Orientador: Luís Henrique Bassoi / Banca: Roberto Lyra Villas Bôas / Banca: Hélio Grassi Filho / Banca: Davi José Silva / Banca: Antonio Odair Santos / Resumo: A grande maioria dos solos cultivados com videira no Brasil apresenta baixo teor de matéria orgânica e alguma limitação à nutrição da planta. Hipoteticamente, esses solos teriam uma pequena capacidade de suprimento de nitrogênio, sendo necessária correções com aplicação de fertilizante nitrogenado mineral ou orgânico para que as plantas tenham condições de expressar seu potencial produtivo. O N assim como outros nutrientes, pode afetar o crescimento vegetativo da videira de vinho, a produção e a composição do mosto, influenciando na qualidade do vinho. Assim, este trabalho teve como objetivo avaliar o efeito da adubação orgânica e nitrogenada na produção e no comportamento ecofisiológico da videira de vinho cv. Syrah no Vale do Submédio São Francisco. O experimento foi conduzido na Embrapa Semiárido, em Petrolina - PE, em um Argissolo Vermelho Amarelo Eutrófico Latossólico de textura média. As videiras plantadas em 31 de abril de 2009 no espaçamento de 1 x 3 m, foram conduzidas no sistema de espaldeira. A irrigação foi realizada por um sistema de gotejamento e o manejo realizado com base na evapotranspiração da cultura. Os tratamentos foram constituídos de 2 doses de AO (0 e 30 m3 ha-1) e 5 doses de N (0, 10, 20, 40 e 80 kg ha-1) aplicada via fertirrigação, dispostos em blocos casualizados com 5 repetições. Os tratamentos foram dispostos em parcelas subdivididas, sendo que o AO constituiu as parcelas e as doses de N as subparcelas. Em 3 ciclos de produção (13 de abril a 9 de agosto de 2010, 10 de novembro de 2010 a 28 de fevereiro de 2011, e 10 de maio a 9 de setembro de 2011), foram realizadas a avaliação da produção e da composição química das uvas, o monitoramento dos teores de nutrientes no solo e nas folhas, a determinação do índice de clorofila nas folhas, a determinação da... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: The majority of the soils cultivated with vine in Brazil have low organic matter content and many limitations to plant nutrition. Hypothetically, these soils have little capacity to supply nitrogen, and the application of mineral or organic nitrogen fertilizer is necessary to make the vines able to show their production potential. The nitrogen as well as other nutrients can affect the vegetative growth of the vine, wine production and wine composition, influencing the wine quality. This study aimed to evaluate the effect of organic and nitrogen fertilzation in the grape production and ecophysiological behavior of vine cv. Syrah in the Lower Middle São Francisco Valley, Brazil. The experiment was carried out at Embrapa Tropical Semi-Arid, in Petrolina, State of Pernambuco, Brazil, in a Argissolo Vermelho Amarelo Eutrófico Latossólico, medium texture. Vines were planted on April 31, 2009, at a spacing of 1 x 3 m, and were conducted in an espalier system. Water was applied by a drip irrigation system and the water management was based on crop evapotranspiration. The treatments consisted of 2 organic fertilizer rates (0 and 30 m3 ha-1) and five N rates (0, 10, 20, 40 and 80 kg ha-1) applied by fertigation. The randomized block design was used, with 5 replications. The treatments were arranged in split plots with the organic fertilizer rates composing the main plots and N rates composing the subplots. In three growing seasons (April 13 to August 9, 2010, November 10, 2010 to February 28, 2011, and May 10 to September 9, 2011) the evaluation of grape production and its chemical composition, monitoring of soil and plant nutrient levels, determination of leaf chlorophyll content, and the determination of the soil apparent electrical conductivity (ECa) were performed. The amount of nutrients added by organic fertilizer resulted in a significant accumulation... (Complete abstract click electronic access below) / Doutor

Regulated deficit irrigation (RDI) is a common and useful practice for water conservation and improving grape quality. To attain better grape characteristics and wine quality, a substantial degree of irrigation stress is intentionally allowed to occur during the first part of berry formation and can continue until later into veraison. Understanding the effects of deficit irrigation on photosynthetic rates could be helpful in determining at what degree and duration a grower should perform this irrigation practice. The focus of this study was to determine the effects of using differing degrees of RDI in a vineyard located in Paso Robles, California (central coast region) on gas exchange of the Syrah variety. The target irrigation levels were set for each season at 75, 60, 45, and 30% ETc of a fully irrigated vine (100% ET). The 60% replication was considered as the control for this study, as it is the standard target ET rate for the vineyard where this study was conducted. A gas analyzer (LICOR 6200) was used to measure the overall rate of photosynthesis during two successive growing seasons (2004 & 2005). Measurements were taken from bloom through harvest and were compared among the four different irrigation levels. Along with overall photosynthetic rate, the leaf temperature, stomatal conductance, light level, and relative humidity were also measured. The results of the two year study were statistically compared through an analysis of variance (ANOVA) and analyzed for their significance. The results of the study showed that minor differences in the mean photosynthetic rates were found to occur during brief periods of the growing season. These differences ranged from 1-4 weeks and did not occur at similar times of the growing season. However, no statistical significant differences were found to exist when compared among the four irrigation levels for the entire growing season. Observed differences in canopy sizes indicated that irrigation amounts had affected the overall growth to some degree during this two year study. Several plant physiological measurements showed a significant difference in the measured gas exchange rates between sun exposed leaves and the shade leaves within the treatment area. A significant correlation of the effect of leaf temperature on stomatal conductance was observed to exist in one of the irrigation treatments (45% ET) during this study. Other plant physiological measurements indicated that highly significant differences existed between the photosynthesis rate and leaf temperature. Photosynthetic rates were highly significantly correlated to leaf conductance, air temperature, and relative humidity. A significant difference of photosynthetic rates was identified to occur between stomatal conductance and air temperature. This study concludes that differential irrigation amounts on Syrah in the Central Coast region, specifically Paso Robles, have minimal effect on overall photosynthetic rate and does not fully support the anisohydric stomatal reaction that has recently been studied by plant physiologists working with this variety.

