Ihis work on the Sado outer estuary (western coast of Portugal) considers its bio-sedimentary characterization, and evaluates the prevailing hydrophysical and sedimentary environmental conditions. The quality status of the estuary is discussed. The thesis is based on the analysis of superficial sediments and benthic macrofauna collected from 133 sites, and on hydrodynamical data obtained from a mathematical model. The environmental variables considered were the superficial sediment temperature, granulometry and organic matter content, together with the water current velocities, flow and shear stress. The macrofaunal characterization and the analysis of the state of disturbance was based on a study of the composition, structure and spatial distribution of faunal assemblages and their relationship to the prevailing environmental conditions. The Sado was shown to be inhabited by an abundant and diversified fauna with high biomass. Two major faunal assemblages have been identified, a marine and an estuarine community, separated by a transition region. The estuarine community comprises the majority of the area and contains important subdivisions. The regions identified have been shown either to be controlled by anthropogenic inputs or to reflect mainly the effects of natural forces. The main structuring factors influencing the benthos are the hydrodynamic conditions, coupled with sediment type, and organic matter of natural and anthropogenic origin. Sedimentary organic enrichment effects have been noted in all the areas studied and in general the Sado outer estuary reveals signs of eutrophic conditions. In the more disturbed regions the macrofauna data also suggest chronic toxicity effects. Although disturbance effects due to anthropogenic inputs are suggested through the biosedimentary approach, the estuary as a whole can not be considered badly polluted. However, defaunated, impoverished and over-enriched areas, appear as a result of localised severe pollution indicating the need to improve effluent treatment systems. The methodological approach followed in this study has been shown to be effective in assessing the quality status of the Sado outer estuary. Multivariate and direct gradient analysis proved to be very useful methods and a detailed analysis of the macrofaunal species has been shown to be effective in the detection of organic enrichment effects in some of the areas. The extreme aspects of the gradients were identified by all the analytical techniques, but the univariate methods were shown to be poor at discriminating the more subtle effects.

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A high proportion of South Africa’s temporarily open/closed estuaries (TOCEs) occur along the coast of KwaZulu-Natal. Mouth breaching events have major impacts on the biological processes of an estuary, resulting in depletion of zooplankton via flushing and sediment scouring. Mouth closure, usually within weeks of a breaching event, initiates a new phase of stable physical conditions, leading to biological recovery. Therefore, the aim of this investigation was: (1) to monitor the recovery of zooplankton abundance and biomass following a breaching event in the Mdloti Estuary; (2) to compare the spatial and temporal patterns in zooplankton distribution in the lower (mouth), middle and upper reaches (head) of the Mdloti Estuary in terms of abundance and biomass just before, during and after a mouth breaching event; and (3) to determine the key environmental variables influencing zooplankton abundance and biomass during such a breaching event. The zooplankton community of the Mdloti Estuary was studied over a 3-month period (27 January to 26 April 2004). The estuary was artificially breached on 12 February 2004, due to a fish kill, and closed again naturally on 18 March 2004. Samples were collected twice a week in the lower, middle and upper reaches using a WP-2 net and an epibenthic sled. Upon breaching, 98% of zooplankton biomass was lost through sediment scouring and flushing. During the open phase, zooplankton biomass showed a temporary recovery, but due to continual sediment scouring and flushing, this was not sustained. One-way ANOVA revealed a significant difference in total zooplankton abundance and biomass between phases (d.f.2, 59 = 55.0; p < 0.001; d.f.2, 59 = 15.51; p < 0.001). ANCOVA revealed significant differences between zooplankton abundance and biomass (d.f.0.05;2,56=2.97, p = 0.05) at the different estuarine reaches (d.f.0.05;2,56=5.51, p < 0.01) . In both cases, the lower reaches recovered quicker than the middle and upper reaches. Thirty-five taxa were identified during the study, with only 10 contributing more than 1% of the total abundance or biomass. For the overall study, P. hessei was the dominant species, accounting for 42% of the total abundance and 58% of the total biomass. Keratella sp. 1 accounted for 17% and 11% of the total abundance and total biomass, respectively, while harpacticoid copepodites and Acartia natalensis contributed 11% and 10% to the total zooplankton abundance and 3% and 7% to the total zooplankton biomass, respectively. Pre-breaching levels of zooplankton were reached only 9 days after the closure of the mouth, during the recovery phase (mean 1.1 x 105 ± 6.5 x 104 SD ind.m3 and 2.4 x 102 ± 1.6 x 102 SD mg.m3). Zooplankton abundance and biomass reached a peak in the lower reaches after 19 days, in the upper reaches after 28 days and in the middle reaches after 35 days. The zooplankton biomass decreased slightly, but stabilised for the duration of the study. During the study the state of the mouth was primarily responsible for regulating the zooplankton abundance and biomass. However, the zooplankton in the different reaches did not recover in synchrony after mouth re-closure because abiotic factors and food availability were different in the three estuarine reaches. / Thesis (M.Sc.)-University of KwaZulu-Natal, Westville, 2010.

