The Wright fishhook cactus (Sclerocactus wrightiae L.D. Benson) is an endangered cactus species endemic to south-central Utah. Since its listing in 1979 by the U.S. Fish and Wildife Service, the potential impacts of soil disturbance by cattle have become a central focus of management policies and monitoring efforts. However, little to no empirical data has been collected to substantiate the hypothesis that soil disturbance by cattle has direct or indirect negative effects on Wright fishhook cactus growth or reproduction. Over the years, the Bureau of Land Mangement (BLM) and Capitol Reef National Park (CRNP) have invested significant resources documenting cactus populations including several attributes of individual cacti: GPS location, diameter, number of flowers, fruits, or buds, number of stems, and the presence or absence of a cow track within 15 cm of the cactus. While these efforts have been commendable, due to the defining phenological characteristics of this species (flower and filament color) and its short flowering period (April-May) it remains difficult to study and much basic biological information including a range wide population estimate and defined critical habitat remain unknown. Our research had two primary objectives, 1) evalutate the effects of soil disturbance by cattle on reproduction and diameter of the Wright fishhook cactus (Chapters 1 and 2), and 2) explore the use of drones and GIS to define critical habitat and obtain an accurate range wide population estimate (Chapters 3 and 4). In Chapter 1, we analyzed cactus attribute data collected by the BLM at 30 macro-plots representing different levels of soil related cattle disturbance (high, moderate, and low) from 2011-2017. We found no significant association between level of cattle disturbance and flower density or cactus diameter. We did find a significant negative association between flower frequency and increased disturbance. In Chapter 2, we conducted an experimental study where tracks were simulated within 15 cm of cacti at various levels (Ctrl, 1-Track, 2-Track, 4-Tracks, and 4-Tracks Doubled). No significant association was observed between the number of tracks and response in diameter, flower production, fruit production, or seed set. In Chapter 3, we conducted drone flights over 14 macro-plots at three different altitudes above ground level (10 m, 15 m, and 20 m) and found that while the 10 m flights provided the best remotely sensed survey results, drones are not a suitable replacement for ground censuses. In Chapter 4, we used Resource Selection Function to define critical habitat for the Wright fishhook cactus. Our modeling suggests that geology, elevation, and slope are significant factors in defining cactus habitat. Based on the results of our research we conclude that soil disturbance by cattle may not have a significant influence on Wright fishhook cactus populations or dynamics, and that accurate range wide population estimates may be best obtained through ground surveys within the predicted critical habitat.

The Wright fishhook cactus (Sclerocactus wrightiae L.D. Benson) is an endangered cactus species endemic to south-central Utah. Since its listing in 1979 by the U.S. Fish and Wildife Service, the potential impacts of soil disturbance by cattle have become a central focus of management policies and monitoring efforts. However, little to no empirical data has been collected to substantiate the hypothesis that soil disturbance by cattle has direct or indirect negative effects on Wright fishhook cactus growth or reproduction. Over the years, the Bureau of Land Mangement (BLM) and Capitol Reef National Park (CRNP) have invested significant resources documenting cactus populations including several attributes of individual cacti: GPS location, diameter, number of flowers, fruits, or buds, number of stems, and the presence or absence of a cow track within 15 cm of the cactus. While these efforts have been commendable, due to the defining phenological characteristics of this species (flower and filament color) and its short flowering period (April-May) it remains difficult to study and much basic biological information including a range wide population estimate and defined critical habitat remain unknown. Our research had two primary objectives, 1) evalutate the effects of soil disturbance by cattle on reproduction and diameter of the Wright fishhook cactus (Chapters 1 and 2), and 2) explore the use of drones and GIS to define critical habitat and obtain an accurate range wide population estimate (Chapters 3 and 4). In Chapter 1, we analyzed cactus attribute data collected by the BLM at 30 macro-plots representing different levels of soil related cattle disturbance (high, moderate, and low) from 2011-2017. We found no significant association between level of cattle disturbance and flower density or cactus diameter. We did find a significant negative association between flower frequency and increased disturbance. In Chapter 2, we conducted an experimental study where tracks were simulated within 15 cm of cacti at various levels (Ctrl, 1-Track, 2-Track, 4-Tracks, and 4-Tracks Doubled). No significant association was observed between the number of tracks and response in diameter, flower production, fruit production, or seed set. In Chapter 3, we conducted drone flights over 14 macro-plots at three different altitudes above ground level (10 m, 15 m, and 20 m) and found that while the 10 m flights provided the best remotely sensed survey results, drones are not a suitable replacement for ground censuses. In Chapter 4, we used Resource Selection Function to define critical habitat for the Wright fishhook cactus. Our modeling suggests that geology, elevation, and slope are significant factors in defining cactus habitat. Based on the results of our research we conclude that soil disturbance by cattle may not have a significant influence on Wright fishhook cactus populations or dynamics, and that accurate range wide population estimates may be best obtained through ground surveys within the predicted critical habitat.