No description available.

No description available.

Several experiments were conducted to determine the influence of modifying the grapevine microclimate on the incidence of fruit rot and selected rot metabolites of Virginia grown White Riesling (<i>Vitis vinifera</i> L.) grapes. Due to the relatively high incidence of rot observed in these studies, an evaluation of the effects of rot on the sensory evaluation of juice and on selected aroma components was also undertaken. The effect of shoot topping to 10 or 20 nodes or the application of ethephon on the incidence of grape rot was measured for three seasons. Canopy modification by both topping and ethephon treatment increased sunlight penetration into the fruiting zone. Fruit rot incidence and the concentrations of rot-associated metabolites were significantly and mutually correlated. Fruit rots and rot metabolites were greatest with control and ethephon-treated vines and were least with vines whose shoots were topped to 10 nodes. In a separate three-year study, two to four leaves were removed from the fruiting zone of grapes grown on two training systems. Selective leaf removal generally increased sunlight penetration into the grapevine canopy. The incidence of Botrytis and sour rot as well as the concentrations of rot organism metabolites in harvested fruit were reduced by leaf removal. The effect of grape sour rot on general fruit chemistry, free volatile terpenes, potentially free volatile terpenes, selected polyols and rot metabolites was undertaken. Grape sour rot increased °Brix, glucose to fructose ratio, titratable acidity, tartaric acid, glycerol and gluconic acid. Grape sour rot reduced the concentrations of geraniol, nerol and linalool, while increasing oxidation products, aromatic alcohols and long chained alcohols. Grape juice sensory analysis appeared to be influenced by the severe fruit rot which occurred in both the control and to a lesser extent in canopy manipulated vines in both studies. The importance of fruit rot was demonstrated by both the production of odors, metabolites, and the destruction of native grape aroma constituents. Reductions in the incidence of fruit rot by selective leaf removal and shoot topping were demonstrated and were probably due to several microclimate factors that collectively increased evaporative potential and spray penetration into the fruit zone. The results illustrate that remedial canopy management practices that improve fruit zone porosity can mitigate the severe disease pressure that exists when rot-prone cultivars are grown in humid grape growing regions. The inability to reduce fruit rots further than noted in these studies may be due to the complex nature of fruit rots observed here, compared to those (principally Botrytis rot) examined in the majority of other canopy management studies. / Master of Science

Macrophoma rot is a general term for fruit rots of Vitis spp. caused by the fungus Neofusicoccum ribis (syn. Botryosphaeria ribis) or closely related or renamed taxa, including Botryosphaeria dothidea. While mainly observed as a fruit pathogen of muscadine grape, the disease has recently been observed on bunch grapes in Virginia. Isolates (N = 835) were collected from Petit Manseng fruit clusters from seven Virginia vineyards in 2018 and 2019. A subset of these isolates was sequenced using three primer sets (ITS, RPB2, and EF). The preliminary result showed a single taxonomic strain of N. ribis. A controlled inoculation study of Petit Manseng clusters verified that infection could occur anytime between bloom and 2 weeks post-veraison; however, both the mean cluster incidence and the severity of Macrophoma rot did not differ from each other at any growth stage during the season. A season-long cluster exposure experiment showed that any amount of sun exposure significantly increased Macrophoma rot severity compared to shaded clusters, and that full sun exposure was associated with greatest rot severity. This finding contravenes current management recommendations for Macrophoma rot, and it raises yet unanswered questions as to why exposed clusters are more susceptible to Macrophoma rot than are shaded clusters. An in vitro fungicide assay study using nine fungicides identified captan, thiophanate-methyl, and tetraconazole as potential candidates for management of Macrophoma rot which need to be investigated further. / Master of Science in Life Sciences / Macrophoma rot is a general term for fruit rots of grapes caused by the pathogenic fungi in the family Botryosphaeriaceae. The rot is mainly observed on Muscadine grapes, but recently more cases were found on a wine grape cultivar Petit Manseng in Virginia. Macrophoma rot symptoms begin as dark brown, circular lesions on the surface of the berry and look similar to sunburn and other fruit rots. As the disease progresses, the lesion envelopes the entire berry and black fruiting bodies develop. Severe cases may lead to crop loss. The same group of pathogens is also associated with rots on other crops including apple, pear, olive, and kiwis. Very little is known about the disease cycle and the control of Macrophoma rot, therefore, an investigation into this fungal pathogen was needed. Multiple studies with the wine grape variety Petit Manseng were conducted during the 2018-2019 growing seasons, including a survey, leaf removal trial, and an inoculation study. Results showed that a species called Neofusicoccum ribis was found in vineyards across northern and central Virginia based on the genetic identification of fungal isolates collected at seven vineyards in those areas. Macrophoma symptoms were observed to be more prevalent and severe in more exposed clusters based on a leaf removal experiment. An artificial inoculation experiment revealed that grape clusters are susceptible to Neofusicoccum ribis at any time during the season. Based on the screening of nine fungicides, three chemicals (captan, thiophanate-methyl, and tetraconazole) showed promising results as possible management tools for Macrophoma rot. The knowledge collected will lead to an increase in understanding of this fungal pathogen and to further studies to manage Macrophoma rot.