Estuaries are complex ecosystems, typified by remarkable fluctuations in environmental conditions. In addition to this natural variability, stochastic events and anthropogenic influences effect change at different spatial and temporal scales. Macrozoobenthic invertebrates are preferable biological indicators because of their sensitivity to variations in habitat quality. This thesis describes inherent changes in the macrozoobenthos of temporarily open/closed estuaries (TOCEs) in KwaZulu-Natal, ‘change’ as measured in spatial and temporal community differences using various community metrics, namely species composition, abundance and diversity. Standard and widely published quantitative sampling techniques were employed, with simultaneous measurements of ambient physico-chemical conditions, including sediment characteristics. The thesis is in three parts. Regional distributions and long-term decadal-type changes in macrozoobenthic community structure were determined for 31 TOCEs using historical data (1998/9) compared with more recently collected data (2009/10). Results showed that, although of the same estuary type, the macrozoobenthic communities of these estuaries differed significantly. Furthermore, community composition did not reflect a north to south progression of predominantly tropical species to predominantly warm-temperate species. In the last decade, the macrozoobenthos of these systems had indeed changed (in composition, abundance and/or diversity), the scale of change within each estuary being estuary-dependent. The recolonisation of two urban and non-urban estuaries by macrozoobenthos following a stochastic flood disturbance was investigated, describing the short-term community changes during the recovery process. Differential recolonisation patterns were attributed to inherent differences in community composition and not to the influence of urbanisation. Recolonisation was marked by distinct changes in community structure, with the recovery trajectory being interrupted by localised disturbances (e.g. change of mouth state). Species indicative of the observed spatial and temporal community changes were examined for similarities in habitat association and trophic characteristics. The species that were representative of these KwaZulu-Natal TOCEs were identified and included common and highly abundant generalists of varying trophic groups. In conclusion, the present findings illustrated the effectiveness of using macrozoobenthic communities to depict ‘change’ over multiple temporal and spatial scales. This also supports their usefulness as a study group in environmental monitoring and detecting the loss of ecological functioning and biodiversity in estuaries in the long- and short-term. / Thesis (M.Sc.)-University of KwaZulu-Natal, Westville, 2011.

ln this study the exploitation of the fish fauna of the Kosi estuarine system by man and natural predators is described and estimates made of the off-take and its species composition. The most important human exploitation, that by the traditional Zulu fish traps, was monitored over a four year period and the data collected were used to give an insight into the marine fish populations of the system. All the physical parameters, which it was thought could influence the migrations of fish, were monitored and correlations between these and the daily and monthly fish trap catches were used to interpret fish movements into and out of the system. Reasons for the annual migrations and day to day movements of fish were investigated. In order to establish relative off-takes by local fishermen and sport anglers fish were tagged inside the system and the recovery rates by the various fishing methods were used to calculate estimates of the percentage off-takes of these principal human exploitation methods. These data were also used to obtain estimates of the population sizes of the major marine fish species inside the system. Catch data were used to indicate the levels of estuarine dependence of these species. Where possible comparable data from other areas were used to indicate whether or not similar trends in catch abundance were obvious. The ecological and economic importance of the Kosi system is discussed and its value to the local inhabitants stressed. Competition between the various fishing techniques is described and recommendations are made concerning future fish exploitation. Natural predation rates are also discussed and levels compared with those of other systems. The fish food resources of the systems are considered in the light of recently declining salinities, destruction of swamp forests and increasing numbers of hippopotami. The implications of these changing factors are discussed as is their impact on the Kosi Bay fisheries. / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 1986.

