Tong Chun Wah. / "Architecture Department, Chinese University of Hong Kong, Master of Architecture Programme 2010-2011, design report."

The main objective of this thesis was to gain new insights in three of Florida’s high value food and stock enhancement finfish nutrition (Common snook, Florida pompano and red drum) to improve larviculture protocols. The main bottleneck in snook production is the extremely low larval survival rate, which hinders subsequent research. This work first focused on the source of the larvae by looking at potential nutritional deficiencies in captive broodstock. The lipid composition of wild and captive common snook broodstock were compared to identify disparities and gain the information necessary for the formulation of a suitable diet for captive stocks. Results showed that captive snook lipid content was significantly higher than that of wild fish. However, cholesterol and arachidonic acid (ARA) levels were significantly lower compared to wild broodstock, with potential impact on steroid and prostaglandin production, reproductive behavior and gametogenesis. Eggs from captive broodstock incorporated high docosahexaenoic acid (DHA) and eicosapentaenoic acid (EPA) levels and low ARA levels. Consequently, ARA/EPA ratio in captive eggs was more than half of that in wild eggs (2.3 ± 0.6 and 0.9 ± 0.1 respectively), with a probable perturbation in eicosanoid production and adverse effects on embryo and larval development. The large differences observed between wild and captive broodstock most likely contributed to the reproductive dysfunctions observed in captive snook broodstock (e.g. incomplete oocyte maturation, low milt production and poor egg quality). In addition, the presence of hydrocarbons was detected in the liver of most of the wild snook sampled. This requires further investigation to identify the source of the contamination, monitor a potential impact on reproductive performances and protect the species habitat. Another major bottleneck in marine fish rearing occurs during the transition from endogenous feeding to exogenous feeding, with mass mortality events linked to inadequate first feeding diets. To gain insight on the early fatty acid requirements and mobilization of pompano and snook larvae, the pattern of conservation and loss of fatty acids from the yolk sac during the endogenous feeding period and subsequent starvation was studied. In both species, fatty acids were utilized as an energy source after hatching. Mono-unsaturated fatty acids were catabolized, while saturated and poly-unsaturated fatty acids were conserved. High levels of arachidonic acid (ARA) in pompano and snook eggs (respectively 2.44 ± 0.1 and 5.43 ± 0.3 % of total fatty acids), as well as selective retention in the unfed larvae, suggested a high dietary requirement for this fatty acid during the early stages of larval development. The effect of an ARA supplementation was therefore investigated in snook larvae at the rotifer feeding stage. Larvae receiving the supplementation did incorporate higher levels of ARA, and DHA/EPA and ARA/EPA ratios were successfully modified to match those observed in wild eggs. No significant improvements in growth or survival were observed, however the success in fatty acid profile modification suggest a possible impact of the supplementation on a longer period of time and a possible effect on stress resistance. Probiotics have been shown to enhance larval performances of several species and this strategy was therefore investigated to evaluate a potential impact on Florida pompano, red drum and common snook larvae. The effect of a commercial mix of Bacillus sp. was studied on larval survival, growth and digestive enzyme activities. Larvae were fed either live feed enriched with Algamac 3050 (Control), Algamac 3050 and probiotics (PB), or the previous diet combined with a daily addition of probiotics to the tank water (PB+). Microbiological analyses were performed at the end of the pompano trial. Numbers of presumptive Vibrio sp. were low and not statistically different between treatments, therefore no additional microbiological analyses were performed on the system. At the end of the pompano and snook trial, standard lengths of larvae from the PB and PB+ treatments were significantly greater than for the control larvae. For both pompano and snook, trypsin specific activity was higher in PB and PB+ larvae compared to the control larvae. Similarly, alkaline phosphatase activity was higher for the pompano larvae fed the PB and PB+ treatments and for the snook larvae fed the PB+ treatment compared to the control larvae. No enhancement of growth or digestive enzymes activities was observed in red drum larvae. Yet, no negative effects were noticed and a longer trial period and the study of additional parameters could reveal different effects. In all three species, survival was not affected by the supplementation; however, stress exposure should be further investigated as the supplementation may strengthen the larvae, especially pompano and snook larvae where the Bacillus sp. supplementation appears to promote growth through an early maturation of the digestive system. Another key challenge in marine fish larval rearing resides in weaning the larvae onto dry micro-diets. This step is commonly concurrent with larvae metamorphosis into juveniles, with extensive morphological and physiological changes that are likely to influence nutritional requirements. In the present project, three microdiets were tested on weaning of Florida pompano larvae: Otohime, Gemma and a reference diet LR803. The experimental system was stocked with 11-day-old larvae, which were co-fed micro-diets and live food from 11 dph to 17 dph then micro-diets only until 28 dph. Survival from 11 dph to 28 dph was similar for all treatments, with an average of 33 %. At the end of the trial, the Gemma larvae were significantly longer and heavier than larvae fed the other diets. Fatty acid composition of the diets and larvae varied significantly between treatments. The Gemma larvae incorporated the lowest amount of eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA) and arachidonic acid (ARA). However, they presented the highest DHA/EPA and ARA/EPA ratios, supporting the concept that the proportions of polyunsaturated fatty acids are of greater importance than their absolute amount. Results from the enzyme analysis showed that fishmeal is a suitable main source of protein for Florida pompano larvae and demonstrated the full functionality of the pancreas at 16 days post hatch. These results provide the basis of a suitable weaning diet for pompano larvae and indicate the possibility of a weaning time prior to 16 days post hatch, which is of high interest in commercial production. Overall, this research provides new data on common snook, pompano and red drum nutritional requirements with results that can be directly applied to help overcome major bottlenecks in the hatchery phase and improve rearing protocols.