Thesis (MScAgric.)--Stellenbosch University, 2000. / ENGLISH ABSTRACT: Phomopsis cane and leaf spot disease of grapevine is an economically important disease in many of the vine-growing areas of the world. Four different Phomopsis spp. have previously been associated with this disease. The present study investigates the taxonomic significance of the different taxa found on grapevines in South Africa, as well as the endophytic growth and fungicide sensitivity of Phomopsis viticola isolates. The thesis is compiled of several different parts, which deal with specific, but related topics, and hence some duplication has been unavoidable. Understanding the epidemiology of a disease is important for the correct timing of disease control. To investigate the endophytic growth of P. viticola, asymptomatic shoots were collected at eight different growth stages. Nodes, internodes, leaf petioles, leaves, tendrils and bunch peduncles were investigated. Two Phomopsis spp., taxon 1 and 2 were identified in this study. The Phomopsis viticola-complex had a relative importance of 9% and accounted for 3% of the isolations. P. viticola (taxon 2) is mainly isolated from the nodes and internodes. Inoculations of healthy, young vine tissue confirmed taxon 2 to be a virulent pathogen, suggesting that it is a latent pathogen rather than an endophyte. In contrast, taxon 1 appeared to be a true endophyte, and did not seem to be an important pathogen on vines. The true identity of the causal organism of Phomopsis cane and leaf spot disease was investigated by collecting samples from 58 different vineyards in the grapevine growing areas of the Western Cape. P. viiicola occurred in grapevine material collected from Lutzville to Swellendam, but was not found in the Oudtshoorn and Orange River grapevine areas. Diaporthe perjuncta (taxon 1), P. vutcola (taxon 2), taxon 3 and a Phomopsis species commonly associated with shoot blight of peaches in the U.S.A., P. amygdali, were identified among the South African grapevine isolates. Examination of the Australian culture designated as taxon 4 found it to be a species of Libertella, thus excluding it from the P. viticola-complex. An Italian isolate was found to represent a species of Phomopsis not previously known from grapevines, and this was subsequently described as taxon 5. Species delimitation was based on morphological and cultural characteristics, stem inoculations and the formation of the teleomorph in vitro. The identity of each morphological taxon was confirmed by means of phylogenetic analyses of the nuclear ribosomal DNA internal transcribed spacers (ITS 1 and ITS2) and the 5' end partial sequence of the mitochondrial small subunit (mtSSU). P. amygdali, associated with peach shoot blight in the U.S.A., was isolated once only and appeared to be of lesser importance in this disease complex. Furthermore, taxa 1 (Diaporthe perjuncta) and 3 were also rarely encountered and proved to be non-pathogenic, indicating their non-functional role in Phomopsis cane and leaf spot disease. Taxon 2 (Phomopsis viticolas was common and widely distributed in diseased vineyards. This taxon was associated with the typical disease symptoms and proved to be pathogenic. Morphologically taxon 2 corresponded best with P. viticola, which was also neotypified in this study. Taxon 2 was mostly isolated from buds and nodes, indicating that these are important sites in which the fungus survives during winter. Molecular data indicated that taxon 3 and P. amygdali were not host specific to grapevine. The currently used foliar fungicides were compared to the new strobilurin fungicides. The effects of nine fungicides (azoxystrobin, flusilazole, folpet, fosetyl- Al+mancozeb, kresoxim-methyl, mancozeb, penconazole, spiroxamine and trifloxystrobin) were tested in vitro on inhibition of mycelial growth. The following EC50 (ug/ml) values were obtained: azoxystrobin (0.350), flusilazole (0.007), folpet (4.489), fosetyl-Al+mancozeb (3.925), kresoxim-methyl (1.665), mancozeb (2.891), penconazole (0.023), spiroxamine (0.321) and trifloxystrobin (0.051). Additionally, azoxystrobin, folpet, kresoxim-methyl, mancozeb, propineb and trifloxystrobin were tested for their ability to inhibit spore germination in vitro. The subsequent EC50 (ug/ml) values were obtained: azoxystrobin 0.123), folpet (0.510), kresoxim-methyl (0.0037), mancozeb (0.250), propineb (0.156) and trifloxystrobin (0.003). The results reported in part 4 showed that the strobilurin fungicides inhibited the mycelial growth and spore germination of P. viticola. However, further trials need to be conducted to verify these findings under field conditions. In the present study taxa 1, 3 and P. amygdali were infrequently