This thesis focuses on the development of a novel nucleophilic ¹⁸F-fluorination of (hetero)arenes and of a rapid screening experiment to facilitate the application of this reaction to complex heterocyclic targets of medicinal importance. <strong>Chapter 1</strong> introduces the use of molecules labelled with fluorine-18 as tracers in positron emission tomography and reviews methods for the preparation of [¹⁸F]fluoroarenes published prior to the start of the work in this thesis. <strong>Chapter 2</strong> describes the development of a novel method for the preparation of electronically-diverse [¹⁸F]fluoroarenes from aryl boronic esters and [¹⁸F]fluoride, mediated by a copper complex. Application of this ¹⁸F-fluorodeboronation to electron-rich radiotracers is demonstrated. Methods for the preparation of [¹⁸F]fluoroarenes published after the start of the work in this thesis are reviewed. <strong>Chapter 3</strong> outlines a rapid screening experiment for assessing the tolerance of the ¹⁸F-fluorodeboronation towards heterocycles, and the use of this method to guide the retro-radiosynthesis of heterocycle-rich, medicinally relevant molecules. <strong>Chapter 4</strong> contains synthetic procedures and characterisation data for compounds in Chapters 2 and 3.

A series of fluorinated LiCoO2 compounds, LiCoO2−xFx with x = 0.05 − 0.65, were synthesised by both a sol-gel and a solid-state method. The sol-gel method utilises LiNO3 and Co(NO3)2.6H2O as Li and Co sources respectively, water and 1-butanol as solvent for the fluoride precursor LiF, and citric acid as the chelating agent. The prepared materials were compared using pXRD, SEM, Raman, TG and DTA analyses. pXRD revealed a secondary phase appearing at x= 0.25 in materials prepared by the sol-gel method and as early as x= 0.08 in materials prepared by the thermal solid-state method. Materials prepared by the thermal solid-state method required higher temperatures and longer times than materials prepared by the sol-gel method. The results showed that more fluorine can be incorporated in the LiCoO2 structure by the sol-gel than the solid-state method. The secondary phase was identified as lithium oxydifluoride, LiCoOF2. Relatively pure material with stoichiometry could be prepared by both methods. The space was determined as either 𝐶2 or 𝑃1 and the unit cell dimensions for the two alternatives are reported. This secondary phase has been reported in the literature, but had not been positively identified at the time of submission of this dissertation. Keywords: fluorinated LiCoO2; LiCoO2−xFx; sol-gel fluorination; solid-state fluorination; lithium oxydifluoride. / Dissertation (MEng)--University of Pretoria, 2017. / Chemical Engineering / MEng / Unrestricted

Thesis (MSc (Chemistry and Polymer Science))--University of Stellenbosch, 2007. / Human African Trypanosomiasis (HAT) is a disease that threatens more then 60 million men, woman and children in Africa. It is known that the inhibition of the enzyme, ornithine decarboxylase (ODC) leads to cell arrest and subsequent death of Trypanosoma brucei, the parasite that causes the disease. The fluorinated ornithine analogue, DFMO (difluoromethylornithine or eflornithine) is a known inhibitor of ODC. Although various syntheses for DFMO exist they have some practical drawbacks which prevent the cost effective production of this compound as a drug for HAT treatment. This work focuses on the synthetic preparation of the fluorinated ornithine analogue DFMO as well as the fluorinated ornithine analogues 2-MFMO, 3-fluoro-ornithine and 3,3-difluoro-ornithine. Our chosen synthetic methodology focused on the introduction of the fluorine functionality using a simpler, safer and more convenient method than current direct fluorination techniques, or those that rely on the use of CFCs. Instead we decided to develop and optimise a fluorodehydroxylation method based on the transformation of hydroxylated ornithine analogues. The fluorodehydroxylation method substitutes a hydroxyl group to the corresponding fluorine and can also be used to transform an aldehyde or ketone to the corresponding difluoro group. Application of this fluorination method requires the synthesis of appropriate ...

Environmental and safety concerns have prompted an active quest for ―green‖ alternatives to / Thesis (M.Sc.Eng.)-University of KwaZulu-Natal, Durban, 2009.

