Made available in DSpace on 2014-06-11T19:26:40Z (GMT). No. of bitstreams: 0 Previous issue date: 2010-02-09Bitstream added on 2014-06-13T19:13:48Z : No. of bitstreams: 1 silva_es_me_botfca.pdf: 2204058 bytes, checksum: 3b9b852e779ccf23c221c712179cfa66 (MD5) / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) / O controle químico tem sido utilizado freqüentemente com baixa eficiência para o fungo Didymella bryoniae, causador da doença crestamento gomoso ou cancro da haste em meloeiro. Porém, alternativas de controle como uso da enxertia e manipulação da nutrição devem ser estudadas. Avaliou-se porta-enxertos e concentrações de potássio na resistência de meloeiro rendilhado a Didymella bryoniae em ambiente protegido. No primeiro experimento, quatro porta-enxertos (melão „Dinero‟, melancia „Ojakkyo‟, abóbora „Strong Tosa‟ e cabaça „Calabash TI-191‟) foram inoculados com discos de micélio (7 mm de diâmetro) de quatro isolados de Didymella bryoniae (Dbr 34, Dbr 36, Dbr 37 e Dbr 39) em caule previamente ferido. Baseado no tamanho da lesão, o porta-enxerto „Dinero‟ foi susceptível, „Strong Tosa‟ moderadamente resistente, „Ojakkyo‟ e „Calabash TI-191‟ resistentes e o isolado Dbr 37 se mostrou mais agressivo dentre os isolados. No segundo experimento, o híbrido de meloeiro „Bônus II‟ foi enxertado nos porta-enxertos „Dinero‟ e „Strong Tosa‟, inoculadas com o isolado Dbr 37 do fungo e submetidas a diferentes concentrações de potássio (0; 62,5; 125; 187,5; 250 mg L-1), tanto plantas enxertadas como pé-franco. As plantas do híbrido „Bônus II‟ enxertadas foram resistentes ao fungo e as pé-franco susceptíveis. As concentrações de potássio não influenciaram no tamanho da lesão e na sobrevivência das plantas, porém influenciaram na condutância estomática e transpiração das plantas. / Chemical control of the fungus Didymella bryoniae, causal agent of gummy stem blight of melon, is frequently inefficient. Alternative methods as grafting on resistant rootstocks and nutrition handling must be studied. Different rootstocks and potassium concentrations were tested to control the disease on net melon grown under plastic house conditions. In a first experiment four rootstocks (melon „Dinero‟, watermelon „Ojakkyo‟, squash „Strong Tosa‟ and calabash „TI-191‟) were tested for resistance inoculated by disks mycelium (7 mm diameter) with four isolates ( Dbr 34, Dbr 36, Dbr 37 and Dbr 39) of D. bryoniae in stem previously injured. Based on lesion size „Dinero‟ proved to be susceptible to the fungus, „Strong Tosa‟ moderately resistant and „Ojakkyo‟ and „TI-191‟ resistant and the isolated Dbr 37 proved more aggressive among isolates. In a second experiment hybrid net melon „Bonus II‟ was grafted on rootstocks „Dinero‟ and „Strong Tosa‟, inoculated with isolate Dbr 37 of the fungus and submitted to different potassium concentration (0; 62,5; 125; 187,5; 250 mg L-1), inoculated both grafted plants as non grafted. Grafted plants of „Bonus II‟ were resistant to the fungus and the non grafted ones susceptible. Potassium concentrations did not influenced size of the lesion on the stem and also in the plants survival, however influence on stomatal conductance and transpiration plants.