isolated, suggesting that they played a less prominent role in the P. viticolacomplex. / AFRIKAANSE OPSOMMING: Streepvleksiekte van wingerd is 'n ekonomies belangrike siekte wat in die meeste wingerdproduserende gebiede van die wêreld voorkom. Vier Phomopsis spesies is in die verlede met dié siekte geassosieer. Hierdie studie ondersoek die taksonomiese belangrikheid van die verskillende taksa wat op wingerd in Suid Afrika gevind word, asook die endofietiese groei en fungisiedsensitiwiteit van die Phomopsis vitico/a isolate. Hierdie tesis bestaan uit verskeie dele met spesifieke, maar verwante onderwerpe wat tot onafwendbare duplisering lei. Dit is belangrik om die epidemiologie van 'n siekte te verstaan sodat korrekte en tydsberekende siektebeheer toegepas kan word. Die endofietiese groei van P. vitico/a is ondersoek deur simptoomlose lote by agt verskillende groei stadiums te versamel. Nodusse, internodusse, blaarstele, blare, rankies en trosstele is ondersoek. Twee Phomopsis spp., takson 1 en 2 is geïdentifiseer. Die Phomopsis vitico/a-kompleks het 3% van die isolasies uitgemaak en 'n relatiewe belangrikheid van 9% getoon. P. vitico/a (takson 2) is meestal uit die nodus en internodus geïsoleer. lnokulasies van gesonde, jong wingerdweefsel het bevestig dat takson 2 'n virulente patogeen is en dat die takson eerder 'n latente patogeen as 'n endofiet is. In teenstelling hiermee is takson 1 'n ware endofiet en 'n onbelangrike patogeen op wingerd. Die ware identiteit van die veroorsakende organisme van streepvlek is ondersoek deur plantmateriaal vanaf 58 verskillende wingerde in die wingerproduserende gebiede van die Wes-Kaap te versamel. P. vitico/a is in wingerdmateriaal vanaf Lutzville tot Swellendam aangetref, maar nie in die Oudtshoorn en Oranjerivier wingerd produserende gebiede nie. Diaporthe perjuncta (takson 1), P. vitico/a (takson 2), takson 3 en P. amygdali is in die Suid Afrikaanse wingerdisolate geïdentifiseer. P. amygdali word met lootverskroeiing van perske bome in die V.S.A. geassosieer. Die Australiese isolaat wat benoem is as takson 4, is met die huidige ondersoek gevind om 'n spesie van Libertella te wees. Takson 4 is daarvolgens uit die P. vitico/a-kompleks gelaat. 'n Italiaanse isolaat het 'n nuwe spesie van Phomopsis op wingerd verteenwoordig en is vervolgens as takson 5 beskryf. Spesie-onderskeiding is op morfologiese en kulturele eienskappe, staminokulasies en die vorming van die teleomorf in vitro gebaseer. Die identiteit vanelke morfologiese takson is met behulp van filogenetiese analises van die nukleêre ribosomale DNS intern transkriberende spasieerders (ITS 1 en ITS2) en die 5' punt gedeeltelike nukleotied volgorde van die mitochondriale klein subeenheid (mtSSU) bevestig. P. amygdali is slegs een keer geïsoleer en blyk van minder belang in die siektekompleks te wees. Takson 1 (Diaporthe perjuneta) en takson 3 het ook min voorgekom en is nie-patogenies, wat hul nie-funksionele rol in streepvleksiekte aandui. Takson 2 (P. viticola) is algemeen geïsoleer en kom wyd verspreid voor. Hierdie takson is geassosieer met die tipiese siektesimptome en is ook patogenies. Morfologies stem takson 2 met P. viiicola ooreen en is ook geneotipifiseer in hierdie studie. Takson 2 is meestal vanaf die ogies en nodusse geïsoleer, wat daarop dui dat hierdie belangrike setels is waar die swam tydens die winter oorleef. Die molekulêre data toon aan dat takson 3 en P. amygdali nie gasheerspesifiek tot wingerd is nie. Die swamdoders wat tans teen streepvlek gebruik word, is met die nuwe strobilurin swamdoders vergelyk. Die effek van nege swamdoders (azoksistrobin, flusilasool, folpet, fosetyl-Al + mancozeb, kresoxirn-metiel, mankozeb, penconasool, spiroksamien en trifloksistrobin) is in vitro op die inhibisie van miseliumgroei getoets. Die volgende EKso-waardes (g/ml) is verkry: azoxystrobin (0.350), flusilasool (0.007), folpet (4.489), fosetiel-Al + mankozeb (3.925), kresoxirn-metiel (l.665), mankozeb (2.891), penkonasool (0.023), spiroksamien (0.321) en trifloxystrobin (0.051). Azoxystrobin, folpet, kresoxim-rnetiel, mankozeb, propineb en trifloksistrobin is ook in vitro getoets vir hul inhibisie op spoorontkieming. Die volgende EKso-waardes is verkry: azoxystrobin (0.123), folpet (0.510), kresoxim-metiel (0.0037), mankozeb (0.250), propineb (0.156) en trifloxystrobin (0.003). Die resultate vervat in deel 4 toon dat die strobilurin swamdoders die miseliumgroei en spoorontkieming van P. viticola inhibeer. Toetsing in die veld word egter benodig om die effektiwiteit van die middels te bevestig. In hierdie studie is taksa I, 3 en P. amygdali selde geïsoleer, wat aangedui het dat hierdie taksa 'n minder belangrike rol in die P. viticola-kompleks speel.