Advances in aquaculture technologies are being investigated to support the replenishment of local fisheries, develop marine food fish farming opportunities and to increase seafood production globally. In order to promote the expansion and development of aquaculture technologies required to raise new finfish species, a number of key bottlenecks restricting commercial-scale culture need to be addressed, including the ability to control fish reproduction in captivity and to produce high quality seeds. One candidate species for large-scale production, and the focus of this work, is common snook. Prized as a food fish in Mexico, Central and South America and as a popular game fish along the Gulf coast of the United States; common snook are economically important having both a high market value and recreational demand. Despite recent advances in captive spawning, a number of reproductive bottlenecks still need to be addressed such as lack of spontaneous spawning in captivity, poor fertilization rates and inconsistent production of high quality eggs and larvae. Therefore, the overall aim of this thesis was to better understand the reproductive biology of common snook in order to develop protocols to improve the reliability of captive spawning in closed recirculating aquaculture systems and the quality of eggs produced as a basis for commercial scale cultivation. First, this PhD project described oocyte development in common snook and validated a non-invasive method for assessing reproductive condition in wild and captive stocks (Chapter 2). This was done by using a tiered and adaptable staging scheme to compare the wet mount technique with histological preparations of ovarian biopsies. When compared with histology, the wet mount provided an immediate and precise method for determining whether female broodstock were candidates for hormonal induction. In fishery biology, an understanding of fish reproductive success and population reproductive potential is critical for designing and implementing effective fisheries management strategies. The wet mount technique provides a tool for non-lethal, low-cost determination of reproductive status in wild fish stocks. The next research chapter focused on spawning induction of captive snook populations. The first trial compared the effects of slow and regular release GnRHa implants whereas the second trial investigated the effects of GnRHa, alone or in combination with the dopamine antagonist, pimozide (PIM), on milt characteristics and plasma steroid levels in captive male common snook broodstock (Chapter 3). In an effort to better enable reliable control of reproduction under captive conditions, the annual plasma sex steroid profile of captive male and female broodstock maintained under natural photo-thermal conditions was also examined. When possible, milt samples were collected pre and post implantation; sperm density, sperm motility and spermatocrit were documented among individual males. The assigned treatments appeared to have no or little effects on milt production in male broodstock although plasma steroid levels were found to be significantly elevated in individuals treated with GnRHa in combination with the dopamine antagonist, pimozide. At the time this work was performed, no data on spawning dynamics, including individual spawning performance, had been reported for common snook in captivity. Mass spawning tanks are complex systems where fish are left to spawn naturally and fertilized eggs are collected with little or no control over the mating of the animals. Therefore, the third part of this thesis explored the potential of DNA profiling for monitoring mating outcomes in captive broodstock by employing eight microsatellite markers to detect and quantify individual parental contributions for 2,154 larvae obtained from the three broodstock tanks (Chapter 4). The panel of loci was generally robust and allowed unambiguous assignment of 89% of larvae to a single family. Overall, spawn contribution data 1) provided a confirmation of GnRHa treatment efficacy in female snook with a minimum stage of oogenesis (late secondary growth-SGl) required for successful spawning, 2) identified a potential impact of handling on maturation and spawning of captive broodstock and 3) confirmed that, through photothermal conditioning, captive broodstock can spawn over consecutive days and several times per year including outside of their natural spawning season. The exogenous cues that tropical species use to synchronize key life events like reproduction remain largely unstudied, therefore, my PhD project also investigated the influence of tidal cycle on reproductive activity in common snook (Chapter 5). Real-time quantitative RT-PCR assays were developed and validated to measure the temporal expression patterns of gonadotropin genes (fshβ and lhβ) during the reproductive cycle in males and females. These were evaluated in relation to sex steroid production, LH blood plasma levels, gonadal development and tidal cycle. The phylogenetic analysis of the deduced amino acid sequence of common snook for fshβ and lhβ revealed strong identity with other teleosts (75-90%). Additionally, the mRNA profiles of fshβ and lhβ in the pituitary of females displayed a clear pattern of expression concomitant with histological changes in oocyte development. Histological observations of gonads suggested a circa-tidal rhythm of follicular development. The findings, as a whole, provided new information supporting the role of tidal cycle on the entrainment of gametogenesis allowing for a better understanding of the environmental control of reproduction in common snook. Although the primary research emphasis in this PhD was on broodstock spawning and gamete quality, the final chapter focuses on larval ontogeny. The goal of this research was to gain improve understanding of the early life history characteristics of common snook in order to improve larval culture technologies. To do so, a combination of digital photography and histological techniques were used to document the embryonic and early larval development (0 to 14 days post hatch-DPH) of hatchery-reared individuals (Chapter 6). Larvae hatched 15 h after fertilization at 28°C, lacked pigmentation, had a rudimentary digestive tract and undeveloped visual system. Development was rapid and by 3 DPH larvae had almost doubled in length, the yolk sac was nearly exhausted, the mouth was open and eyes were pigmented with a well-structured retinal layer. The alimentary canal was differentiated into three distinct sections including the foregut, midgut and hindgut. Food was observed in the gut (rotifers) and structural epithelium organelles, such as the nucleus, mitochondria, and dark vesicles, were all present in high numbers. The swim bladder was formed and inflated. In summary, understanding early ontogenetic development in common snook can help provide information needed to address key bottlenecks seen in captive cultivation, such as the high incidence of larval mortality observed during the transition from endogenous to exogenous feeding. Overall, this doctoral work 1) validated molecular and endocrine analytical tools for future studies of common snook reproductive physiology, 2) provided a better understanding of both broodfish requirements in tank systems as well as the endocrine control of reproduction and spawning at the level of the brain-pituitary-gonadal axis, 3) increased our knowledge in genetic management of captive broodstock, in terms of parentage assignment and 4) offered new insight into wild population reproductive strategy as well as how reproduction is entrained through environmental cues and the pathways leading to oocyte recruitment and maturation. The new information presented here can be used to conserve wild snook stocks through production of farm raised individuals as a sustainable source of seafood and for fisheries enhancement.