Il est actuellement estimé qu’environ 13% du vignoble français est improductif suite aux pathologies affectant le bois des ceps, la principale d’entre elles étant l’esca. Parmi les moyens de lutte mis en œuvre, le biocontrôle, via l’utilisation d’un oomycète, Pythium oligandrum, est actuellement développé pour protéger les plants de vigne contre un agent pathogène pionnier de l’esca, Phaeomoniella chlamydospora. La sélection de souches de P. oligandrum, isolées du vignoble, et produisant in vitro des quantités importantes d’une protéine élicitrice, l’oligandrine, des systèmes de défense des végétaux a d’abord été réalisée. Trois essais en serre ont montré qu’une réduction significative (40 à 50%) des nécroses dues P. chlamydospora était observée après application d’inocula de l’oomycète sur les racines des plants de vigne pied-francs Au niveau de la tige, le niveau d’expression de 22 gènes impliqués dans les mécanismes de défenses de Vitis vinifera a été mesuré par PCR quantitative et des réponses spécifiques du végétal ont été observées selon les traitements. Six gènes (protéines PR, voie des phenylpropanoïdes, oxylipines et le système d’oxydo-réduction) ont été fortement induits lorsque les plants ont été pré-inoculés par P. oligandrum puis infectés par P. chlamydospora. Afin de mettre en évidence les mécanismes spécifiques mis en place lors de cette interaction tripartite, l'analyse de la réponse transcriptomique globale de la vigne (par microarray et RNAseq), au niveau de la tige, a été réalisée chez ces plants qui manifestent une résistance induite systémique (ISR). Plusieurs gènes impliqués dans la synthèse de l’éthylène et des jasmonates sont fortement induits, chez les plants pré-traités par l’oomycète puis infectés par l’agent pathogène. Plusieurs facteurs de transcription régulant ces voies de signalisation sont également fortement induits. Suite à l’analyse des populations de messagers (mRNA) de P. chlamydospora, il a été observé que les niveaux d’expression de gènes impliqués dans la synthèse des métabolites secondaires, des facteurs de transcription impliquées dans la régulation de différentes voies chez les champignons et certaines Carbohydrates Actives enZymes étaient modulés en présence de P. oligandrum au niveau racinaire. Ces résultats montrent que la colonisation du végétal par l’oomycète, même à distance de P. chlamydospora, induit un stress indirect important chez celui-ci. Afin d’optimiser l’implantation de cet agent de biocontrôle en pépinière et au vignoble, l’aptitude de P. oligandrum à coloniser les racines de plants de vignes greffés et à les protéger contre P. chlamydospora a été étudiée. Trois portes-greffes (SO4, 3309 et 101-14) greffés sur des cépages (Cabernet Sauvignon et Sauvignon Blanc) ont été inoculés ou non par P. oligandrum. L’oomycète s’implantait sur les différents systèmes racinaires, mais en proportion variable selon les associations cépage/porte-greffe utilisées. Les analyses par empreintes moléculaires (Single Strand Conformation Polymorphism) ont montré que des microflores fongiques et bactériennes complexes et diversifiées colonisaient les feuilles et les racines, mais que l’introduction de P. oligandrum sur la plante n’induisait pas de bouleversements directs ou indirects notables au niveau de ces microflores indigènes. Une protection des jeunes plants de vigne greffés (SO4 + Cabernet Sauvignon) semble être induite par P. oligandrum contre l’agent pathogène, P. chlamydospora. / Approximately 13% of French vineyards are currently considered unproductive due to trunk diseases, mainly Esca, a particularly destructive disease that affects grapevines worldwide. Accordingly, biological control of a pathogen implicated in Esca, Phaeomoniella chlamydospora, was developed using the oomycete, Pythium oligandrum. The selection of P. oligandrum strains, isolated from vineyards, which produced in vitro large quantities of oligandrin, an elicitin-like protein inducing plant defences, was carried out. Three greenhouse assays showed that the necroses caused by P. chlamydospora were significantly reduced (40 to 50%) when P. oligandrum colonized the root system of vine cuttings. At stem level, the expression of a set of 22 genes involved in Vitis vinifera defence mechanisms was measured by quantitative PCR. Depending on the treatments employed, significant differences in grapevine responses were observed. Six of the genes (PR proteins, phenyl-propanoid pathway, oxylipins and the oxydo-reduction system) were strongly induced in plants pre-treated with P. oligandrum, and subsequently infected by P. chlamydospora. In order to characterize the mechanisms occurring during this tri-partite interaction, the global transcriptomic grapevine responses at stem level were analysed, using microarray and RNAseq, in plants in which induced systemic resistance (ISR) had taken place. Several genes involved in ethylene and jasmonate biosynthesis were strongly induced in plants that were pre-treated with P. oligandrum, and subsequently infected by P. chlamydospora. The transcription factors involved in the regulation of these signalisation pathways were also induced. Analysis of the P. chlamydospora RNA messenger (mRNA), showed that certain genes involved in secondary metabolite synthesis, transcription factors implicated in pathway regulations, and certain Carbohydrate Active enZymes, were modulated, when P. oligandrum colonised the roots. These results demonstrated that root inoculation with P. oligandrum induced indirect stress on P. chlamydospora responses. In order to promote P. oligandrum implantation in nurseries and vineyards, the capacity of this biocontrol agent to colonize the roots of grafted-plants, and to protect them against P. chlamydospora attacks, was studied. Three rootstocks (SO4, 3309 and 101-14), grafted on two scion varieties (Cabernet Sauvignon and Sauvignon Blanc), were inoculated or not with P. oligandrum. Depending on the particular scion/rootstock associations, the oomycete colonized the various root systems differently. Single Strand Conformation Polymorphism (SSCP) analyses revealed complex and diverse fungal and bacterial communities in both the rhizosphere and the phyllosphere. These microflora, which were organ-dependent, were not direcly or indirectly affected by the root inoculation of P. oligandrum. Protection of grafted vines (SO4 + Cabernet Sauvignon) was probably induced by P. oligandrum against the pathogen, P. chlamydospora.