Thesis (MSc (Plant Pathology))--University of Stellenbosch, 2010. / ENGLISH ABSTRACT: Esca is a disease affecting grapevines and is potentially devastating as there are economic losses due to a decrease in yield, wine quality and berry quality. Vineyards also need to be replaced earlier and therefore esca has a great impact on the wine, table grape and raisin industries. The disease is known to affect vineyards worldwide and has been studied extensively in Europe, but not in South Africa. Esca diseased grapevines were observed for the first time prior to 1981 in South African vineyards. The disease is primarily caused by Phaeoacremonium aleophilum, Phaeomoniella chlamydospora (both causing brown and black wood streaking) and white rot basidiomycete species such as Fomitiporia mediterranea which cause wood rot in the trunks and arms of generally older grapevines. Species of the Botryosphaeriaceae and Phomopsis (mainly Phomopsis viticola) and Eutypa lata have also been isolated from esca diseased vines, but their association with esca is unclear. Some of the symptoms associated with the disease on most grapevine cultivars include ‘tiger-stripe’ foliar symptoms, apoplexy and berry symptoms such as shriveling, discoloration and ‘black measles’. These external symptoms as well as internal symptoms are thought to be a result of toxin and enzyme production by the fungi involved. Symptom expression is erratic and varies from year to year making investigations into the causal fungi and the toxins and enzymes secreted in planta difficult. Vines with internal or external symptoms of esca were sampled in this study from table and wine grape cultivars in 37 towns in the Western Cape, Northern Cape and Limpopo provinces. The majority of sampled vines were over ten years of age, but vines as young as two to three years were also found to be infected. The external symptoms included dieback, tiger striped leaves, berry symptoms (shriveling, insufficient colouring and black spots) and apoplexy. These symptoms resembled those found on grapevines in Europe, Australia and the USA. The internal symptoms found were also similar to European symptoms and included white rot, black and brown wood streaking, brown necrosis within white rot, sectorial brown necrosis and central brown/ red/ black margin. The fungi mostly isolated from the white rot were the basidiomycetes. Black and brown wood streaking was primarily caused by Phaeomoniella chlamydospora. Brown necrosis within the white rot was caused by Phaeomoniella chlamydospora and less frequently by Phaeoacremonium spp., Eutypa lata, Botryosphaeriaceae and Pleurostomophora richardsiae. The sectorial brown necrosis and the central/ brown/ red/ black margin were dominated by Phaeomoniella chlamydospora. The fruiting bodies of the basidiomycetes were found on only a few grapevines. The fungal species associated with the internal wood symptoms were characterized on cultural growth patterns, morphology as well as phylogenetic inference. The gene areas sequenced included the internal transcribed spacers and the 5.8S rRNA gene for the basidiomycetes and Phomopsis isolates, the partial b-tubulin gene for Phaeoacremonium isolates and the partial translation elongation-1a gene for the Botryosphaeriaceae isolates. The basidiomycete isolates fell into ten taxa within the Hymenochaetales of which two could be linked to known genera, namely Fomitiporia and Phellinus. The ten basidiomycete taxa do not correspond to any published sequences. Eutypa lata, Diaporthe ambigua, Diplodia seriata, Neofusicoccum australe, Neofusicoccum parvum, Phomopsis viticola, Phomopsis sp. 1, Phaeomoniella chlamydospora and six species of Phaeoacremonium including P. aleophilum, P. alvesii, P. parasiticum, P. iranianum, P. mortoniae and P. sicilianum were also isolated of which the latter three are reported for the first time in South Africa. To understand the role of the basidiomycetes in the complex, toxin and enzyme analyses was determined for these fungi. Selected basidiomycete isolates were grown up in liquid broth and extractions performed to test for the presence of 4-hydroxy-benzaldehyde. All of the basidiomycete isolates were able to produce this toxin which is known to be phytotoxic. The basidiomycetes were then tested for the presence of certain wood degrading enzymes. All of the taxa were able to produce manganese peroxidase. Laccase was produced by all taxa, except Taxon 8. Lignin peroxidase was produced by Taxa 1, 2, 7, Fomitiporia sp. and the Phellinus sp. All the basidiomycete isolates were able to produce cellulose and none were able to produce xylanase. These enzyme tests showed that the basidiomycetes produce a wide variety of enzymes which are able to degrade cellulase and lignin which are both structural components of wood. Given the wide distribution of esca in the grape growing regions investigated in South Africa and the diverse amount of species found, this disease must surely be seen as a limiting factor to the productive lifespan of vineyards and quality of produce. Preventative measures such as sanitation and pruning wound protection contribute to the management of the disease, but many questions still remain about the synergy of the causal fungi, epidemiology and management of esca. / AFRIKAANSE OPSOMMING: Esca is ‘n wingerd siekte wat potensieel skade kan aanrig as gevolg van ekonomiese verliese weens verlaagde