Thesis (MscAgric (Animal Sciences))--University of Stellenbosch, 2006. / The development of basic husbandry techniques and determining basic performance parameters are among the first steps towards culturing a new species. Silver kob, Argyrosomus inodorus, is a large Sciaenid and endemic to South Africa and Namibia and has been selected as a candidate aquaculture species. However, the proposed culture raises many questions, with two of them being the adaptability to captive conditions and product quality in the captive raised fish. To address these, trials were set up with eighty-three silver kob, divided into three ponds and fed three different diets. The effects of the diet on performance and quality were determined over a nine month trial period. The fish fed the pilchard diet adapted faster to the captive conditions than the fish fed the artificial diets. The growth of these fish were also markedly better than that of the fish fed the artificial diets, although after the adaptation period, the growth rate of the fish fed the artificial diets surpassed that of the fish fed the pilchards. Fifteen fish, five from each treatment were sacrificed and compared on a chemical and sensory level to wild-caught fish (control, n=6). Differences (p≤0.05) were noted in the total lipid content and fatty acid composition between the fish fed the different diets and the control. Sensory analysis revealed that the fish fed pilchards differed (p≤0.05) from the other groups by having an undesirable odour and flavour. The body partitioning and the proximate chemical composition of silver kob were determined. The length-weight relationship for silver kob raised in captivity was determined and a b-value of 3.32 was obtained, which indicates allometric growth with the fish becoming more rotund as their length increases. The results of these trials indicates that silver kob, A. inodorus adapts in captive conditions. The final product also compares favourably to wild-caught fish. The use of digital image analysis as a method of determining fish condition was also assessed with promising results for future application in research and production systems.