The influence of sedimentary variables on the structure and function of infaunal estuarine and marine communities is well studied but less is known of the influence of biota on sediment properties. Feeding and burrowing activity, locomotion, the production of faecal pellets and biological secretions (bioturbation) have important implications for sediment structure, chemistry, transport characteristics and the flux of nutrients and contaminants. Although spatial and temporal patterns in bioturbation have been studied to some extent, little attention has been given to the effects of pollution. The present study examines the effects of an intertidal petrochemical discharge into the Humber estuary (UK), from BP chemicals (Saltend) Ltd on the structure and function of the communities. Field and laboratory techniques were used to determine the effects of community change on bioturbation potential. In addition, a laboratory flume was constructed to measure sediment erosion potential with field measurements being taken using a Cohesive Strength Meter (CSM). The physico-chemical properties of the sediment, changes to the infaunal community structure, bioturbation potential and the interaction of these variables were used to explain differences between the erosion potential of sediments subject to varying levels of contamination. The main study was carried out on the Saltend mudflats near Hull, with sites at various distances from the outfall being used. A further set of control sites on the adjacent, and largely unaffected, mudflat at Paull were also used. In terms of the sediment properties, sites closest to the outfall showed the greatest degree of anoxia and the highest chlorophyll-a and carbohydrate concentrations, with all three parameters being seasonally influenced. No consistent spatial or temporal patterns were found for any of the other parameters (water and organic content, particle size). Whilst the infaunal communities were characteristic of estuarine areas, macrobenthic community response followed the Pearson & Rosenberg (1978) model for organic discharges with high abundance and low species diversity being associated with the more polluted sediments. Close to the discharge, there was an impoverished community consisting predominantly of highly abundant oligochate worms. With increasing distance from the outfall, species diversity and biomass increased with Hediste diversicolor becoming increasingly dominant and the appearance of Corophium volutator, Streblospio shrubsolii and Macoma balthica. Bioturbation potential was significantly reduced (in terms of depth and burrow volume and density) by increasing effiuent concentrations and with proximity to the discharge. The diversity of both feeding and sediment modification guilds was also reduced as a result of the discharge. Both field and laboratory studies indicated a stabilising effect of this type of pollution. Using the CSM, critical shear stress values were found to be significantly lower from unpolluted sites, indicating higher erosion potential, than those from sites close to the discharge. As a result of this, the total mass of sediment eroded from unpolluted sites was significantly higher than that from polluted areas. A similar trend was observed in the laboratory with sediments treated with an effluent concentration of 32% being considerably more stable than untreated sediments. Flume studies also indicated the stabilising effect of pollution with suspended particulate matter (SPM) concentrations and mass of sediment being transported as bedload being significantly higher for unpolluted sediments. These differences in erosion potential were attributed to the direct effects of the effiuent on the physico-chemical properties of the sediment, the effects of the effiuent and sediment type on macrofaunal community structure and function and the differences in bioturbation potential between sites. The implications of these findings in the wider context of coastal management are discussed.

Various aspects of metabolism and physiology were investigated during the ontogeny of yellowtail kingfish (Seriola lalandi), a fish of growing aquaculture importance in both New Zealand and other countries. Incubation experiments between 18-24°C showed that developing eggs and larvae were heavily influenced by temperature. It appeared that at warmer temperatures larvae hatched smaller but grew on the yolk sac, whereas at cooler temperatures larvae grew inside the chorion. Oxygen consumption data supported this, with a negative correlation found between total embryonic oxygen consumption and temperature. A mechanism was proposed to explain the differential effect of temperature on ontogeny and growth. Like other marine fish with pelagic eggs, yellowtail kingfish were found to be heavily reliant on free amino acids as a source of energy. At 23°C the pattern of substrate utilisation in eggs was considerably different from that at 17-21°C, indicating that 23°C exceeded the tolerance for normal development. Inter-individual aggression by large individuals was associated with the development of size heterogeneity in juveniles. Although this aggression also affected the survival of smaller juveniles, it was not the primary agent of much of the mortality that occurs during this phase, as many of these individuals were on a degenerate developmental trajectory. Yellowtail kingfish fingerlings used for ongrowing were robust to the stressors imposed by live transport. The ontogenetic development of metabolic rate from 0.6 mg-2.2 kg did not follow the same scaling exponent as that observed for mammalian models of allometry, and has implications for interspecific studies of mass-dependent metabolism.

Typescript. / Bibliography: leaves [208]-221. / xix,, 221 leaves illus., maps, tables 28 cm

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