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Master of Veterinary Bioscience / Department of Diagnostic Medicine/Pathobiology / Deon Van Der Merwe / Every year thousands of domestic animals are poisoned by ethylene glycol. Exposure is normally orally, but may be dermal, and poisonings are usually accidental and not malicious. Antifreeze, overwhelmingly the source of the ethylene glycol poisoning, is responsible for over 99% of reported cases. Storage, handling and proper disposal of ethylene glycol is extremely important in limiting access to this deadly product. Ethylene glycol exposures were involved in 1737 calls made to the American Society for the Prevention of Cruelty to Animals call center between 2006 and 2011. Dogs were involved in approximately 87% of exposures and cats in 13%. There were no seasonal or breed patterns. The most common clinical signs reported were neurological and gastrointestinal for both cats and dogs. Urinary calcium oxalate crystals were reported in 28.6% of exposed cats, and 21% of dogs. Attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR) was used to detect calcium oxalate crystals in wax-mounted kidneys from twenty total cases, ten of which were suspected ethylene glycol poisoning submitted to the Kansas State Veterinary Diagnostic Laboratory, and ten samples deemed negative by a pathologist using light microscopy. Pure calcium oxalate monohydrate was used as a reference, and a unique absorption peak was detected between wavenumbers 1290 cm[superscript]-1 and 1320 cm[superscript]-1. The drying of kidney tissues resulted in increased sensitivity for calcium oxalate. Crystal detection by the ATR-FTIR was compared to light microscopy. Bi-fringence of crystals allowed microscopic detection, but the ATR-FTIR specificity for the test was 100%, and sensitivity was 80% compared to traditional microscopy for ca-oxalate crystal identification. ATR-FTIR was also used to detect un-metabolized ethylene glycol in vomitus using wavenumbers 1084 cm[superscript]−1, 1039 cm[superscript]−1, and 882 cm[superscript]−1, but ethylene glycol was not detectable. Ethylene glycol concentrations in samples were much too low to be detected as ethylene glycol on the ATR-FTIR, as the limit of detection was not distinguishable until 5000 ppm using a serial dilution. These methods presented simple, reliable, quick, sensitive, stable, and highly adaptable tests for detection, diagnosis and treatment of ethylene glycol poisoning.

Thesis (MEng)--Stellenbosch University, 2015. / AFRIKAANSE OPSOMMING: Raadpleeg die volteks vir opsomming, asseblief. / ENGLISH ABSTRACT: Please refer to full text for abstract

Cleaning validation of pharmaceutical manufacturing equipment is required by legislation. Generally, wet chemical techniques are employed using swabbing and/or rinse sampling methods. These are generally either selective and time consuming, or less selective and give results in a shorter period. The infrared reflection absorption spectroscopy (IRRAS) technique explored here attempts to deliver accurate, selective surface contamination information in real time to complement current methods and reduce down-time. The IRRAS instrument used in this research is a Fourier transform infrared (FTIR) spectrometer coupled by an IR fibre-optic cable to a grazing-angle sampling head with a fixed incidence angle of 80°. The introduced flexibility permits collection of in situ spectra from contaminated surfaces. Calibration models are developed using the multivariate, linear partial least squares (PLS) statistical method. The research focuses on sodium dodecyl sulfate (SDS), a model cleaning agent, on metal (aluminium and stainless steel) and dielectric (glass, EPDM and silicone) surfaces. The effects of surface finish are investigated for SDS on stainless steel. Calibrations for SDS and paracetamol in the presence of each other on glass surfaces are examined, as well as a common industrial cleaner (P3 cosa® PUR80) on polished stainless steel. For the calibration sets in this thesis, RMSECV values were < 0.41 µg cm⁻², corresponding to conservative surface residues detection limits of better than ~0.86 µg cm⁻². However, RMSECV values depend on the calibration loading range, and the detection limits were typically ~0.2 µg cm⁻² for loading ranges 0-2.5 µg cm⁻². These are below visual detection limits, generally taken to be 1-4 µg cm⁻², depending on the analyte and substrate. This shows that IRRAS is a viable method for the real-time detection and quantification of surface contamination by surfactants and active pharmaceutical ingredients on metals and dielectrics.