opbrengs, wyn kwaliteit en vrug kwaliteit. Wingerde moet ook vroeër vervang word en daarom het esca ’n groot impak op die wyn, tafeldryf en rosyne industrieë. Esca word wêreldwyd gevind op wingerd en is al intensief nagevors in Europa, maar nog nie in Suid-Afrika. Esca is vir die eerste keer in die 1980’s in Suid-Afrikaanse wingerde gerapporteer. Die primêre veroorsaakende organismes van esca is Phaeoacremonium aleophilum, Phaeomoniella chlamydospora wat bruin en swart vaatweefsel verkleuring veroorsaak en basidiomycete spesies soos Fomitiporia mediterranea wat wit verotting veroorsaak in die stam en arms van ouer wingerd. Spesies van die Botryosphaeriaceae en Phomopsis (hoofsaaklik Phomopsis viticola) en Eutypa lata is ook al vanaf esca simptome geïsoleer, maar hul assosiasie met die siekte is nie duidelik nie. Algemene simptome wat voorkom op die meeste wingerd kultivars met esca sluit in ‘tiger-stripe’ blaar simptome, apopleksie en vrug simptome soos verdroging, verkleuring en spikkels (black measles). Interne en eksterne simptome kan wees as gevolg van toksiene en ensiem produksie van die swamme wat betrokke is by esca. Eksterne simptoom uitdrukking is wisselvallig en varieer van jaar tot jaar. Dit bemoelik die bestudering van die swamme en die toksiene en ensieme wat afgeskei word in planta. Wingerd monsters met eksterne en interne simptome is versamel van tafel en wyndruif kultivars in 37 dorpe in die Wes-Kaap, Noord-Kaap en Limpopo provinsies. Die meerderheid monsters was ouer as tien jaar maar wingerde wat twee tot drie jaar oud was, was ook gevind. Die eksterne simptome wat op hierdie kultivars gevind is het terugsterwing, ‘tiger striped’ blare, vrug simptome (verkrimping en onvoldoende verkleuring) en apopleksie ingesluit. Hierdie simptome stem ooreen met soortgelyke simptome gevind op wingerd in Europa, Australië en die VSA. Interne simptome was ooreenstemmend met simptome wat gevind word in Europa. Die interne simptome het wit verotting, bruin en swart streepvorming, bruin nekrose met wit verotting, sektoriale bruin nekrose en sentrale bruin/ rooi/ swart kante ingesluit. Basidiomycete swamme is meestal uit die wit verotting gedeeltes geïsoleer. Swart en bruin hout streepvorming was meestal deur Phaeomoniella chlamydospora veroorsaak. Bruin nekrose binne die wit verotting was meestal deur Phaeomoniella chlamydospora veroorsaak en in ‘n mindere mate deur Phaeoacremonium spp., Eutypa lata, Botryosphaeriaceae en Pleurostomophora richardsiae. Phaeomoniella chlamydospora was die hoof veroorsakende organisme van sektoriale bruin nekrose en die sentrale bruin/ rooi/ swart kante. Vrugliggame van die basiodiomycete is op enkele wingerde gevind. Swam soorte wat geassosieer word met die interne hout simptome was verder gekarakteriseer op kultuur groei, morfologiese eienskappe, en filogenetiese analise. Die geen areas waarvan die basis paar volgorde bepaal was sluit in die interne getranskribeerde spasies en die 5.8S rRNA geen vir die basidiomycete en Phomopsis isolate, die gedeeltelike btubulien geen vir Phaeoacremonium isolate en die gedeeltelike translasie velenging-1a geen vir die Botryosphaericeae isolate. Die basidiomycete isolate was versprei oor tien taksons binne die Hymenochaetales waarvan twee genusse gekoppel kon word aan die genera Fomitiporia en Phellinus. Die tien basidiomycete taksons kom nie ooreen met enige gepubliseerde DNS volgordes. Eutypa lata, Phomopsis viticola, Phomopsis sp. 1, Diaporthe ambigua, Diplodia seriata, Neofusicoccum parvum, Neofusicoccum australe, Phaeomoniella chlamydospora en ses spesies van Phaeoacremonium insluitend P. aleophilum, P. alvesii, P. parasiticum, P. iranianum, P. mortoniae en P. sicilianum is ook geïsoleer. Hierdie is die eerste keer dat P. iranianum, P. mortoniae en P. sicilianum in Suid-Afrika gerapporteer word. Om die rol wat die basidiomycete in die siekte-kompleks speel beter te verstaan is toksien en ensiem analises uitgevoer. Geselekteerde basidiomycete isolate is gekweek in vloeibare groei medium en ekstraksies uitgevoer om te toets vir die teenwoordigheid van 4- hydroxy-benzaldehyde. Al die basidiomycete isolate kon 4-hydroxy-benzaldehyde, wat bekend is om fitotoksies te wees, produseer. Die basidiomycete isolate was verder getoets vir die produksie van spesifieke hout afbrekende ensieme. Al die basidiomycete taksons kon mangaan-peroksidase produseer. Lakkase was geproduseer deur al die taksons, uitsluitend Takson 8. Lignien-peroksidase was geproduseer deur Taksons 1, 2, 7, Fomitiporia sp. en die Phellinus sp. Al die basidiomycete isolate kon sellulose produseer, maar geen kon xilanase produseer. Die ensiem analises het gewys dat die basidiomycete wat moontlik betrokke is by esca ‘n wye reeks van ensieme kan produseer wat sellulose en lignien kan degradeer. Sellulose en lignien is beide strukturele komponente van hout. Weens die wye verspeiding van esca geaffekteerde wingerde in Suid Afrika en die wye reeks van spesies wat betrokke is by die siekte kompleks moet esca sekerlik gesien word as een van die beperkende faktore op die produktiewe leeftyd van wingerde en die kwaliteit van druiwe wat geproduseer word. Sanitasie en snoeiwond beskerming is voorkomende maatreëls wat ingestel kan word om die effek en verspreiding van esca te beperk maar daar is nog baie vrae wat antwoorde benodig oor die sinergie van die veroorsakende swamme, epidemiologie en bestuur van esca.