This thesis has focussed on three main projects, all concerning electrophilic fluorination and fluorocyclization methodology. To begin with we considered the development of a novel fluoro-carbocyclization reaction, which combined the use of substrates of relatively low reactivity and rarely used carbon nucleophiles. Two major and common problems with electrophilic fluorination are the choice of a suitable reaction solvent and an appropriate fluorine source. These challenges were encountered and overcome to furnish a large library of cyclized products in excellent yields starting from indene and dihydronaphthalene class substrates. Our attempts to extend this methodology to an asymmetric variant using literature protocol for asymmetric fluorination were unsuccessful due to insufficient reactivity, which prompted us to investigate a new class of chiral reagents. Using the structural core of the widely used achiral reagent Selectfluor™, we prepared a variety of novel reagents which displayed greater fluorinating power than what is currently available in the literature. Finally, by combining the methodology for fluoro-carbocyclization with our selection of chiral reagents we were able to successfully achieve an unprecedented metal-free asymmetric fluoro-carbocyclization.

Fluorine atom plays a very important role in pharmaceuticals, agricultural chemicals, and medical imaging and it has become one of the most popular area in organic chemistry. For example, in modern medicinal chemistry introducing fluorine atom could potentially improve absorption, metabolism and potency of drug candidates. As a result, methods that allow the selective and efficient formation of the carbon-fluorine bond are highly desirable. An evolving approach is the utilization of transition-metals to catalyze the nucleophilic substitution of fluoride ion. This thesis described several novel and efficient methods to generate allylic and benzylic C-F bonds using rhodium/iridium catalyst.

Palladium is one of the most common and versatile transition metals used in modern organometallic chemistry. The chemistry of palladium in its 0, +II, and +IV oxidation states is well-known; by comparison, the chemistry of palladium in its +III oxidation state is in its infancy. The work in this thesis involves the study of previously unknown Pd(III) complexes, including applications in materials chemistry and catalysis. / Chemistry and Chemical Biology