Electrospray ionization mass spectrometry (ESI-MS) is a powerful method to monitor organometallic reactions. It is fast at generating spectrum, soft to fragile organometallic compounds and sensitive to intermediates in low concentration. When coupled with the pressurized sample infusion (PSI) that helps to continuously inject reacting solution to the MS, both an inert-gas atmosphere and real-time reaction monitoring can be achieved. Also collision induced dissociation (CID) of MS can be used to probe the relative binding affinities of phosphine ligands in ruthenium complexes. PSI ESI-MS can be coupled with Fourier transform infrared spectroscopy (FTIR) to monitor the rhodium-catalyzed hydroacylation simultaneously. This technique expands the dynamic range to 5 magnitudes. The effect of mass-transfer in heterogeneous hydrogenation of charge-tagged alkyne was also studied by PSI ESI-MS. In this study cross area, stirring effect, catalyst loading and hydrogen concentration were considered and tested. Also in the study an interesting finding reveals in heterogeneity of the solution. Relative binding affinities of different phosphine ligands were attained from comparing the relative intensities of fragmentation products from MS/MS. And the phosphine ligand substitution reaction was monitored by the ESI-MS in a real-time manner. A competitive dissociative substitution mechanism was proposed and confirmed by the simulation and modeling of COPASI. / Graduate

Challenges encountered in pathogen identification and detection include the genetic heterogeneity of strains within species of some foodborne pathogens, isolation of injured cells, mixed strains or mixed species contamination of foods, and differentiation between viable and dead cells. The first objective of this research was to evaluate an isolation medium that was based on time-delayed release (5 to 6 h) of selective agents in tablet format to a modified Listeria recovery enrichment broth (mLRB) medium for enhanced and rapid recovery of injured Listeria. The second objective involved the use of Fourier transform infrared (FT-IR) spectroscopy and chemometric analysis for the differentiation of: Listeria monocytogenes epidemic clones (ECs); viable versus heat-killed populations; different mixed strains and mixed species of Listeria; and different injury treatments and repair in Listeria populations. Nitrite- or acid-injured Listeria at approximately 10 CFU/ml were recovered in mLRB medium, and cell populations enumerated at various times (12 to 48 h) of incubation at 37oC. Analysis of variance revealed that acid-injured Listeria populations in mLRBS6 (mLRB plus the selective agents at 6 h) were significantly higher (P < 0.05) than those in mLRBS0 (mLRB plus the selective agents at 0 h) at 24 h; however, the differences in populations on these two media were not significant for nitrite-injured Listeria. Cell populations of four strains of Listeria recovered in mLRBTD (mLRB plus the time-delayed release tablets of the selective agents) were significantly higher than when those strains were enriched in the U.S. Food and Drug Administration (FDA), International Organization for Standardization (ISO), and U.S. Department of Agriculture (USDA) broths at 24 h. Comparison between artificially contaminated milk and meat samples with a four-strain cocktail of Listeria resulted in cell populations that were significantly higher (P < 0.05) on mLRBTD for contaminated meat than on mLRBTD for contaminated milk at 24 h. FT-IR spectroscopy in the mid-infrared region (4000 to 600 cm-1) and chemometrics was successfully applied to discriminate L. monocytogenes strains belonging to the same EC (ECII or ECIV) (100% accurate spectral classification), intact and heat-killed populations of each EC strain (100% accurate spectral classification), and spectral wavenumbers 1650 to 1390 cm-1 were used to differentiate heat-killed from intact populations. FT-IR spectroscopy and chemometrics in the wavelength region 1800 to 900 cm-1 could successfully discriminate different mixed strains of L. monocytogenes (98.15% accurate spectral classification) and different mixed species of L. monocytogenes and L. innocua (92.06% accurate spectral classification) from individual strains; Wavelength range 1800 to 900 cm-1 was successfully used to discriminate between intact, acid-injured, and heat-injured Listeria, with repaired cells from acid and heat treatments clustering closer to intact cells (93.33% of spectra accurately classified). Delayed-addition of selective agents to broth medium improves recovery of injured Listeria by allowing repair time, could minimize contamination through manual addition of selective agents, and saves analyst time; FT-IR spectroscopy is a highly discriminatory and reproducible technique that can be used for the differentiation of strains and various physiological states of Listeria.