Thesis (PhD(Agric))--Stellenbosch University, 2012 / ENGLISH ABSTRACT: Field spectroscopy was used to study leaf composition and selected factors (including canopy growth manipulation and water status changes) that may impact on it in a Vitis vinifera cv. Shiraz vineyard, showing considerable variability in vigour. Temporal and spatial variability in leaf composition were incorporated into measurements by analysing leaves in different shoot positions and at different developmental stages during three different growing seasons. Irrigation and canopy manipulation treatments were also imposed in order to provide new insights into assessing the grapevine leaf and possibly also the canopy growth and ageing dynamics as well as pigment content, as a basis of executing a generally non-destructive measurement approach. Despite large climatic differences between the seasons, canopy size seemed of crucial importance in determining grapevine water relations in the grapevines from the different canopy manipulation treatments. Drastic compensation effects in terms of secondary shoot growth also followed the canopy reduction treatment. Despite this, canopy microclimate was apparently improved, considering the results from light measurements as well as the ripening dynamics in the reduced canopies. Reduced canopies also seemed to display a different canopy composition, in favour of secondary growth. This could have impacted positively on water use efficiency as well as ripening, due to higher photosynthetic efficiency of these leaves during the ripening stages. The reduced canopy treatments offered the possibility of attaining technological ripeness at an earlier stage and at comparatively lower potential alcohol levels. This study illustrated the relevance of considering the vegetative development of the grapevine, along with leaf ageing in the canopy, when conducting calibrated non-destructive measurements of leaf pigments, structure and water content. The relevance of using multivariate techniques in leaf spectroscopy was shown. This can be applied and simplified to aid in non-destructive leaf pigment, structure and water content estimation in future studies. Even with the general variation encountered in this vineyard, predictions of the major pigments in grapevine leaves were within acceptable error margins. Further work is required to improve the modelling of xanthophylls, which may require non-linear multivariate techniques. Logistical shoot growth modelling was used in leaf age estimation and classification, which made it possible to simplify statistical analysis of the leaf parameters mentioned. Practical application of the modelled and predicted parameters was shown for a specific period in season two by comparing the reaction of different treatments to developing water deficits. The results indicated that several parameters, with special mention of the carotenoid:chlorophyll ratio and chlorophyll a:b ratio, can be monitored on young and old leaves in the canopy in order to monitor developing water deficit stress. The modelled parameters, however, did not seem to be sensitive enough to allow specific prediction of predawn leaf water potential values. Specific leaf mass, equivalent water thickness, total specific leaf mass as well as leaf chronological age were successfully predicted from leaf spectral absorbance data, and this may be useful in future work on quantifying leaf adaptation to the micro-environment within the canopy. / AFRIKAANSE OPSOMMING: Veldspektroskopie is gebruik om blaarsamestelling en spesifieke faktore (insluitend lowergroei manipulasie en waterstatus veranderinge) wat ‘n impak kan hê in ‘n Vitis vinifera cv. Shiraz wingerd, met beduidende variasie in groeikrag, te ondersoek. Ruimtelike, asook tydsgebonde, variasie in blaarsamestelling is geïnkorporeer in die metings deur blare van verskillende lootposisies en vir verskillende ontwikkelingstadia gedurende drie verskillende groeiseisoene te meet. Besproeiings- en lowermanipulasie behandelings is ook uitgevoer om die dinamiek van blaar- en lowergroei, veroudering, asook pigmentinhoud te bestudeer binne die konteks van die uitvoering van ‘n nie-destruktiewe meetstrategie. Ondanks groot klimaatsverskille tussen die seisoene, blyk lowergrootteverskille belangrik te wees in die bepaling van wingerdstok-waterverhoudings in die verskillende lowermanipulasie behandelings. Drastiese kompensasiereaksies ten opsigte van sylootgroei is waargeneem in reaksie op die gereduseerde lowerbehandeling. Indien die resultate van ligmetings en druifrypwording in die gereduseerde lowerbehandeling in ag geneem word, is lowermikroklimaat egter steeds verbeter. Hierdie behandeling het oënskynlik ook veranderde lowersamestelling gehad, tot voordeel van sylootgroei. Dit kon moontlik ‘n positiewe invloed gehad het op waterverbruikseffektiwiteit asook druifrypwording, as gevolg van moontlike hoër fotosintetiese effektiwiteit van die blare gedurende die rypwordingstadia. Die gereduseerde lowerbehandeling het die moontlikheid gebied om tegnologiese rypheid by ‘n vroeër datum te bereik, met moontlike laer alkoholvlakke in die wyn. Hierdie studie het die belangrikheid beklemtoon om die vegetatiewe ontwikkeling van die wingerdstok in ag te neem wanneer gekalibreerde nie-destruktiewe metings van blaarpigmente, blaarstruktuur asook waterinhoud onderneem word. Die belang van multi-variant meettegnieke in blaarspektroskopie is aangetoon. Dit kan verder vereenvoudig word ter ondersteuning van niedestruktiewe meting van blaarpigment, -struktuur en -waterinhoudsbepaling in toekomstige studies. Selfs met die variasie wat in die wingerd voorgekom het, was die voorspellings van die vlakke van die belangrikste pigmente wat in wingerdblare aangetref word binne