Resumo: O controle químico tem sido utilizado freqüentemente com baixa eficiência para o fungo Didymella bryoniae, causador da doença crestamento gomoso ou cancro da haste em meloeiro. Porém, alternativas de controle como uso da enxertia e manipulação da nutrição devem ser estudadas. Avaliou-se porta-enxertos e concentrações de potássio na resistência de meloeiro rendilhado a Didymella bryoniae em ambiente protegido. No primeiro experimento, quatro porta-enxertos (melão „Dinero‟, melancia „Ojakkyo‟, abóbora „Strong Tosa‟ e cabaça „Calabash TI-191‟) foram inoculados com discos de micélio (7 mm de diâmetro) de quatro isolados de Didymella bryoniae (Dbr 34, Dbr 36, Dbr 37 e Dbr 39) em caule previamente ferido. Baseado no tamanho da lesão, o porta-enxerto „Dinero‟ foi susceptível, „Strong Tosa‟ moderadamente resistente, „Ojakkyo‟ e „Calabash TI-191‟ resistentes e o isolado Dbr 37 se mostrou mais agressivo dentre os isolados. No segundo experimento, o híbrido de meloeiro „Bônus II‟ foi enxertado nos porta-enxertos „Dinero‟ e „Strong Tosa‟, inoculadas com o isolado Dbr 37 do fungo e submetidas a diferentes concentrações de potássio (0; 62,5; 125; 187,5; 250 mg L-1), tanto plantas enxertadas como pé-franco. As plantas do híbrido „Bônus II‟ enxertadas foram resistentes ao fungo e as pé-franco susceptíveis. As concentrações de potássio não influenciaram no tamanho da lesão e na sobrevivência das plantas, porém influenciaram na condutância estomática e transpiração das plantas. / Abstract: Chemical control of the fungus Didymella bryoniae, causal agent of gummy stem blight of melon, is frequently inefficient. Alternative methods as grafting on resistant rootstocks and nutrition handling must be studied. Different rootstocks and potassium concentrations were tested to control the disease on net melon grown under plastic house conditions. In a first experiment four rootstocks (melon „Dinero‟, watermelon „Ojakkyo‟, squash „Strong Tosa‟ and calabash „TI-191‟) were tested for resistance inoculated by disks mycelium (7 mm diameter) with four isolates ( Dbr 34, Dbr 36, Dbr 37 and Dbr 39) of D. bryoniae in stem previously injured. Based on lesion size „Dinero‟ proved to be susceptible to the fungus, „Strong Tosa‟ moderately resistant and „Ojakkyo‟ and „TI-191‟ resistant and the isolated Dbr 37 proved more aggressive among isolates. In a second experiment hybrid net melon „Bonus II‟ was grafted on rootstocks „Dinero‟ and „Strong Tosa‟, inoculated with isolate Dbr 37 of the fungus and submitted to different potassium concentration (0; 62,5; 125; 187,5; 250 mg L-1), inoculated both grafted plants as non grafted. Grafted plants of „Bonus II‟ were resistant to the fungus and the non grafted ones susceptible. Potassium concentrations did not influenced size of the lesion on the stem and also in the plants survival, however influence on stomatal conductance and transpiration plants. / Orientador: Rumy Goto / Coorientador: Edson Luiz Furtado / Coorientador: Dirceu Maximino Fernandes / Banca: César Júnor Bueno / Banca: Haydée Siqueira Santos / Mestre