknown. In
order to delineate this mechanism, we use a heterologous expression model to explore
CaMKII regulation of EAAT1 and EAAT2. In transiently transfected HEK293T cells,
pharmacological inhibition of CaMKII and overexpression of a dominant-negative
version of CaMKII (Asp136Asn) reduces [3H]-glutamate uptake by EAAT1, without
altering EAAT2 mediated glutamate uptake. Surprisingly, overexpression of a
constitutively active autophosphorylation mutant (Thr287Asp) to increase autonomous
CaMKII activity and a mutant incapable of autophosphorylation (Thr287Val) had no
effect on either EAAT1 or EAAT2 mediated glutamate uptake. Pulldown of FLAGtagged
glutamate transporters suggests CaMKII does not interact with EAAT1 or
EAAT2. SPOTS peptide arrays and recombinant GST-fusion proteins of the intracellular
N- and C-termini of EAAT1 identified two potential phosphorylation sites at residues
Thr26 and Thr37 in the N-terminus. Introducing an Ala (a non-phospho mimetic) but not an Asp (phosphomimetic) at Thr37 diminished EAAT1-mediated glutamate uptake,
suggesting that the phosphorylation state of this residue is important for constitutive
EAAT1 function. In sum, this is the first report of a glutamate transporter being identified
as a direct CaMKII substrate. These findings indicate that CaMKII signaling is a critical
driver of homeostatic glutamate uptake by EAAT1. Aberrations in basal CaMKII activity
disrupt glutamate uptake, which can perpetuate glutamate-mediated excitotoxicity and
result in cellular death.
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