Els compostos organoborats són intermedis de reacció molt valuosos en síntesi orgànica, degut a que l'enllaç carboni-bor pot ser derivatitzat de múltiples maneres. La diboració catalitzada d'alquins i alquens ha estat ampliament estudiada en els darrers quinze anys, essent la diboració catalitzada d'alquins un procés en el que s'han obtingut elevats rendiments i activitats. No obstant això, en la diboració catalitzada d'alquens la presència de la reacció secundaria de b-eliminació de H sempre s'ha presentat com un seriós inconvenient, impedint un bon compromís entre activitat catalítica i quimioselectivitat. En el primer capítol de la present tesi es recull l'evolució a través de la bibliografia de les reaccions de diboració d'alquens i alquins, els diferents metalls i lligands utilitzats en la reacció catalítica de diboració i els estudis mecanístics que s'han realitzat fins a data d'avui. Tanmateix, s'han posat de manifest les diferents derivatitzacions que s'han dut a terme a partir d'intermitjos organoborats. També es descriu breument la tècnica de les microones. Com a punt final del capítol, s'introdueixen els objectius de la tesi, incloent-hi el desenvolupament de nous sistemes catalítics que millorin l'activitat, quimioselectivitat i enantioselectivitat dels catalitzadors reportats prèviament en la reacció de diboració catalítica, l'estudi del mecanisme de la reacció de diboració d'alquens catalitzada per rodi, i la busqueda de nous mètodes de fluorofuncionalització d'esters vinic(bisboronics). En el segon capítol es descriu l'activitat, quimioselectivitat i enantioselectivitat de diferents precursors catalítics en la diboració catalitzada d'alquens i alquins. En el primer apartat es porta a terme un estudi en profunditat de la diboració d'alquens catalitzada per compostos de Rh(I), observant-se que en aquest cas els efectes estèrics en el diborà tenen un efecte dramàtic en la quimioselectivitat de la reacció. També s'observa que el lligand que ofereix una major quimioselectivitat es el DPPM (bis(difenilfosfino)metà), mostrant una influència del bite angle del lligand, mentre que el lligand QUINAP (1-(2-difenilfosfino-1-naftil)isoquinolina) és el que ofereix una major enantioselectivitat. En els següents apartats es descriu la utilització de diferents complexos d’or, argent, coure i platí modificats amb lligands carbens, els quals augmenten la quimioselectivitat de la reacció, reduïnt la producció de subproductes de b-eliminació de H. Malgrat que s’han utilitzat diferents carbens quirals, només en un cas s’ha aconseguit induir asimetria, utilitzant un complex de Cu(I) modificat amb un lligand carbé quiral, però comprometent la quimioselectivitat. També es descriu l’aplicació de carbens de platí i coure a la diboració catalitzada d’alquins, obtenint-se bons resultats d’activitat i quimioselectivitat. La utilització d’unes noves condicions de reacció, en les que es requereix un excés de diborà (2 eq.) i l’addició d’una base (NaOAc), fa que precursors catalítics en principi inactius, com complexos d’Au(I) modificats amb lligands difosfina tipus BINAP (2,2'-bis(difenilfosfino)-1,1'-binaftil), donin bons resultats d’activitat i quimioselectivitat, encara que malauradament no indueixen asimetria. Per últim, es descriu l’aplicació de les tècniques de microones com a mitjà d’acceleració en la diboració d’alquins catalitzada per Pt(0), disminuint-se espectacularment els temps de reacció. En el tercer capítol de la tesi es porta a terme un estudi mecanístic de la reacció de diboració d’alquens catalitzada per Rh(I)-QUINAP. En primer lloc es porta a terme un estudi de RMN (Ressonància Magnètica Nuclear) per a detectar les possibles espècies metàl·liques implicades. A partir d’aquí, es realitza un estudi computacional DFT (Density Functional Theory) del mecanisme de reacció, observant-se que després de l’addició oxidant es produeix la inserció de l’alqué en un enllaç Rh-B, seguida d’un reordenament per a ocupar la posició vacant creada, finalitzant amb la eliminació reductora del producte, essent el camí més favorable aquell en el qual l’alquè queda coordinat trans al nitrogen del lligand QUINAP. L’estudi de la reacció secundària de b-eliminació de H demostra que la utilització de BINAP com a lligand l’afavoreix, en comparació amb la utilització del lligand QUINAP. En el quart capítol es descriu la flurofuncionalització d’ésters vinil (bisborònics), la qual dóna lloc a la formació de cetones a,a-difluorades a través d’un procés de fluoració electròfila. Primer de tot, es fa una petita introducció als processos de fluoració electròfila, amb especial interès en la fluoració electròfila de compostos organosilats, els quals estan força relacionats amb els compostos organoborats. La reacció es duu a terme a partir dels alquins, a través d’un procés tandem de diboració catalítica/fluoració electròfila. Només els esters vinil(bisborònics) derivats del bis(pinacolato)diborà són susceptibles d’ésser derivatitzats d’aquesta manera. Els alquins interns són més actius que els alquins terminals. També es descriu la síntesi d’a,a-difluoroimines directament a partir d’alquins mitjançant un procés tandem de diboració catalítica/fluoració electròfila/iminació, l’eficiència del qual depen de les propietats electròniques del sustrat. Per últim, en el capítol 5 es descriu la fluoració electròfila asimètrica d’a- nitroésters, la qual es porta a terme mitjançant la utilització d’auxiliars quirals derivats d’alcaloids de cincona, obtenint-se excessos enantiomèrics de fins a un 40%. / Organoboron compounds are very useful intermediates in organicsynthesis, because the carbon-boron bond can be cleaved in a variety of ways leading to the formation of useful functional groups. The catalyzed diboration ofalkenes and alkynes has been widely studied in the last 15 years, obtaining high yields and activities in the alkyne catalyzed diboration reaction. However, when alkenes are used as substrates in the catalyzed diboration reaction, the problem of b-hydride elimination could arise, preventing a good agreement between catalytic activity and chemoselectivity. In the first chapter of this thesys an overview of the precedents of the diboration reactions of alkenes and alkynes is presented, including the different metals and ligands used in this reactions and the mechanistic studies published to date. Moreover, there has been collected the different derivatizations of organoboron intermediates carried out. The microwave technique is also described briefly. Finally, the scope of this thesys is explained, including the development of new catalytic systems which improve the activity, chemoselectivity and enantioselectivity of the catalytic systems previously reported, the study of the mechanism of the rhodium catalyzed alkene diboration reaction, and the search of new routes for the fluorofunctionalization of organoboron compounds. In the second chapter, the activity, chemoselectivity and enantioselectivity of different catalytic precursors in the alkene and alkyne catalytic diboration reaction is described. In the first part, a deep study on the rhodium catalyzed alkene diboration reaction is carried out, finding in this case that the steric effects on the diborating reagent have a dramatic effect on the chemoselectivity of the reaction. It is also observed that the DPPM (bis(diphenylphosphino)methane) is the ligand which provide a better chemoselectivity, showing an important bite angle influence on the ligand, while QUINAP (1-(2-diphenilphosphino-1-naphthyl)isoquinoline) is the ligand which offers a higher enantioselectivity. In the next parts it is described the utilization of different gold, silver, copper and platinum complexes as catalyst precursors, which improve the chemoselectivity of the reaction, reducing the b-hydride elimination side reaction. Despite several chiral carbene modified complexes have been used, only in one case some enantioselectivity was induced, using a carbene modified copper complex, but reducing chemoselectivity. It is also described the application of arbene modified copper and platinum complexes as catalyst precursors in the alkyne diboration reaction, obtaining good results in activity and chemoselectivity. The utilization of new reaction conditions, in which an excess of the diborating reagent (2 eq.) and the addition of a base (NaOAc) is required, improve the activity of catalytic systems like BINAP 2,2’-bis(difenilfosfino)-1,1’-binaphthyl) modified gold complexes, whose activity was very low under the typical conditions; unfortunately, no enantioselectivity was obtained in this case. Finally, it is described the application of microwave techniques to the platinum catalyzed alkyne diboration reaction, in order to reduce the reaction times.In the third chapter, an in-depth study of the mechanism of the Rh(I)-catalyzed alkene diboration reaction is described. First of all, an NMR (Nuclear Magnetic Ressonance) study was carried out in order to identify plausible intermediates. Next, a DFT (Density Functional Theory) study of the reaction mechanism was carried out, finding that after the oxidative addition of the diborane, an insertion of the alkene into a Rh-B bond is produced, followed by an internal rearrangement in order to ocupy the vacant position created, and,finally, reductive elimination of the product is produced, being the most favourable path that in which the alkene is placed trans to the nitrogen of the QUINAP ligand. The study of the b-hydride elimination side reaction shows that the utilization of BINAP as ligand favours it, with respect to the utilization of QUINAP. In the fourth chapter, the fluorofunctionalization of cis-1,2-bis(boryl)alkenes is described, leading to the formation of a,a-difluorinated ketones through an eletrophilic fluorination process. First of all, a little introduction to the electrophilic fluorination processes is made, with special interest to the electrophilic fluorination of organosilanes, which are quite similar to the organoboron compounds. The reaction is carried out starting from alkynes, through a tandem catalytic diboration/electrophilic fluorination process process. Only the cis-1,2-bis(boryl)alkenes derived from bis(pinacolato)diboron are susceptible to the fluorination process. Internal alkynes are more reactive than terminal ones. It is also described the synthesis of a,a-difluoroimines directly from alkynes through a tandem catalytic diboration/electrophilic fluorination/imination process, the efficiency of which depends on the electronic properties of the substrate.Finally, in the fifth chapter, the asymmetric electrophilic fluorination of a-nitro esters is described. This process was carried out using cinchona derivatives chiral auxiliaries, obtaining enantiomeric excesses up to 40%.