published_or_final_version / abstract / Biological Sciences / Master / Master of Philosophy

M.Sc. (Zoology) / Please refer to full text to view abstract

The effect of parasitism on the individual, and on a population, is one of the least understood and poorly studied areas of fish ecology. Parasites compete for maternal energetic reserves required for the production of viable eggs and offspring; thus parasites can directly influence population dynamics by lowering the number of offspring that survive to produce. The goal of this work was to explore the effect of parasitism on the reproductive potential of fish. Traditional measures of somatic energy reserves and body condition were examined along with newer measures of fatty acids present in eggs to approximate reproductive potential. Eighty female common snook, Centropomus undecimalis, were collected during spawning season (mid April to mid October) from four spawning aggregations along the southeastern coast of Florida and examined for a suite of biological, reproductive, and parasite infection measures. General linear models were used to model somatic indices, body condition, fatty acid composition and the ratios of fatty acids in eggs as a function of parasite infection parameters, host age, capture location, capture month and year. All fish were included in the somatic indices and body condition analysis while a subset of 40 fish were used in the analysis on fatty acid composition and the ratios of fatty acids in eggs. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2015. / FAU Electronic Theses and Dissertations Collection

Made available in DSpace on 2015-04-22T22:17:22Z (GMT). No. of bitstreams: 1 monica.pdf: 608033 bytes, checksum: 3fa66bc7ae8660b874f2062bab1562d2 (MD5) Previous issue date: 2010-11-04 / Tambaqui (Colossoma macropomum) is a naturally occurring fish in the Amazon basin, stands out for its remarkable potential to contribute to the regional economy and its wide acceptance in the consumer market. However, one of the contributory factors to reduce the potential for consumption and export is due, in many cases, lack of infrastructure, improper handling since harvest until storage and the inadequate storage directly influencing the raw material quality, resulting the lifetime decreasing for its consumption and marketing. This study aimed to determine the proximate composition and cuts yield of in natura cultivated tambaqui; to determine the influence of frozen storage time on the cuts (rib, tenderloin and flitch) quality through sensory, physicochemical and microbiological analyses during 180 days of frozen storage at -25°C in plastic polyethylene; and the cut type x shelf-life relation. The sensory evaluation of the physical characteristics showed that the quality of analyzed tambaqui cuts remained excellent throughout the experiment. The pH determination, the Total Volatile Basic Nitrogen (TVB-N) and the Thiobarbituric Acid Reactive Substances (TBARS), as well as the microbiological analyses have proved as good indices for freshness evaluation along storage time. Thus, the results allowed concluding that the cut rib was more susceptible to oxidation due to its high fat content, which limits its shelf-life. However, the tambaqui cuts remained appropriate for consumption during 180 days of frozen storage at -25°C in plastic polyethylene, in conditions of correct handling and using good hygiene practices between harvest and storage. / O tambaqui (Colossoma macropomum), peixe de ocorrência natural da bacia amazônica, destaca-se pelo seu notável potencial de contribuição para economia regional e grande aceitação no mercado consumidor. No entanto, um dos fatores contribuintes para redução de seu potencial para consumo e exportação se deve, em muitos casos, a ausência de infraestrutura, manipulação incorreta entre a colheita e armazenamento e estocagem inadequada influenciando diretamente na qualidade da matéria-prima, acarretando diminuição do tempo de vida útil para o seu consumo e comercialização. O objetivo do presente trabalho é determinar a composição centesimal e rendimento dos cortes de tambaqui de cultivo in natura; determinar a influência do tempo de congelamento na qualidade dos cortes (costela, lombinho e posta) por meio de análises sensoriais, físico-químicas e microbiológicas, estocadas durante 180 dias a -25oC e a relação tipo de corte x vida útil. A avaliação sensorial mostrou que os cortes de tambaqui analisados permaneceram com qualidade excelente durante todo o experimento. A determinação do pH, do Nitrogênio das Bases Voláteis Totais (N-BVT) e Substâncias Reativas ao Ácido Tiobarbitúrico (TBARS), assim como os resultados das análises microbiológicas se revelaram como bons índices de avaliação do frescor ao longo do tempo de estocagem. Deste modo, os resultados obtidos permitiram concluir que o corte de costela mostrou-se mais susceptível a oxidação decorrente de seu alto teor lipídico, o que limita o seu tempo de vida útil. No entanto, os cortes de tambaqui mantiveram-se adequados para o consumo durante o período analisado em embalagem plástica de polietileno, em condições de manipulação correta e com uso de boas práticas de higiene entre a colheita e o armazenamento.