Os catalisadores eletroquímicos binários de PtSn/C, PdSn/C e PtPd/C foram sintetizados em diferentes proporções pelo método da redução via borohidreto, posteriormente estes foram caracterizados por microscopia eletrônica de transmissão, difração de raios X, espectroscopia no infravermelho por transformada de Fourier (PtSn/C e PdSn/C) e energia dispersiva de raios X. As atividades eletroquímicas dos diferentes materiais preparados foram avaliadas por intermédio de voltametria cíclica, cronoamperometria e curvas de polarização em célula a combustível alimentada diretamente por etileno glicol em eletrólito alcalino. As curvas de densidade de potência indicaram que os catalisadores eletroquímicos contendo Sn e Pd são mais ativos para a reação de oxidação do etileno glicol, especialmente a composição 70%:30% - relação molar entre os metais suportados em carbono - dos catalisadores PtSn/C, PdSn/C e PtPd/C todos superando as medidas de potência do Pt/C. Este resultado indica que a adição de Sn e Pd favorece a oxidação do etileno glicol em meio alcalino. O melhor desempenho observado para os catalisadores eletroquímicos PtSn/C, PdSn/C e PtPd/C (70%:30%) poderia estar associado à sua maior seletividade quanto a formação de oxalato, ou seja , a formação deste produto resulta em um maior número de elétrons, por consequência em maiores valores de corrente. / Binary electrochemical catalysts PtSn/C, PdSn/C and PtPd/C were synthesized in different proportions by the method of reduction via borohydride. These were characterized by transmission electron microscopy, X-ray diffraction, Fourier transform infrared spectroscopy (PtSn/C and PdSn/C) and energy dispersive X-ray. The electrochemical activities of the different materials prepared were evaluated by cyclic voltammetry, chronoamperometry and polarization curves for fuel cell powered directly by ethylene glycol in an alkaline electrolyte. Power density curves indicated that the electrochemical catalysts Sn-containing or Pd-containing are more active for ethylene glycol oxidation reaction, particularly the (70%:30%) composition of PtSn/C, PdSn/C and PtPd/C, all of them exceeding power measurements of Pt/C. These results indicate that the addition of Sn and Pd promotes the oxidation of ethylene glycol in an alkaline medium and this improved performance may be associated with a higher selectivity for the formation of oxalate that results in a larger number of electrons, consequently enhancing the current values.

Thesis (Master of Applied Sciences in Chemistry)--Cape Peninsula University of Technology, 2018. / Biosensors have been on the forefront to provide clinical diagnosis tools for various diseases. Proper selection of biomarkers as well as chemical electrode modification is key in the fabrication of electrochemical biosensors. Hence, electrode modified with nanomaterials devices to improve electroanalytical applications. These nanomaterials were functionalized to improve conductivity, accelerate signal transduction and amplify biorecognition events. Thus, resulting in novel sensing platforms that are highly sensitive and selective towards the target analyte. In this study, gold nanorods (Au NRs) capped with CTAB, zeolitic imidazole framework were synthesised using the seed mediated and hydrothermal method respectively. Composites of gold nanorods with cysteine, ZIF-8 or both were also synthesised. All synthesised materials were characterized using ultraviolet–visible (UV-Vis) spectroscopy, Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), X-Ray diffraction (XRD) and cyclic voltammetry (CV) techniques. The obtained results confirmed the synthesis of the nanomaterials and composites. Identification of the ideal platform for fabrication of a transducer with the best electrochemical response was determined by studying the combinations of the synthesised nanomaterials and composites. The studied parameters were surface coverage, conductivity, rate of electron transfer constant. Cysteine-Au NRs composites platforms, had exceptional properties hence its synthesis optimisation of was undertaken. The effect of CTAB, reaction time, volume and concentration ratio of Au:Cysteine, temperature and pH on the composite properties were assessed. However, this composite’s electrochemical properties decreased when bioconjugated with the antibodies. Hence, the choice of Au NRs CTAB functionalised ZIF-8 (CTABAu/ZIF-8) as the transducer for biosensor applications due to a more favourable biocompatibility. Biosensor fabrication was done by drop coating glassy carbon electrode with the CTABAu/ZIF-8 forming a transducer followed by immobilisation of the antibody (Ab) using a covalent attachment method with glutaraldehyde (GA) as a cross linker. The target analyte, epidermal growth factor (EGF) was interacted with the Ab binding sites via electrostatic forces. All the fabrication steps were optimized for biosensor components, immobilization technique (drop coating and immersion), concentration and incubation time of linker and bioreceptor, as well as the synthesis of the CTABAu-ZIF-8 composites where in situ and ex situ techniques were compared together with the effect of the concentration ratio of Au: ZIF-8. There was also an analysis of optimum pH. Optimum conditions were found to be immersion in 3 % GA and 2 μg/ml Ab, with incubation times of 8, 10 and 5 minutes for GA, Ab and EGF respectively at a pH of 6. The following electroanalytical techniques: cyclic voltammetry (CV), differential pulse voltammetry (DPV) and square wave voltammetry (SWV) were utilised for EGF detection. The DPV showed better reproducibility, higher currents and better resolution hence; it was the method of choice. The technique’s optimisation involved assessments of the effect of step potential, starting potential and pulse amplitude. The optimum response for pulse amplitude, step potential and starting potential were 60 mV, 20 mV and 0.5 V respectively. The biosensor analytical parameters were linear towards EGF in the concentration range from 2 to 100 nM with a detection limit of 0.58 nM. Reproducibility and repeatability tests were acceptable, and the biosensor had a stability over 80 % within 15 days. There was no interference observed in the presence of glucose and creatine. The EGF biosensor was successfully applied in urine and saliva analysis, obtaining 67.5 and 3.12 nM respectively. This biosensor’s positive outcome strongly suggests its potential as a diagnosis tool for early detection of kidney disease as it was able to detect EGF concentration within physiological levels of EGF in normal kidney function.