This thesis examines the synthesis of α-fluoro-β-amino acids, and the influence of the constituent fluorine on the conformation and biological properties of β-peptide derivatives. Chapter One discusses the unique properties of the C-F bond, and applications of fluorine substitution in organic and medicinal chemistry. This is followed by a review of fluorinated analogues of α-amino acids, and how their incorporation into α-peptides has resulted in profound modifications, such as enhanced thermal and chemical stability, increased affinity for lipid bilayers, stronger self-association and improved biological activity. Experimental and theoretical data indicate two conformational effects associated with fluoroamides: the F-C-C(O)-N(H) moiety in α-fluoroamides adopts an antiperiplanar conformation, and in N-β-fluoroethylamides a gauche conformation between the vicinal C-F and C-N(CO) bonds is favoured. Chapter Two details the synthesis of a series of fluorinated β-peptides (2.13-2.24) designed to investigate the use of these stereoelectronic effects to control the conformation of β-peptide bonds. X-ray crystal structures were obtained for seven of these compounds and revealed the compounds had the expected conformations: when fluorine was positioned β to a nitrogen a gauche conformation was observed, and when fluorine was positioned α to a C=O group the structure adopted an antiperiplanar conformation. Thus, the strategic placement of fluorine can control the conformation of β-peptide bonds, and hence could be used to direct the secondary structures of β-peptides. The chapter is prefaced by an introduction to β-amino acids and the secondary structures of β-peptides. Chapter Three outlines the stereoselective synthesis of a series of α-fluorinated-β-amino acids. The synthesis of α-fluoro-β3-amino acids was achieved via direct fluorination of β3-amino acids with LDA and NFSI. The fluorination of N-Boc-protected β3-homophenylalanine, β3-homoleucine, β3-homovaline and β3-homoalanine all proceeded with good diastereomeric excesses (> 85 % de). However, the fluorination of N-Boc-protected β3-homophenylglycine occurred with a lower diastereomeric excess of 66%. Replacement of the Boc amine protecting group of β3-homophenylglycine with Cbz and Bz groups did not alter the stereoselectivity of the fluorination reaction, and substitution with an acetyl amine protecting group reduced the diastereomeric excess to 26%. The stereoselective synthesis of an α-fluoro-β2-homophenylalanine from 3-phenylpropanoic acid is also detailed. Conversion of the acid to the Evan's oxazolidinone followed by enantioselective fluorination and alkylation in high diastereomeric excess, and subsequent amination gave the α-fluorinated β2-amino acid. Chapter Four describes the enzyme assays carried out to assess the inhibitory activity of α-fluoro-β-amino acids, and the analogous non-fluorinated β-amino acids, against α-chymotrypsin. Both fluorinated and non-fluorinated β-amino acid derivatives were found to be competitive inhibitors of α-chymotrypsin, with Ki values in the low millimolar range. The fluorinated β2-homophenylalanine and β3-homophenylglycine derivatives (2.35, 3.26a, 3.43a and 3.44) were found to be more active against α-chymotrypsin than their non-fluorinated analogues (5.27, 3.24, 3.40 and 3.41), whereas the fluorinated β3-homophenylalanine methyl ester (2S,3S)-2.49 was inactive against α-chymotrypsin although the corresponding non-fluorinated derivative (S)-3.28 was a potent inhibitor. In Chapter Five a series of N-succinyl-β-amino acids-p-nitroanilides (5.8-5.13), containing both fluorinated and non-fluorinated β-amino acids, were designed and synthesised as possible substrates of α-chymotrypsin. β-Peptides are stable towards proteolytic hydrolysis, but the introduction of fluorine at the α-position in a β-amino acid was proposed to increase the activity of the adjacent amide bond, and thus make the β-peptide more susceptible to protease cleavage. However, the incorporation of fluorine had no influence on the proteolytic stability of compounds 5.8-5.13 as they were all found to be stable towards hydrolysis by α-chymotrypsin. Compounds 5.8, 5.9 and 5.13 were established as reversible competitive inhibitors of α-chymotrypsin Chapter Six is an experimental chapter and outlines the synthesis, purification and characterisation of the compounds prepared in this thesis.