This thesis examined the influence of fall-spawning coho salmon on the density, growth rate, body condition, and survival to outmigration of juvenile coho salmon rearing in beaver ponds on the Copper River Delta, Alaska. During the fall of 1999 and 2000 fish rearing in ponds that received spawning salmon were compared to ponds that did not receive spawners, and to ponds that were artificially enriched with salmon carcasses and eggs. Juvenile coho salmon responded variably to fall-spawning salmon. There were no consistent patterns associated with the two naturally occurring pond types (spawning vs no spawning). In some ponds, fall-spawning salmon increased growth rates and improved the body condition of juvenile coho salmon. Enrichment with salmon carcasses and eggs significantly increased growth rates of fish in non-spawning ponds. For some ponds, the relative influence of spawning and enrichment on body condition depended on fish size. There was no evidence that the influence of fall-spawning resulted in greater smolt production. Fall-spawning salmon provide important food resources that can benefit juvenile coho salmon rearing in beaver ponds on the Copper River Delta. However, other factors such as nutrients from riparian vegetation and catchment characteristics that control hydrology and thermal regimes are important to coho salmon smolt production. / Graduation date: 2004

Lack of affordable feeds is one of the major constraints facing small-scale fish farmers in Tanzania. This study evaluated the suitability of moringa leaf meal (MLM), cassava leaf meal (CLM) and cassava root meal (CRM) as novel ingredients in Nile tilapia, Oreochromis niloticus diets. Each of the ingredients was processed in an attempt to remove the most significant antinutritional factor. A series of five experiments was conducted in a recirculation system using juvenile O. niloticus. The fish were fed isonitrogenous (30g 100g-1), isolipidic (10g 100g-1) and isoenergetic (18 kJ g-1) diets containing graded levels of the processed ingredients to their apparent appetite but not exceeding 10% of their body weight for a period of 8 weeks. Processing led to the removal of 0.3% of saponin from MLM and 60% and 90% of hydrogen cyanide from CLM and CRM respectively. The contents of other inherent antinutritional factors such as phenols, tannins and phytic acid were little affected. Processed MLM, CLM and CRM had 31.1/29.0/1.5g 100g-1 of crude protein, 5.9/10.2/2.4g 100g-1 of crude fibre and 20.1/19.7/15.8k Jg-1 of gross energy. The content of sulphur amino acids was higher in CLM (0.47%) than in MLM (0.23%). Digestibe protein and digestible energy was higher in MLM (25.71g 100g-1/15.44kJ g-1) than in CLM (12.71g 100-1/9.16kJ g-1). CRM had a digestible energy content of 13.5kJ g-1. Inclusion of either of the leaf meals, even at the lowest level of 15g 100g-1 of total dietary protein, led to a significant reduction in feed intake, growth and feed utilisation. Liver and small intestine did not show any histopathological changes which could be linked to dietary treatment. Conversely, cassava root meal could replace up to 75% of wheat meal in the diet without significantly affecting performance. The performance of leaf meals was marginally improved by a combination of blending and feeding stimulants, whereby a blend containing 1 part MLM and 2 parts CLM could provide up to 20g 100g-1 of dietary protein without significantly reducing performance. Biological and economic performance of practical diets containing 30-50g 100g-1 of dietary protein from moringa and cassava blends (LMB) with feeding stimulants was significantly lower than a fishmeal-meal based diet (FM) but comparable to a soybean meal-based diet (SBM). The suitability of MLM and CLM as novel protein sources in O. niloticus diets will depend on 1) improving reduction/removal of inherent antinutritional factors in MLM and CLM as well as improving digestibility of CLM. On the other hand, the suitability of CRM as a carbohydrate energy source will depend on the availability of cost effective protein sources due to its low protein content.