Preservation of rare plant species often requires establishment of new populations. Survivorship surveys are the most common method of post-introduction monitoring. However, they provide an incomplete picture of establishment success. This study is an attempt to develop a model for determining establishment success by determining the factors affecting recruitment in introduced populations of a rare species. Erigeron decumbens is an endangered forb endemic to the Willamette Valley of western Oregon. Several populations of E. decumbens have been introduced by governmental and non-profit agencies. While there has been some monitoring of the survival of introduced plants, no systematic surveys have measured recruitment in the new populations. We monitored recruitment in five introduced populations, and compared abiotic and biotic characteristics in these and five stable natural populations. Seventy percent of introduced populations produced fewer than one recruit for every three survivors. Thirty percent produced at least one and one half recruits for every one survivor. The factors that affected recruitment were site specific. Low recruitment (less than one recruit per three survivors) was associated with dominance by exotic species (Dactylis glomerata, Rosa eglanteria, Vicia tetrasperma, and Leucanthemum vulgare), high litter cover, high soil electrical conductivity, and low silt levels. Recruitment was highest at sites with higher native plant species richness and soil characteristics falling within the variation of large natural populations. Viable seed number per individual had the strongest linear relationship with recruitment, demonstrating that seed viability could be a strong limitation for this species (r² = 0.83). The results of this study suggest numerous guidelines for future reintroductions of E. decumbens. This research also demonstrates the utility of recruitment surveys to determine factors important in the success of introduced populations of rare plant species. / Graduation date: 2013

The vast majority of terrestrial plant species live in symbiosis with arbuscular mycorrhizal fungi (AMF). AMF and plants live in complex networks, with roots of individual plants hosting multiple AMF, and single AMF colonizing multiple plants concurrently. Through the exchange of resources, the two partners of this symbiosis can have great effects on each other, effects which can ripple through both communities. What determines the patterns of associations between the partners is still largely unknown. In this dissertation, I examine a variety of factors, and in particular host identity, that could drive the community composition of AMF in roots. I began by surveying the diversity of AMF in roots of 12 plant species at a remnant bunchgrass prairie in Oregon, U.S.A. (Chapter 2). To do that, I first designed new primers for use in polymerase chain reaction (PCR) to specifically amplify DNA from all Glomeromycota species. Using those primers, I found 36 distinct AMF phylogenetic groups, or operational taxonomic units (OTUs) in the roots from the prairie. The proportion of OTUs in the basal order Archaeosporales was greater than in many other environmental surveys. I also conducted an in silico analysis to predict how effectively previously published primers would detect the whole diversity of OTUs I detected. I then assayed AMF community composition in the roots of 50 plants from nine plant species (Chapter 3). To do that, I designed primers specific to 18 of the OTUs detected in the initial field survey and used them to test for the presence of each OTU in the roots individual plants. I used that data to test if AMF community composition in individual roots correlated with host identity, spatial distribution, or soil characteristics. I found host identity was associated with both the richness and the structure of root AMF communities, while spatial distribution and soil characteristics were not. Finally, I performed an experimental test of the effect of host identity and community context on AMF community assembly (Chapter 4). I grew plants from four native perennial plant species, including two common and two federally endangered plants, either individually or in a community of four plants (with one plant of each species). I analyzed the AMF community composition in the roots of all plants after 12 weeks of growth with exposure to a uniform mix of field soil as inoculum. I found that host species identity affected root AMF richness and community composition, and community context affected AMF richness. Only one of the endangered species was highly colonized by AMF, and I did not detect unique AMF communities associated with it. This dissertation provides information on the diversity of AMF at a remnant bunchgrass prairie, an ecosystem which has been the subject of very few studies of AMF. Although a complex mix of factors interact to determine AMF community composition in roots, this work provides strong evidence that host identity plays a major role in that process. / Graduation date: 2013