As an atomic layer of sp2-hybridized carbon atoms closely packed in a honeycomb lattice, graphene has been attracting increasing attention since its discovery in 2004 due to its extraordinary physicochemical properties. Graphene oxide (GO), a non-stoichiometric graphene derivative with the carbon plane abundantly decorated with hydroxyl, epoxide and carboxylic groups, can be massively and cost-effectively produced from natural graphite following Hummers method. GO has greater aqueous solubility than pristine graphene due to its oxygen-functionalities. Various solution-based chemical methods can be applied to GO, which has stimulated a new research area called ???wet chemistry of grahene???. Among them, chemical reduction of GO provides a facile route for large-scale synthesis of graphene. With abundant oxygen-functionalities in its structure, GO can potentially act as a suitable precursor for chemical modifications of graphene through methods used in organic chemistry. Special attention should be paid to that the hydroxyl groups in GO belong to tertiary alcohols, and steric hindrance should be considered when performing chemical modifications. Diethylaminosulfur trifluoride (DAST), a fluorinating reagent, is ineffective in fluorinating GO due to the steric hindrance of tertiary hydroxyls. However, DAST is effective in reducing GO. The capability of DAST for GO reduction is close to hydrazine, but the reduction reaction can be performed at lower temperature for DAST. As a two-dimensional (2D) nanomaterial with good aqueous solubility, biocompatibility and excellent intrinsic mechanical properties, GO is particularly useful in preparing 3D hybrid hydrogel scaffolds for tissue engineering applications.