aanvaanbare foutgrense. Opvolgwerk is nodig om die modellering van xanthofil te verbeter, aangesien dit moontlik nielineêre multi-variant analise mag benodig. Logistiese groeimodellering is gebruik om blaarouderdom te bepaal en te klassifiseer, wat dit moontlik gemaak het om statistiese analise te vereenvoudig vir die genoemde blaarparameters. Die praktiese toepassing van die gemodelleerde en voorspelde parameters is aangetoon vir ‘n spesifieke gedeelte in seisoen twee, deur die reaksie van verskillende behandelings op toenemende watertekorte te bestudeer. Resultate het aangetoon dat verskeie parameters, met spesifieke klem op die karotenoïed:chlorofil verhouding, asook die chlorofil a:b verhouding, gemoniteer kan word op jong en ouer blare in die lower ten einde ontwikkelende waterstrestoestande te identifiseer. Die gemodelleerde parameters was egter klaarblyklik nie sensitief genoeg vir akkurate voorspelling van voorsonsopkoms-waterpotensiaalvlakke nie. Spesifieke blaarmassa, ekwivalente waterdikte, totale spesifieke blaarmassa, sowel as blaarouderdom kon suksesvol voorspel word deur gebruik te maak van absorpsieblaarspektroskopie, wat nuttig kan wees in toekomstige studies wat handel oor die kwantifisering van blaaraanpassing by die mikro-omgewing binne ‘n wingerdlower.

Thesis (MscAgric (Viticulture and Oenology))--University of Stellenbosch, 2007. / A common phenomenon in most South African vineyards, especially in the Western Cape region, is that of within vineyard variation. This variation phenomenon is caused by an array of controllable and non-controllable factors that interact with each other to affect vine vigour. Controllable factors can be managed by the grape grower, while the non-controllable factors have to be managed in the planning process in order not to negatively affect productivity or product quality. The main goal of any grape grower is to optimise vine performance in an attempt to achieve the best possible yield while at the same time allowing vines to optimally ripen grapes towards optimal wine quality. A grape grower has to use every possible means and technique available to him in order to manage his vineyards in such a manner as to achieve this goal. In the past, it was difficult to visualize the extent and distribution of vigour variation in vineyards, but with modern technological improvements in the field of remote sensing, grape growers are able to identify and specify different vigour levels within a vineyard. When remote sensing is applied in a vineyard, the grape grower can identify certain areas that may need more specific attention than others. Consequently, managerial decisions based on detailed information can be made in an attempt to improve the general condition and performance of a vine. Not only can the acquired information be used to plan managerial actions throughout the season, but it can also be used to plan and devise harvest strategies. Some areas in a vineyard may be at a certain point in the ripening process and need to be harvested, while grapes from other areas still need to develop the wanted flavours. One managerial action applied at véraison by some grape growers, is that of crop thinning. Different vigour areas can now be subjected to various crop thinning actions in an attempt to determine the best crop load for a vigour level. With this in mind, two studies were launched to firstly investigate the interaction between vine vigour and harvest dates; and secondly to investigate the interaction between vine vigour and crop load and how their combined interaction might influence a vine’s characteristics, grape composition and wine quality. Vigour variation was firstly identified through multispectral aerial imagery, and then visually verified by visits to the experimental vineyards. The multispectral aerial image was then “orthorectified” in order to produce a classified multispectral image. The image was classified through different colour codes that were assigned to the different vigour levels to clearly distinguish between them. A series of vegetative and reproductive measurements were conducted to try and establish if any correlations could be obtained of the interaction between vine vigour, different harvest dates and crop loads. In order to verify differences in vine vigour, underlying causes were also determined through soil analyses of which chemical analysis, bulk density, porosity, as well as root penetration and distribution were determined. Vegetative measurements that were conducted for both studies indicated good correlations between the different vigour levels and the image classifications. The results also identified the effect that topping (mechanical or manual) had on the main and lateral leaf areas. Reproductive measurements throughout the season, in the form of berry sampling, showed changes in berry composition and accentuated the effects of the different treatments, which could also be confirmed through sensorial analysis of the wines. The results also emphasized the need to not only make use of one of two chemical parameters to identify grape ripeness, but to incorporate a number of parameters, such as sugar, pH and acid levels. From the varying grape chemical characteristics, a wine style can be identified that might carry the approval of the winemaker for the production of a specific type of wine. Soil studies of both vineyards also gave important evidence for the causes of vigour variation. The data collected will hopefully provide grape growers with information that will enable them to make educated decisions concerning grape production and how vigour, in conjunction with different harvest dates and crop loads, will enable them to produce fruit of good quality and, so doing, improve their financial position.